CNTNAP1 29062

Name: CNTNAP1	Sequence: fasta or formatted (1384aa)		NCBI GI: 4505463
Description: contactin associated protein 1 precursor		Referenced in: Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 86 2 C cysteine 2.6 36 1 D aspartate 5.3 74 2 E glutamate 4.8 67 2 F phenylalanine 5.3 74 2 G glycine 8.8 122 2 H histidine 3.3 46 1 I isoleucine 3.3 45 1 K lysine 1.9 26 2 L leucine 9.5 131 3 M methionine 1.4 20 2 N asparagine 4.3 59 2 P proline 7.1 98 2 Q glutamine 3.2 44 1 R arginine 7.7 106 2 S serine 6.4 88 2 T threonine 5.0 69 2 V valine 6.8 94 2 W tryptophan 2.1 29 1 Y tyrosine 5.1 70 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 contactin associated protein 1 precursor CNTNAP2 0.386 cell recognition molecule Caspr2 precursor CNTNAP5 0.314 contactin associated protein-like 5 CNTNAP4 0.312 cell recognition protein CASPR4 isoform 1 LOC389722 0.296 PREDICTED: hypothetical protein LOC389722 isoform 1... CNTNAP4 0.295 cell recognition protein CASPR4 isoform 2 CNTNAP3 0.294 cell recognition molecule CASPR3 LOC389722 0.235 PREDICTED: hypothetical protein LOC389722 isoform 2... LOC643827 0.110 PREDICTED: similar to cell recognition molecule CAS... LOC642406 0.076 PREDICTED: similar to contactin associated protein-... NRXN1 0.038 neurexin 1 isoform alpha1 precursor NRXN2 0.037 neurexin 2 isoform alpha-2 precursor NRXN1 0.036 neurexin 1 isoform alpha2 precursor NRXN2 0.036 neurexin 2 isoform alpha-1 precursor NRXN3 0.031 neurexin 3 isoform 1 precursor FLJ37512 0.027 PREDICTED: novel protein similar to contactin assoc... CELSR2 0.017 cadherin EGF LAG seven-pass G-type receptor 2 CELSR1 0.016 cadherin EGF LAG seven-pass G-type receptor 1 LAMA1 0.015 laminin, alpha 1 precursor F8 0.015 coagulation factor VIII isoform b precursor F8 0.015 coagulation factor VIII isoform a precursor F5 0.015 coagulation factor V precursor RS1 0.015 X-linked juvenile retinoschisis protein precursor [H... CPXM2 0.015 carboxypeptidase X (M14 family), member 2 HSPG2 0.015 heparan sulfate proteoglycan 2 LOC389722 0.014 PREDICTED: similar to cell recognition molecule CAS... NRP2 0.014 neuropilin 2 isoform 3 precursor NRP2 0.014 neuropilin 2 isoform 5 precursor NRP2 0.014 neuropilin 2 isoform 1 precursor NRP2 0.014 neuropilin 2 isoform 6 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.