Guide to the Human Genome
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Name: EPN1 Sequence: fasta or formatted (550aa) NCBI GI: 41350201
Description:

epsin 1 isoform c

Referenced in:

Additional Membrane Functions

Other entries for this name:
alt prot [576aa] epsin 1 isoform b
alt prot [662aa] epsin 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         64           3
 C cysteine            0.2          1           1
 D aspartate           5.5         30           2
 E glutamate           6.4         35           3
 F phenylalanine       2.2         12           1
 G glycine             9.5         52           3
 H histidine           0.7          4           1
 I isoleucine          1.6          9           1
 K lysine              3.6         20           1
 L leucine             7.3         40           2
 M methionine          2.7         15           2
 N asparagine          2.7         15           1
 P proline            14.9         82           3
 Q glutamine           2.9         16           2
 R arginine            4.5         25           2
 S serine              8.7         48           3
 T threonine           6.7         37           2
 V valine              4.7         26           2
 W tryptophan          2.2         12           1
 Y tyrosine            1.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epsin 1 isoform c 
EPN1                  0.995   epsin 1 isoform a 
EPN1                  0.983   epsin 1 isoform b 
EPN2                  0.416   epsin 2 isoform a 
EPN3                  0.351   epsin 3 
EPN2                  0.346   epsin 2 isoform b 
ENTHD1                0.167   ENTH domain containing 1 
EPN2                  0.147   epsin 2 isoform c 
CLINT1                0.130   epsin 4 
NACA                  0.058   nascent polypeptide-associated complex alpha subuni...
MLL2                  0.051   myeloid/lymphoid or mixed-lineage leukemia 2 
SRCAP                 0.046   Snf2-related CBP activator protein 
TAF4                  0.045   TBP-associated factor 4 
FLJ22184              0.043   PREDICTED: hypothetical protein LOC80164 
SETD1B                0.042   SET domain containing 1B 
TPRX1                 0.042   tetra-peptide repeat homeobox 
SF1                   0.041   splicing factor 1 isoform 2 
MUC2                  0.041   mucin 2 precursor 
NCOR2                 0.041   nuclear receptor co-repressor 2 isoform 1 
LMTK3                 0.041   lemur tyrosine kinase 3 
FLJ22184              0.040   PREDICTED: hypothetical protein FLJ22184 
KIAA0754              0.040   hypothetical protein LOC643314 
NCOR2                 0.040   nuclear receptor co-repressor 2 isoform 2 
BAT2                  0.040   HLA-B associated transcript-2 
SF1                   0.040   splicing factor 1 isoform 1 
SMARCA4               0.039   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.039   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.039   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.039   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.039   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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