Guide to the Human Genome
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Name: FBLN5 Sequence: fasta or formatted (448aa) NCBI GI: 19743803
Description:

fibulin 5 precursor

Referenced in:

Extracellular Matrix

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         16           3
 C cysteine            9.2         41           1
 D aspartate           6.2         28           2
 E glutamate           5.6         25           2
 F phenylalanine       3.1         14           1
 G glycine             7.4         33           2
 H histidine           1.1          5           1
 I isoleucine          6.2         28           1
 K lysine              0.9          4           1
 L leucine             5.8         26           2
 M methionine          2.5         11           2
 N asparagine          6.0         27           1
 P proline             7.8         35           2
 Q glutamine           6.0         27           2
 R arginine            6.0         27           1
 S serine              6.0         27           2
 T threonine           6.2         28           2
 V valine              4.2         19           2
 W tryptophan          0.2          1           1
 Y tyrosine            5.8         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibulin 5 precursor 
EFEMP2                0.491   EGF-containing fibulin-like extracellular matrix pr...
EFEMP1                0.409   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.409   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.409   EGF-containing fibulin-like extracellular matrix prot...
FBLN1                 0.261   fibulin 1 isoform C precursor 
FBLN2                 0.248   fibulin 2 isoform b precursor 
FBLN2                 0.248   fibulin 2 isoform a precursor 
FBLN1                 0.235   fibulin 1 isoform D 
FBLN1                 0.217   fibulin 1 isoform B precursor 
FBLN1                 0.217   fibulin 1 isoform A precursor 
LTBP1                 0.176   latent transforming growth factor beta binding prote...
LTBP1                 0.176   latent transforming growth factor beta binding prote...
FBN2                  0.166   fibrillin 2 precursor 
FBN1                  0.165   fibrillin 1 precursor 
FBN3                  0.163   fibrillin 3 precursor 
HMCN2                 0.161   PREDICTED: hemicentin 2 
HMCN2                 0.161   PREDICTED: hemicentin 2 
HMCN2                 0.161   PREDICTED: hemicentin 2 
LTBP3                 0.158   latent transforming growth factor beta binding prot...
LTBP3                 0.158   latent transforming growth factor beta binding prote...
HMCN1                 0.158   hemicentin 1 
MATN2                 0.153   matrilin 2 isoform b precursor 
MATN2                 0.153   matrilin 2 isoform a precursor 
LTBP4                 0.152   latent transforming growth factor beta binding prot...
LTBP4                 0.152   latent transforming growth factor beta binding prot...
LTBP4                 0.152   latent transforming growth factor beta binding prot...
LTBP2                 0.148   latent transforming growth factor beta binding protei...
MEGF6                 0.139   EGF-like-domain, multiple 3 
SCUBE1                0.138   signal peptide, CUB domain, EGF-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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