Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: WFDC10A Sequence: fasta or formatted (79aa) NCBI GI: 21703706
Description:

WAP four-disulfide core domain 10A precursor

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8          3           1
 C cysteine           11.4          9           2
 D aspartate           2.5          2           1
 E glutamate           2.5          2           1
 F phenylalanine       0.0          0           0
 G glycine             3.8          3           2
 H histidine           2.5          2           1
 I isoleucine          3.8          3           1
 K lysine              7.6          6           2
 L leucine            15.2         12           3
 M methionine          3.8          3           1
 N asparagine          3.8          3           2
 P proline             5.1          4           1
 Q glutamine          11.4          9           3
 R arginine            3.8          3           1
 S serine              5.1          4           1
 T threonine           3.8          3           1
 V valine              6.3          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAP four-disulfide core domain 10A precursor 
WFDC10B               0.568   WAP four-disulfide core domain 10B isoform a precurs...
WFDC10B               0.253   WAP four-disulfide core domain 10B isoform b 
WFDC13                0.137   WAP four-disulfide core domain 13 precursor 
WFDC11                0.130   WAP four-disulfide core domain 11 precursor 
WFDC9                 0.123   protease inhibitor WAP9 
WFDC3                 0.082   WAP four-disulfide core domain 3 precursor 
SPINLW1               0.075   serine peptidase inhibitor-like, with Kunitz and WAP...
WFIKKN1               0.048   WAP, follistatin/kazal, immunoglobulin, kunitz and n...
WFDC2                 0.048   WAP four-disulfide core domain 2 precursor 
WFDC5                 0.041   WAP four-disulfide core domain 5 precursor 
SPINLW1               0.034   serine peptidase inhibitor-like, with Kunitz and WAP...
WFDC8                 0.034   WAP four-disulfide core domain 8 precursor 
WFDC8                 0.034   WAP four-disulfide core domain 8 precursor 
KAL1                  0.034   Kallmann syndrome 1 protein precursor 
VWDE                  0.027   von Willebrand factor D and EGF domains 
WFIKKN2               0.021   WFIKKN2 protein 
KRT78                 0.021   keratin 5b 
SLPI                  0.021   secretory leukocyte peptidase inhibitor precursor [Ho...
MEGF8                 0.021   multiple EGF-like-domains 8 
INSR                  0.014   insulin receptor isoform Short precursor 
INSR                  0.014   insulin receptor isoform Long precursor 
FBXO33                0.014   F-box protein 33 
WFDC6                 0.014   WAP four-disulfide core domain 6 precursor 
WFDC12                0.014   WAP four-disulfide core domain 12 precursor 
LOC645277             0.007   PREDICTED: hypothetical protein 
LOC645277             0.007   PREDICTED: hypothetical protein 
NFXL1                 0.007   nuclear transcription factor, X-box binding-like 1 [...
COL2A1                0.007   collagen, type II, alpha 1 isoform 1 precursor [Hom...
LTBP1                 0.007   latent transforming growth factor beta binding prote...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press