Guide to the Human Genome
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Search of human proteins with 21618329

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21618329 forkhead box I1 isoform b [Homo sapiens]
         (283 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21618329 forkhead box I1 isoform b [Homo sapiens]                  604   e-173
gi|21618327 forkhead box I1 isoform a [Homo sapiens]                  413   e-116
gi|195947376 forkhead box I2 [Homo sapiens]                           192   3e-49
gi|208431824 forkhead box I3 [Homo sapiens]                           177   7e-45
gi|119395716 forkhead box C1 [Homo sapiens]                           114   7e-26
gi|22779860 forkhead box L1 [Homo sapiens]                            114   1e-25
gi|32307177 forkhead box G1 [Homo sapiens]                            113   2e-25
gi|4885237 forkhead box C2 [Homo sapiens]                             110   1e-24
gi|50345831 forkhead box J3 [Homo sapiens]                            106   3e-23
gi|12751477 forkhead box L2 [Homo sapiens]                            104   1e-22
gi|8923842 forkhead box J2 [Homo sapiens]                             102   5e-22
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                  100   2e-21
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                 100   2e-21
gi|28973785 forkhead box S1 [Homo sapiens]                             99   5e-21
gi|11386197 forkhead box E3 [Homo sapiens]                             98   9e-21
gi|134142824 forkhead box D2 [Homo sapiens]                            97   2e-20
gi|4758392 forkhead box D1 [Homo sapiens]                              97   2e-20
gi|6912372 forkhead box D3 [Homo sapiens]                              97   2e-20
gi|24497501 forkhead box A1 [Homo sapiens]                             96   3e-20
gi|21618325 forkhead box E1 [Homo sapiens]                             96   3e-20
gi|24497506 forkhead box A3 [Homo sapiens]                             96   4e-20
gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]      95   8e-20
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]      95   8e-20
gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]      95   8e-20
gi|105554437 forkhead box B1 [Homo sapiens]                            94   1e-19
gi|110735445 forkhead box F1 [Homo sapiens]                            93   2e-19
gi|18959276 forkhead box D4-like 1 [Homo sapiens]                      92   4e-19
gi|4557595 forkhead box F2 [Homo sapiens]                              92   7e-19
gi|31563338 forkhead box K2 [Homo sapiens]                             92   7e-19
gi|157042770 forkhead box D4-like 3 [Homo sapiens]                     91   9e-19

>gi|21618329 forkhead box I1 isoform b [Homo sapiens]
          Length = 283

 Score =  604 bits (1558), Expect = e-173
 Identities = 283/283 (100%), Positives = 283/283 (100%)

Query: 1   MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPN 60
           MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPN
Sbjct: 1   MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPN 60

Query: 61  PYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMK 120
           PYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMK
Sbjct: 61  PYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMK 120

Query: 121 LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC 180
           LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC
Sbjct: 121 LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC 180

Query: 181 FKKVPRDEDDPAYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNLSNHSGGG 240
           FKKVPRDEDDPAYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNLSNHSGGG
Sbjct: 181 FKKVPRDEDDPAYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNLSNHSGGG 240

Query: 241 DWANPMPTNMLSYGGSVLSQFSPHFYNSVNTSGVLYPREGTEV 283
           DWANPMPTNMLSYGGSVLSQFSPHFYNSVNTSGVLYPREGTEV
Sbjct: 241 DWANPMPTNMLSYGGSVLSQFSPHFYNSVNTSGVLYPREGTEV 283


>gi|21618327 forkhead box I1 isoform a [Homo sapiens]
          Length = 378

 Score =  413 bits (1062), Expect = e-116
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPN 60
           MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPN
Sbjct: 1   MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPN 60

Query: 61  PYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMK 120
           PYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMK
Sbjct: 61  PYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMK 120

Query: 121 LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC 180
           LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC
Sbjct: 121 LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC 180

Query: 181 FKKVPRDEDDP 191
           FKKVPRDEDDP
Sbjct: 181 FKKVPRDEDDP 191



 Score =  195 bits (496), Expect = 3e-50
 Identities = 92/92 (100%), Positives = 92/92 (100%)

Query: 192 AYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNLSNHSGGGDWANPMPTNML 251
           AYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNLSNHSGGGDWANPMPTNML
Sbjct: 287 AYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNLSNHSGGGDWANPMPTNML 346

Query: 252 SYGGSVLSQFSPHFYNSVNTSGVLYPREGTEV 283
           SYGGSVLSQFSPHFYNSVNTSGVLYPREGTEV
Sbjct: 347 SYGGSVLSQFSPHFYNSVNTSGVLYPREGTEV 378


>gi|195947376 forkhead box I2 [Homo sapiens]
          Length = 318

 Score =  192 bits (488), Expect = 3e-49
 Identities = 92/146 (63%), Positives = 106/146 (72%), Gaps = 1/146 (0%)

Query: 47  PSFEGGGEYGATPNPYLWFNGPTMTPPPYLPGPN-ASPFLPQAYGVQRPLLPSVSGLGGS 105
           P +E G        P LW N P ++P  Y  GP  A P+   +YG   PLL +  GL G+
Sbjct: 25  PGYEPGDLGAVGGGPLLWVNAPALSPKSYASGPGPAPPYAAPSYGAPGPLLGAPGGLAGA 84

Query: 106 DLGWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKA 165
           DL WL +  Q+EL++LVRPPYSYSALIAMAI  AP ++LTLSQIYQYVA NFPFY +SKA
Sbjct: 85  DLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKA 144

Query: 166 GWQNSIRHNLSLNDCFKKVPRDEDDP 191
           GWQNSIRHNLSLNDCFKKVPRDEDDP
Sbjct: 145 GWQNSIRHNLSLNDCFKKVPRDEDDP 170


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score =  177 bits (450), Expect = 7e-45
 Identities = 100/187 (53%), Positives = 114/187 (60%), Gaps = 36/187 (19%)

Query: 40  GVPSPQRPSFEGGGEYGATP----NPYLWFNGPTM-----------------TPPPYLPG 78
           G P   R  + G  +Y A P    NPYLW NGP +                  PPP  PG
Sbjct: 28  GAPPAARAPY-GLADYAAPPAAAANPYLWLNGPGVGGPPSAAAAAAAAYLGAPPPPPPPG 86

Query: 79  PNASPFL--PQAYGV----QRPLLPSVSGL--------GGSDLGWLPIPSQEELMKLVRP 124
             A PFL  P A G     QRP                G  +LGWL + S+E+LMK+VRP
Sbjct: 87  AAAGPFLQPPPAAGTFGCSQRPFAQPAPAAPASPAAPAGPGELGWLSMASREDLMKMVRP 146

Query: 125 PYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKV 184
           PYSYSALIAMAI  AP+++LTLS IYQ+VAD+FPFY +SKAGWQNSIRHNLSLNDCFKKV
Sbjct: 147 PYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKV 206

Query: 185 PRDEDDP 191
           PRDEDDP
Sbjct: 207 PRDEDDP 213



 Score = 33.1 bits (74), Expect = 0.28
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)

Query: 230 LTNLSNHSGG--GDWANPMPTNMLSYGGSVLSQFSPHFYNSVNTSGVLYPREGTEV 283
           L+N +++S G    + +P P    S  G   S FS  F+N    + ++YPREG+EV
Sbjct: 368 LSNSTSNSTGQRSSYYSPFPA---STSGGQSSPFSSPFHNFSMVNSLIYPREGSEV 420


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score =  114 bits (286), Expect = 7e-26
 Identities = 52/89 (58%), Positives = 64/89 (71%)

Query: 103 GGSDLGWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNK 162
           GG    + P   Q +   +V+PPYSY ALI MAI  APDK++TL+ IYQ++ D FPFY  
Sbjct: 58  GGMARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRD 117

Query: 163 SKAGWQNSIRHNLSLNDCFKKVPRDEDDP 191
           +K GWQNSIRHNLSLN+CF KVPRD+  P
Sbjct: 118 NKQGWQNSIRHNLSLNECFVKVPRDDKKP 146


>gi|22779860 forkhead box L1 [Homo sapiens]
          Length = 345

 Score =  114 bits (284), Expect = 1e-25
 Identities = 62/118 (52%), Positives = 78/118 (66%), Gaps = 7/118 (5%)

Query: 74  PYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMKLVRPPYSYSALIA 133
           P LP   ASP L   YG +RP LP    L  +    L    + E  +  +PPYSY ALIA
Sbjct: 7   PRLPALAASPML-YLYGPERPGLP----LAFAPAAALAASGRAETPQ--KPPYSYIALIA 59

Query: 134 MAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDP 191
           MAI  AP++R+TL+ IYQ++ D FPFY+ ++ GWQNSIRHNLSLNDCF KVPR++  P
Sbjct: 60  MAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRP 117


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score =  113 bits (283), Expect = 2e-25
 Identities = 99/307 (32%), Positives = 134/307 (43%), Gaps = 54/307 (17%)

Query: 9   PSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPNPYLWFNGP 68
           P PP   P  P   Q+PP           P   P+PQ P   G         P      P
Sbjct: 58  PPPPAPQPPPPPQQQQPP-----------PPPPPAPQPPQTRGAPAADDDKGPQQLLLPP 106

Query: 69  TMTPPPY--LPGPNASPFLPQAY-----GVQRPLLPSV--------------SGLGGSDL 107
              PPP   L G  A     +       G   P+ P                +G GG D 
Sbjct: 107 PPPPPPAAALDGAKADGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEGGKD- 165

Query: 108 GWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGW 167
           G      +++  K  +PP+SY+ALI MAI  +P+KRLTL+ IY+++  NFP+Y ++K GW
Sbjct: 166 GEGGKEGEKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGW 225

Query: 168 QNSIRHNLSLNDCFKKVPRDEDDPAYVSGG----SPTSHPLVTPGLSPE--PSDKTGQNS 221
           QNSIRHNLSLN CF KVPR  DDP    G      P+S  +   G + +      T +  
Sbjct: 226 QNSIRHNLSLNKCFVKVPRHYDDPG--KGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAK 283

Query: 222 LTFNSFSPLTN----LSNHSGGGDWA--------NPMPTNMLSYGGSVLSQFS-PHFYNS 268
           L F   + LT+      + +G   W         +P  ++ LSY G+  +  S P  Y+S
Sbjct: 284 LAFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSAYPSHPMPYSS 343

Query: 269 VNTSGVL 275
           V T   L
Sbjct: 344 VLTQNSL 350


>gi|4885237 forkhead box C2 [Homo sapiens]
          Length = 501

 Score =  110 bits (276), Expect = 1e-24
 Identities = 48/71 (67%), Positives = 59/71 (83%)

Query: 121 LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC 180
           LV+PPYSY ALI MAI  AP+K++TL+ IYQ++ D FPFY ++K GWQNSIRHNLSLN+C
Sbjct: 70  LVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNEC 129

Query: 181 FKKVPRDEDDP 191
           F KVPRD+  P
Sbjct: 130 FVKVPRDDKKP 140


>gi|50345831 forkhead box J3 [Homo sapiens]
          Length = 622

 Score =  106 bits (264), Expect = 3e-23
 Identities = 47/79 (59%), Positives = 64/79 (81%), Gaps = 2/79 (2%)

Query: 115 QEELM--KLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIR 172
           QEE+   K  +PPYSY++LI  AI+ +P K++TLS+IYQ++ DNFP+Y ++ +GW+NSIR
Sbjct: 68  QEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIR 127

Query: 173 HNLSLNDCFKKVPRDEDDP 191
           HNLSLN CF KVPR +DDP
Sbjct: 128 HNLSLNKCFLKVPRSKDDP 146


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score =  104 bits (259), Expect = 1e-22
 Identities = 53/87 (60%), Positives = 61/87 (70%), Gaps = 7/87 (8%)

Query: 101 GLGGSDLGWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFY 160
           G GG      P P+Q       +PPYSY ALIAMAI  + +KRLTLS IYQY+   FPFY
Sbjct: 39  GGGGGTAPEKPDPAQ-------KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFY 91

Query: 161 NKSKAGWQNSIRHNLSLNDCFKKVPRD 187
            K+K GWQNSIRHNLSLN+CF KVPR+
Sbjct: 92  EKNKKGWQNSIRHNLSLNECFIKVPRE 118


>gi|8923842 forkhead box J2 [Homo sapiens]
          Length = 574

 Score =  102 bits (253), Expect = 5e-22
 Identities = 47/99 (47%), Positives = 66/99 (66%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +P YSY+ LI  AI+ +P K++TLS+IY+++ DNFP+Y  +  GW+NSIRHNLSLN CF+
Sbjct: 66  KPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFR 125

Query: 183 KVPRDEDDPAYVSGGSPTSHPLVTPGLSPEPSDKTGQNS 221
           KVPR  DDP   S  +  + P ++      P D   Q+S
Sbjct: 126 KVPRPRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDS 164


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 2/81 (2%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +PPYSY +LI MAI  +P+K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct: 159 KPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFL 218

Query: 183 KVPRDEDDPAYVSGGSPTSHP 203
           KVPR  D P    G   T HP
Sbjct: 219 KVPRSPDKPG--KGSFWTLHP 237


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 2/81 (2%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +PPYSY +LI MAI  +P+K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct: 165 KPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFL 224

Query: 183 KVPRDEDDPAYVSGGSPTSHP 203
           KVPR  D P    G   T HP
Sbjct: 225 KVPRSPDKPG--KGSFWTLHP 243


>gi|28973785 forkhead box S1 [Homo sapiens]
          Length = 330

 Score = 98.6 bits (244), Expect = 5e-21
 Identities = 44/69 (63%), Positives = 53/69 (76%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +PPYSY ALIAMAI  +P +R TLS IY+Y+   F FY  ++ GWQNSIRHNLSLN+CF 
Sbjct: 18  KPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFV 77

Query: 183 KVPRDEDDP 191
           KVPRD+  P
Sbjct: 78  KVPRDDRKP 86


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score = 97.8 bits (242), Expect = 9e-21
 Identities = 55/136 (40%), Positives = 74/136 (54%), Gaps = 8/136 (5%)

Query: 60  NPYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPS----Q 115
           +P   F+G    P     GP  SP      G +    P  +  G  +    P P     +
Sbjct: 8   DPPAAFSGFPALPAVAPSGPPPSPLA----GAEPGREPEEAAAGRGEAAPTPAPGPGRRR 63

Query: 116 EELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNL 175
              ++  +PPYSY ALIAMA+  AP +RLTL+ IY+++ + F FY  S   WQNSIRHNL
Sbjct: 64  RRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNL 123

Query: 176 SLNDCFKKVPRDEDDP 191
           +LNDCF KVPR+  +P
Sbjct: 124 TLNDCFVKVPREPGNP 139


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 43/71 (60%), Positives = 55/71 (77%)

Query: 121 LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC 180
           LV+PPYSY ALI MAI  +P KRLTLS+I ++++  FP+Y +    WQNSIRHNLSLNDC
Sbjct: 125 LVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDC 184

Query: 181 FKKVPRDEDDP 191
           F K+PR+  +P
Sbjct: 185 FVKIPREPGNP 195


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 43/71 (60%), Positives = 55/71 (77%)

Query: 121 LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC 180
           LV+PPYSY ALI MAI  +P KRLTLS+I ++++  FP+Y +    WQNSIRHNLSLNDC
Sbjct: 123 LVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDC 182

Query: 181 FKKVPRDEDDP 191
           F K+PR+  +P
Sbjct: 183 FVKIPREPGNP 193


>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 2/91 (2%)

Query: 101 GLGGSDLGWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFY 160
           G G    G L  PS+ +   LV+PPYSY ALI MAI  +P K+LTLS I +++++ FP+Y
Sbjct: 121 GAGSGSAGGLA-PSKPK-NSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYY 178

Query: 161 NKSKAGWQNSIRHNLSLNDCFKKVPRDEDDP 191
            +    WQNSIRHNLSLNDCF K+PR+  +P
Sbjct: 179 REKFPAWQNSIRHNLSLNDCFVKIPREPGNP 209


>gi|24497501 forkhead box A1 [Homo sapiens]
          Length = 472

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 2/81 (2%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +PPYSY +LI MAI  AP K LTLS+IYQ++ D FP+Y +++  WQNSIRH+LS NDCF 
Sbjct: 170 KPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFV 229

Query: 183 KVPRDEDDPAYVSGGSPTSHP 203
           KV R  D P    G   T HP
Sbjct: 230 KVARSPDKPG--KGSYWTLHP 248


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +PPYSY ALIAMAI  AP++RLTL  IY+++ + FPFY  +   WQNSIRHNL+LNDCF 
Sbjct: 53  KPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFL 112

Query: 183 KVPRDEDDP 191
           K+PR+   P
Sbjct: 113 KIPREAGRP 121


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 64/149 (42%), Positives = 77/149 (51%), Gaps = 20/149 (13%)

Query: 58  TPNPYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLG---GSDLGWLPIPS 114
           T NP      P   P   LP    +P  P A     PL P+  GLG   GS       P 
Sbjct: 42  TLNPLSSPYPPGGLPASPLPSGPLAPPAPAA-----PLGPTFPGLGVSGGSSSSGYGAPG 96

Query: 115 Q-----EELMKLVR-------PPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNK 162
                 +E+ K  R       PPYSY +LI MAI  AP K LTLS+IYQ++ D FP+Y +
Sbjct: 97  PGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRE 156

Query: 163 SKAGWQNSIRHNLSLNDCFKKVPRDEDDP 191
           ++  WQNSIRH+LS NDCF KV R  D P
Sbjct: 157 NQQRWQNSIRHSLSFNDCFVKVARSPDKP 185


>gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 632

 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 45/78 (57%), Positives = 54/78 (69%)

Query: 111 PIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNS 170
           P  S +E  +L RP YSY ALIAMAI  +P  R+TLS IY ++   FP+Y  ++  WQNS
Sbjct: 20  PAGSSDEDKRLTRPAYSYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNS 79

Query: 171 IRHNLSLNDCFKKVPRDE 188
           IRHNLSLN CF KVPR E
Sbjct: 80  IRHNLSLNSCFVKVPRSE 97


>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 528

 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 45/78 (57%), Positives = 54/78 (69%)

Query: 111 PIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNS 170
           P  S +E  +L RP YSY ALIAMAI  +P  R+TLS IY ++   FP+Y  ++  WQNS
Sbjct: 315 PAGSSDEDKRLTRPAYSYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNS 374

Query: 171 IRHNLSLNDCFKKVPRDE 188
           IRHNLSLN CF KVPR E
Sbjct: 375 IRHNLSLNSCFVKVPRSE 392


>gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 387

 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 45/78 (57%), Positives = 54/78 (69%)

Query: 111 PIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNS 170
           P  S +E  +L RP YSY ALIAMAI  +P  R+TLS IY ++   FP+Y  ++  WQNS
Sbjct: 82  PAGSSDEDKRLTRPAYSYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNS 141

Query: 171 IRHNLSLNDCFKKVPRDE 188
           IRHNLSLN CF KVPR E
Sbjct: 142 IRHNLSLNSCFVKVPRSE 159


>gi|105554437 forkhead box B1 [Homo sapiens]
          Length = 325

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 39/69 (56%), Positives = 52/69 (75%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +PPYSY +L AMAI  +P+K L LS+IY+++ D FP+Y ++   WQNS+RHNLS NDCF 
Sbjct: 13  KPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFI 72

Query: 183 KVPRDEDDP 191
           K+PR  D P
Sbjct: 73  KIPRRPDQP 81


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +PPYSY ALI MAI  +P KRLTLS+IYQ++   FPF+  S  GW+NS+RHNLSLN+CF 
Sbjct: 48  KPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFI 107

Query: 183 KVPR 186
           K+P+
Sbjct: 108 KLPK 111


>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
          Length = 408

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 42/78 (53%), Positives = 54/78 (69%)

Query: 114 SQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRH 173
           + E+  +  +PPYSY ALI MAI  +P KRLTLS I  +++  FP+Y +    WQNSIRH
Sbjct: 98  ASEDARQPAKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRH 157

Query: 174 NLSLNDCFKKVPRDEDDP 191
           NLSLNDCF K+PR+   P
Sbjct: 158 NLSLNDCFVKIPREPGHP 175


>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score = 91.7 bits (226), Expect = 7e-19
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182
           +PPYSY ALI MAI  +P KRLTLS+IYQ++   FPF+  +  GW+NS+RHNLSLN+CF 
Sbjct: 100 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 159

Query: 183 KVPR 186
           K+P+
Sbjct: 160 KLPK 163


>gi|31563338 forkhead box K2 [Homo sapiens]
          Length = 660

 Score = 91.7 bits (226), Expect = 7e-19
 Identities = 54/134 (40%), Positives = 72/134 (53%), Gaps = 13/134 (9%)

Query: 68  PTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMKLV----- 122
           P  +P   +   N+ P  P+  G        V  +  SDL  +   SQ E  K       
Sbjct: 196 PLPSPTGTISAANSCPSSPRGAGSSGY---KVGRVMPSDLNLMADNSQPENEKEASGGDS 252

Query: 123 -----RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSL 177
                +PPYSY+ LI  AI  APDK+LTL+ IY ++  N+P+Y  +  GWQNSIRHNLSL
Sbjct: 253 PKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSL 312

Query: 178 NDCFKKVPRDEDDP 191
           N  F KVPR +++P
Sbjct: 313 NRYFIKVPRSQEEP 326


>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
          Length = 417

 Score = 91.3 bits (225), Expect = 9e-19
 Identities = 42/78 (53%), Positives = 53/78 (67%)

Query: 114 SQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRH 173
           + E+  +  +PPYSY ALI MAI   P KRLTLS I  +++  FP+Y +    WQNSIRH
Sbjct: 99  ASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRH 158

Query: 174 NLSLNDCFKKVPRDEDDP 191
           NLSLNDCF K+PR+   P
Sbjct: 159 NLSLNDCFVKIPREPGHP 176


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.135    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,466,389
Number of Sequences: 37866
Number of extensions: 996098
Number of successful extensions: 3394
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 3008
Number of HSP's gapped (non-prelim): 578
length of query: 283
length of database: 18,247,518
effective HSP length: 101
effective length of query: 182
effective length of database: 14,423,052
effective search space: 2624995464
effective search space used: 2624995464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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