Guide to the Human Genome
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Name: LOC651986 Sequence: fasta or formatted (387aa) NCBI GI: 113419423
Description:

PREDICTED: similar to forkhead box L2

Not currently referenced in the text

Other entries for this name:
alt prot {632aa} PREDICTED: similar to forkhead box L2
alt prot {528aa} PREDICTED: similar to forkhead box L2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         33           2
 C cysteine            1.3          5           1
 D aspartate           4.9         19           2
 E glutamate           5.2         20           1
 F phenylalanine       3.6         14           1
 G glycine            10.3         40           3
 H histidine           2.1          8           1
 I isoleucine          2.3          9           1
 K lysine              3.6         14           1
 L leucine             8.0         31           2
 M methionine          1.8          7           1
 N asparagine          2.6         10           1
 P proline            12.4         48           2
 Q glutamine           3.6         14           2
 R arginine           12.4         48           7
 S serine              8.0         31           2
 T threonine           2.3          9           2
 V valine              2.6         10           2
 W tryptophan          1.0          4           1
 Y tyrosine            3.4         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to forkhead box L2 
LOC651986             0.754   PREDICTED: similar to forkhead box L2 
LOC651986             0.574   PREDICTED: similar to forkhead box L2 
LOC100288524          0.499   PREDICTED: hypothetical protein XP_002342748 
FOXL1                 0.163   forkhead box L1 
FOXL2                 0.151   forkhead box L2 
FOXS1                 0.149   forkhead box S1 
FOXC1                 0.145   forkhead box C1 
FOXI2                 0.142   forkhead box I2 
FOXD4L3               0.142   forkhead box D4-like 3 
FOXD4L6               0.141   forkhead box D4-like 6 
FOXD4L2               0.140   forkhead box D4-like 2 
FOXD4L4               0.140   forkhead box D4-like 4 
FOXD4L5               0.140   forkhead box D4-like 5 
FOXI1                 0.139   forkhead box I1 isoform a 
FOXI3                 0.139   forkhead box I3 
FOXD2                 0.139   forkhead box D2 
FOXA2                 0.137   forkhead box A2 isoform 2 
FOXC2                 0.137   forkhead box C2 
FOXA2                 0.137   forkhead box A2 isoform 1 
FOXD4L1               0.136   forkhead box D4-like 1 
FOXD4                 0.136   forkhead box D4 
FOXD1                 0.136   forkhead box D1 
FOXE3                 0.135   forkhead box E3 
FOXD3                 0.132   forkhead box D3 
FOXE1                 0.132   forkhead box E1 
FOXA1                 0.130   forkhead box A1 
FOXQ1                 0.123   forkhead box Q1 
FOXA3                 0.121   forkhead box A3 
FOXB2                 0.121   forkhead box B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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