Guide to the Human Genome
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Name: LOC651986 Sequence: fasta or formatted (528aa) NCBI GI: 169172132
Description:

PREDICTED: similar to forkhead box L2

Not currently referenced in the text

Other entries for this name:
alt prot {387aa} PREDICTED: similar to forkhead box L2
alt prot {632aa} PREDICTED: similar to forkhead box L2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         58           2
 C cysteine            1.1          6           1
 D aspartate           4.2         22           2
 E glutamate           4.5         24           1
 F phenylalanine       3.0         16           1
 G glycine            11.9         63           3
 H histidine           2.8         15           2
 I isoleucine          2.7         14           1
 K lysine              2.5         13           1
 L leucine             5.5         29           2
 M methionine          1.5          8           1
 N asparagine          2.1         11           1
 P proline            12.3         65           3
 Q glutamine           3.6         19           2
 R arginine           13.8         73           7
 S serine              7.0         37           3
 T threonine           2.7         14           2
 V valine              3.2         17           2
 W tryptophan          1.7          9           1
 Y tyrosine            2.8         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to forkhead box L2 
LOC651986             0.545   PREDICTED: similar to forkhead box L2 
LOC100288524          0.543   PREDICTED: hypothetical protein XP_002342748 
LOC651986             0.415   PREDICTED: similar to forkhead box L2 
FOXL1                 0.118   forkhead box L1 
FOXL2                 0.109   forkhead box L2 
FOXS1                 0.108   forkhead box S1 
FOXC1                 0.105   forkhead box C1 
FOXI3                 0.105   forkhead box I3 
FOXI2                 0.103   forkhead box I2 
FOXD4L3               0.103   forkhead box D4-like 3 
FOXD4L6               0.102   forkhead box D4-like 6 
FOXD2                 0.101   forkhead box D2 
FOXD4L2               0.101   forkhead box D4-like 2 
FOXD4L4               0.101   forkhead box D4-like 4 
FOXD4L5               0.101   forkhead box D4-like 5 
FOXI1                 0.100   forkhead box I1 isoform a 
FOXA2                 0.099   forkhead box A2 isoform 2 
FOXC2                 0.099   forkhead box C2 
FOXA2                 0.099   forkhead box A2 isoform 1 
FOXD4L1               0.098   forkhead box D4-like 1 
FOXE3                 0.098   forkhead box E3 
FOXD4                 0.098   forkhead box D4 
FOXD1                 0.098   forkhead box D1 
FOXD3                 0.096   forkhead box D3 
FOXE1                 0.096   forkhead box E1 
FOXA1                 0.094   forkhead box A1 
FOXG1                 0.090   forkhead box G1 
FOXQ1                 0.089   forkhead box Q1 
FOXA3                 0.087   forkhead box A3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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