Guide to the Human Genome
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Name: FOXD4L3 Sequence: fasta or formatted (417aa) NCBI GI: 157042770
Description:

forkhead box D4-like 3

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         46           3
 C cysteine            3.8         16           2
 D aspartate           3.6         15           1
 E glutamate           4.8         20           3
 F phenylalanine       3.1         13           1
 G glycine             7.4         31           4
 H histidine           3.4         14           1
 I isoleucine          2.9         12           1
 K lysine              3.1         13           2
 L leucine             9.8         41           3
 M methionine          0.7          3           1
 N asparagine          2.4         10           1
 P proline            13.4         56           4
 Q glutamine           3.6         15           2
 R arginine           11.0         46           3
 S serine              7.0         29           3
 T threonine           2.9         12           1
 V valine              2.6         11           1
 W tryptophan          1.2          5           1
 Y tyrosine            2.2          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box D4-like 3 
FOXD4L6               0.997   forkhead box D4-like 6 
FOXD4L5               0.965   forkhead box D4-like 5 
FOXD4L2               0.965   forkhead box D4-like 2 
FOXD4L4               0.965   forkhead box D4-like 4 
FOXD4                 0.800   forkhead box D4 
FOXD4L1               0.657   forkhead box D4-like 1 
FOXD1                 0.233   forkhead box D1 
FOXD2                 0.230   forkhead box D2 
FOXD3                 0.210   forkhead box D3 
FOXE3                 0.181   forkhead box E3 
FOXE1                 0.174   forkhead box E1 
FOXC1                 0.157   forkhead box C1 
FOXL1                 0.156   forkhead box L1 
FOXC2                 0.153   forkhead box C2 
FOXS1                 0.149   forkhead box S1 
FOXF1                 0.147   forkhead box F1 
FOXB2                 0.147   forkhead box B2 
FOXB1                 0.145   forkhead box B1 
FOXF2                 0.141   forkhead box F2 
FOXA1                 0.139   forkhead box A1 
FOXL2                 0.136   forkhead box L2 
FOXI3                 0.136   forkhead box I3 
FOXA3                 0.135   forkhead box A3 
FOXA2                 0.133   forkhead box A2 isoform 2 
FOXA2                 0.133   forkhead box A2 isoform 1 
LOC651986             0.133   PREDICTED: similar to forkhead box L2 
LOC651986             0.131   PREDICTED: similar to forkhead box L2 
LOC651986             0.131   PREDICTED: similar to forkhead box L2 
FOXI2                 0.131   forkhead box I2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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