Guide to the Human Genome
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Name: RBMX Sequence: fasta or formatted (391aa) NCBI GI: 56699409
Description:

RNA binding motif protein, X-linked

Referenced in:

hnRNP
RNA-binding Proteins
Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         15           2
 C cysteine            0.0          0           0
 D aspartate           8.7         34           2
 E glutamate           3.3         13           1
 F phenylalanine       1.8          7           1
 G glycine            15.6         61           3
 H histidine           0.8          3           1
 I isoleucine          0.8          3           1
 K lysine              3.3         13           1
 L leucine             3.1         12           2
 M methionine          2.0          8           1
 N asparagine          1.8          7           1
 P proline            11.5         45           5
 Q glutamine           0.5          2           1
 R arginine           14.6         57           2
 S serine             16.1         63           4
 T threonine           2.6         10           1
 V valine              2.8         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            6.9         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA binding motif protein, X-linked 
RBMXL1                0.937   RNA binding motif protein, X-linked-like 1 
RBMXL1                0.937   RNA binding motif protein, X-linked-like 1 
RBMXL2                0.683   testes-specific heterogenous nuclear ribonucleoprot...
RBMY1F                0.410   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1J                0.410   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1E                0.409   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1B                0.409   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1D                0.409   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1A1               0.409   RNA binding motif protein, Y-linked, family 1, member...
RBMXL3                0.353   RNA binding motif protein, X-linked-like 3 
LOC100288788          0.276   PREDICTED: similar to RNA binding motif protein, X-...
LOC100288788          0.276   PREDICTED: hypothetical protein XP_002343863 
LOC100291994          0.207   PREDICTED: hypothetical protein XP_002346350 
CIRBP                 0.122   cold inducible RNA binding protein 
RBM3                  0.098   RNA binding motif protein 3 
TAF15                 0.092   TBP-associated factor 15 isoform 2 
TAF15                 0.092   TBP-associated factor 15 isoform 1 
HNRNPR                0.078   heterogeneous nuclear ribonucleoprotein R isoform 3...
HNRNPR                0.078   heterogeneous nuclear ribonucleoprotein R isoform 1...
HNRNPR                0.078   heterogeneous nuclear ribonucleoprotein R isoform 4...
HNRNPR                0.078   heterogeneous nuclear ribonucleoprotein R isoform 2 [...
DAZAP1                0.076   DAZ associated protein 1 isoform b 
SFRS2                 0.073   splicing factor, arginine/serine-rich 2 
SFRS2B                0.073   splicing factor, arginine/serine-rich 2B 
DAZAP1                0.069   DAZ associated protein 1 isoform a 
HNRNPA3               0.066   heterogeneous nuclear ribonucleoprotein A3 
TRA2A                 0.066   transformer-2 alpha 
TRA2B                 0.063   splicing factor, arginine/serine-rich 10 
HNRNPA1               0.062   heterogeneous nuclear ribonucleoprotein A1 isoform b...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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