RBM39 30575

Name: RBM39	Sequence: fasta or formatted (524aa)		NCBI GI: 4757926
Description: RNA binding motif protein 39 isoform b		Referenced in: RNA-binding Proteins Capping and Splicing
Other entries for this name: alt prot [530aa] RNA binding motif protein 39 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 48 4 C cysteine 1.0 5 1 D aspartate 5.0 26 2 E glutamate 6.7 35 3 F phenylalanine 3.6 19 2 G glycine 6.5 34 2 H histidine 1.7 9 1 I isoleucine 5.0 26 2 K lysine 6.9 36 2 L leucine 7.1 37 2 M methionine 2.9 15 2 N asparagine 3.2 17 2 P proline 4.4 23 2 Q glutamine 4.0 21 2 R arginine 11.1 58 3 S serine 10.5 55 2 T threonine 4.2 22 2 V valine 5.0 26 1 W tryptophan 0.4 2 1 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA binding motif protein 39 isoform b RBM39 0.993 RNA binding motif protein 39 isoform a RBM23 0.449 RNA binding motif protein 23 isoform 1 RBM23 0.436 RNA binding motif protein 23 isoform 2 RBM23 0.412 RNA binding motif protein 23 isoform 3 PUF60 0.077 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.077 poly-U binding splicing factor 60KDa isoform a [Homo... LEMD3 0.077 LEM domain containing 3 PUF60 0.075 poly-U binding splicing factor 60KDa isoform b [Homo... U2AF2 0.067 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofor... U2AF2 0.066 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofo... PABPC4L 0.062 poly(A) binding protein, cytoplasmic 4-like HNRNPAB 0.058 heterogeneous nuclear ribonucleoprotein A/B isoform ... HNRNPAB 0.058 heterogeneous nuclear ribonucleoprotein A/B isoform ... RSRC2 0.058 arginine/serine-rich coiled-coil 2 isoform b RSRC2 0.058 arginine/serine-rich coiled-coil 2 isoform a HNRPDL 0.058 heterogeneous nuclear ribonucleoprotein D-like [Homo... PABPC4 0.056 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.056 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.056 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... MSI2 0.055 musashi 2 isoform a TIA1 0.055 TIA1 protein isoform 2 TIA1 0.054 TIA1 protein isoform 1 SF3B4 0.054 splicing factor 3b, subunit 4 MSI2 0.054 musashi 2 isoform b TRA2B 0.054 splicing factor, arginine/serine-rich 10 TIAL1 0.053 TIA-1 related protein isoform 1 HNRNPA2B1 0.052 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... PABPC3 0.051 poly(A) binding protein, cytoplasmic 3 CROP 0.051 cisplatin resistance-associated overexpressed protei... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.