CIRBP 28444

Name: CIRBP	Sequence: fasta or formatted (172aa)		NCBI GI: 4502847
Description: cold inducible RNA binding protein		Referenced in: RNA-binding Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 7 1 C cysteine 0.0 0 0 D aspartate 8.1 14 2 E glutamate 4.7 8 1 F phenylalanine 5.8 10 2 G glycine 19.8 34 3 H histidine 0.6 1 1 I isoleucine 1.7 3 1 K lysine 3.5 6 1 L leucine 1.7 3 1 M methionine 2.3 4 2 N asparagine 3.5 6 1 P proline 0.0 0 0 Q glutamine 4.1 7 1 R arginine 12.2 21 1 S serine 14.5 25 2 T threonine 2.3 4 1 V valine 5.2 9 4 W tryptophan 0.0 0 0 Y tyrosine 5.8 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cold inducible RNA binding protein RBM3 0.512 RNA binding motif protein 3 RBMXL1 0.304 RNA binding motif protein, X-linked-like 1 RBMXL1 0.304 RNA binding motif protein, X-linked-like 1 RBMX 0.298 RNA binding motif protein, X-linked RBMXL2 0.267 testes-specific heterogenous nuclear ribonucleoprot... LOC100288788 0.255 PREDICTED: similar to RNA binding motif protein, X-... LOC100288788 0.255 PREDICTED: hypothetical protein XP_002343863 TRA2B 0.252 splicing factor, arginine/serine-rich 10 RBMY1A1 0.239 RNA binding motif protein, Y-linked, family 1, member... RBMY1E 0.239 RNA binding motif protein, Y-linked, family 1, membe... RBMY1B 0.239 RNA binding motif protein, Y-linked, family 1, membe... RBMY1D 0.239 RNA binding motif protein, Y-linked, family 1, membe... RBMY1F 0.236 RNA binding motif protein, Y-linked, family 1, membe... RBMY1J 0.236 RNA binding motif protein, Y-linked, family 1, membe... TRA2A 0.233 transformer-2 alpha HNRNPA3 0.230 heterogeneous nuclear ribonucleoprotein A3 HNRNPA1 0.230 heterogeneous nuclear ribonucleoprotein A1 isoform b... HNRNPA1 0.230 heterogeneous nuclear ribonucleoprotein A1 isoform a ... HNRNPA0 0.221 heterogeneous nuclear ribonucleoprotein A0 HNRNPA2B1 0.221 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... HNRNPA2B1 0.221 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... HNRNPA1L2 0.218 heterogeneous nuclear ribonucleoprotein A1-like [Hom... HNRNPA1L2 0.218 heterogeneous nuclear ribonucleoprotein A1-like [Hom... NCL 0.202 nucleolin RBMXL3 0.196 RNA binding motif protein, X-linked-like 3 HNRPDL 0.190 heterogeneous nuclear ribonucleoprotein D-like [Homo... SFRS2 0.187 splicing factor, arginine/serine-rich 2 SFRS2B 0.175 splicing factor, arginine/serine-rich 2B LOC120364 0.163 PREDICTED: similar to heterogeneous nuclear ribonuc... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.