TIA1 10174

Name: TIA1	Sequence: fasta or formatted (375aa)		NCBI GI: 188219593
Description: TIA1 protein isoform 1		Referenced in: Polyadenylation Additional Serine / Threonine Protein Kinases
Other entries for this name: alt prot [386aa] TIA1 protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 26 4 C cysteine 1.6 6 1 D aspartate 3.5 13 1 E glutamate 4.5 17 1 F phenylalanine 4.3 16 2 G glycine 9.9 37 2 H histidine 2.1 8 1 I isoleucine 4.3 16 1 K lysine 5.1 19 2 L leucine 3.5 13 1 M methionine 4.0 15 1 N asparagine 6.1 23 1 P proline 6.1 23 2 Q glutamine 8.8 33 3 R arginine 3.2 12 1 S serine 6.7 25 2 T threonine 5.9 22 2 V valine 6.4 24 2 W tryptophan 2.7 10 1 Y tyrosine 4.5 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TIA1 protein isoform 1 TIA1 0.987 TIA1 protein isoform 2 TIAL1 0.759 TIA-1 related protein isoform 1 TIAL1 0.746 TIA-1 related protein isoform 2 PABPC3 0.120 poly(A) binding protein, cytoplasmic 3 PABPC1 0.118 poly(A) binding protein, cytoplasmic 1 PABPC4L 0.116 poly(A) binding protein, cytoplasmic 4-like PABPC4 0.116 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.116 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.116 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC1L 0.103 poly(A)-binding protein, cytoplasmic 1-like PABPC5 0.103 poly(A) binding protein, cytoplasmic 5 ELAVL4 0.102 ELAV-like 4 isoform 5 ELAVL4 0.102 ELAV-like 4 isoform 4 ELAVL4 0.102 ELAV-like 4 isoform 3 ELAVL4 0.102 ELAV-like 4 isoform 2 ELAVL4 0.099 ELAV-like 4 isoform 1 ELAVL2 0.099 ELAV (embryonic lethal, abnormal vision, Drosophila... SF3B4 0.098 splicing factor 3b, subunit 4 ELAVL3 0.098 ELAV-like protein 3 isoform 2 ELAVL3 0.095 ELAV-like protein 3 isoform 1 ELAVL1 0.094 ELAV-like 1 PUF60 0.078 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.078 poly-U binding splicing factor 60KDa isoform b [Homo... PUF60 0.078 poly-U binding splicing factor 60KDa isoform a [Homo... PABPC1L2B 0.073 poly(A) binding protein, cytoplasmic 1-like 2B [Hom... PABPC1L2A 0.073 poly(A) binding protein, cytoplasmic 1-like 2A [Homo... RBM39 0.070 RNA binding motif protein 39 isoform b RBM39 0.070 RNA binding motif protein 39 isoform a RBM23 0.068 RNA binding motif protein 23 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.