Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 212274327
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|212274327 transmembrane protein 151B [Homo sapiens]
(566 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|212274327 transmembrane protein 151B [Homo sapiens] 1182 0.0
gi|23397566 transmembrane protein 151A [Homo sapiens] 480 e-135
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 42 0.001
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 42 0.001
gi|119220564 one cut domain, family member 2 [Homo sapiens] 41 0.003
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 41 0.003
gi|149588928 SLAIN motif family, member 2 [Homo sapiens] 41 0.003
gi|23510368 homeobox D11 [Homo sapiens] 40 0.004
gi|109255251 loricrin [Homo sapiens] 39 0.017
gi|7706435 headcase [Homo sapiens] 38 0.028
gi|7710121 engrailed homeobox 2 [Homo sapiens] 38 0.028
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 38 0.028
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 38 0.028
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 38 0.028
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 38 0.028
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 38 0.028
gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens] 37 0.037
gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens] 37 0.037
gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens] 37 0.037
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 37 0.048
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 37 0.048
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 37 0.063
gi|195972866 keratin 10 [Homo sapiens] 37 0.063
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 37 0.063
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 37 0.063
gi|145309320 forkhead box Q1 [Homo sapiens] 36 0.082
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 36 0.082
gi|239754438 PREDICTED: hypothetical protein [Homo sapiens] 36 0.11
gi|239748928 PREDICTED: hypothetical protein XP_002346859 [Homo ... 36 0.11
gi|239742950 PREDICTED: hypothetical protein XP_002342702 [Homo ... 36 0.11
>gi|212274327 transmembrane protein 151B [Homo sapiens]
Length = 566
Score = 1182 bits (3057), Expect = 0.0
Identities = 566/566 (100%), Positives = 566/566 (100%)
Query: 1 MSPPGSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEGPAREEQRPIQPSFTKSLCRE 60
MSPPGSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEGPAREEQRPIQPSFTKSLCRE
Sbjct: 1 MSPPGSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEGPAREEQRPIQPSFTKSLCRE 60
Query: 61 SHWKCLLLSLLMYGCLGAVAWCHVTTVTRLTFSSAYQGNSLMYHDSPCSNGYVYIPLAFL 120
SHWKCLLLSLLMYGCLGAVAWCHVTTVTRLTFSSAYQGNSLMYHDSPCSNGYVYIPLAFL
Sbjct: 61 SHWKCLLLSLLMYGCLGAVAWCHVTTVTRLTFSSAYQGNSLMYHDSPCSNGYVYIPLAFL 120
Query: 121 LMLYAVYLVECWHCQARHELQHRVDVSSVRERVGRMQQATPCIWWKAISYHYVRRTRQVT 180
LMLYAVYLVECWHCQARHELQHRVDVSSVRERVGRMQQATPCIWWKAISYHYVRRTRQVT
Sbjct: 121 LMLYAVYLVECWHCQARHELQHRVDVSSVRERVGRMQQATPCIWWKAISYHYVRRTRQVT 180
Query: 181 RYRNGDAYTTTQVYHERVNTHVAEAEFDYARCGVRDVSKTLVGLEGAPATRLRFTKCFSF 240
RYRNGDAYTTTQVYHERVNTHVAEAEFDYARCGVRDVSKTLVGLEGAPATRLRFTKCFSF
Sbjct: 181 RYRNGDAYTTTQVYHERVNTHVAEAEFDYARCGVRDVSKTLVGLEGAPATRLRFTKCFSF 240
Query: 241 ASVEAENAYLCQRARFFAENEGLDDYMEAREGMHLKNVDFREFMVAFPDPARPPWYACSS 300
ASVEAENAYLCQRARFFAENEGLDDYMEAREGMHLKNVDFREFMVAFPDPARPPWYACSS
Sbjct: 241 ASVEAENAYLCQRARFFAENEGLDDYMEAREGMHLKNVDFREFMVAFPDPARPPWYACSS 300
Query: 301 AFWAAALLTLSWPLRVLAEYRTAYAHYHVEKLFGLEGPGSASSAGGGLSPSDELLPPLTH 360
AFWAAALLTLSWPLRVLAEYRTAYAHYHVEKLFGLEGPGSASSAGGGLSPSDELLPPLTH
Sbjct: 301 AFWAAALLTLSWPLRVLAEYRTAYAHYHVEKLFGLEGPGSASSAGGGLSPSDELLPPLTH 360
Query: 361 RLPRVNTVDSTELEWHIRSNQQLVPSYSEAVLMDLAGLGTRCGGAGGGYAPSCRYGGVGG 420
RLPRVNTVDSTELEWHIRSNQQLVPSYSEAVLMDLAGLGTRCGGAGGGYAPSCRYGGVGG
Sbjct: 361 RLPRVNTVDSTELEWHIRSNQQLVPSYSEAVLMDLAGLGTRCGGAGGGYAPSCRYGGVGG 420
Query: 421 PGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICASPRAGPGPGGGAGCGGSRFSLGRLY 480
PGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICASPRAGPGPGGGAGCGGSRFSLGRLY
Sbjct: 421 PGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICASPRAGPGPGGGAGCGGSRFSLGRLY 480
Query: 481 GSRRSCLWRSRSGSVNEASCPTEQTRLSSQASMGDDEDDDEEEAGPPPPYHDALYFPVLI 540
GSRRSCLWRSRSGSVNEASCPTEQTRLSSQASMGDDEDDDEEEAGPPPPYHDALYFPVLI
Sbjct: 481 GSRRSCLWRSRSGSVNEASCPTEQTRLSSQASMGDDEDDDEEEAGPPPPYHDALYFPVLI 540
Query: 541 VHRQEGCLGHSHRPLHRHGSCVETSL 566
VHRQEGCLGHSHRPLHRHGSCVETSL
Sbjct: 541 VHRQEGCLGHSHRPLHRHGSCVETSL 566
>gi|23397566 transmembrane protein 151A [Homo sapiens]
Length = 468
Score = 480 bits (1235), Expect = e-135
Identities = 277/553 (50%), Positives = 320/553 (57%), Gaps = 112/553 (20%)
Query: 14 GGGGGGGGPGVSEELTAAAAAAAADEGPAREEQRPIQPSFTKSLCRESHWKCLLLSLLMY 73
G G GG P A D P REEQRP++ S SLCRESHWKCLLL+LL++
Sbjct: 5 GAGDGGEVP-----------ALIPDGEPLREEQRPLKQSLGSSLCRESHWKCLLLTLLIH 53
Query: 74 GCLGAVAWCHVTTVTRLTF------SSAYQGNSLMYHDSPCSNGYVYIPLAFLLMLYAVY 127
C VAWC + TV RL + G Y SPCS+GY+YIPLAF+ +LY +Y
Sbjct: 54 ACGAVVAWCRLATVPRLVLGPEAALARGAGGPPPTYPASPCSDGYLYIPLAFVSLLYLLY 113
Query: 128 LVECWHCQARHELQHRVDVSSVRERVGRMQQATPCIWWKAISYHYVRRTRQVTRYRNGDA 187
L ECWHC R R D +V + R+QQA PC+WWKA SYHYVRRTRQ+TRYRNGDA
Sbjct: 114 LAECWHCHVRSCQAPRTDAHTVLALIRRLQQAPPCVWWKATSYHYVRRTRQITRYRNGDA 173
Query: 188 YTTTQVYHERVNTHVAEAEFDYARCGVRDVSKTLVGLEGAPATRLRFTKCFSFASVEAEN 247
YTTTQVYHER ++ A EFDY+ GVRDVSK LVGL ATRLRFTKCFSF S EAE
Sbjct: 174 YTTTQVYHERADSRTARGEFDYSAHGVRDVSKELVGLAEHAATRLRFTKCFSFGSAEAEA 233
Query: 248 AYLCQRARFFAENEGLDDYMEAREGMHLKNVDFREFMVAFPDPARPPWYACSSAFWAAAL 307
+YL QRARFF+ NEGLDDY+EAREGMHLK+VDFRE ++ F DP PPWYA + FW +
Sbjct: 234 SYLTQRARFFSANEGLDDYLEAREGMHLKDVDFRESLMVFADPRSPPWYARAWVFWLVSA 293
Query: 308 LTLSWPLRVLAEYRTAYAHYHVEKLFGLEGPGSASSAGGGLSPSDELLPPLTHRLPRVNT 367
TLSWPLRV+A Y TA+ HY VEKLFG ASS G PS PPL+ RV T
Sbjct: 294 ATLSWPLRVVAAYGTAHVHYQVEKLFG------ASSPPPGAVPSG---PPLS----RVAT 340
Query: 368 VDSTELEWHIRSNQQLVPSYSEAVLMDLAGLGTRCGGAGGGYAPSCRYGGVGGPGAAGVA 427
VD TELEWHI SN+QLVPSYSEAV+M GAG G
Sbjct: 341 VDFTELEWHICSNRQLVPSYSEAVVM----------GAGSG------------------- 371
Query: 428 PYRRSCEHCQRAVSSSSI-----------FSRSALSICASPRAGPGPGGGAGCGGSRFSL 476
Y R C+ C+R+VSS+S+ FSRS LS+ A RA PG
Sbjct: 372 AYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPG-------------- 417
Query: 477 GRLYGSRRSCLWRSRSGSVNEASCPTEQTRLSSQASMGDDEDDDEEEAGPPPPYHDALYF 536
++RS SG +G +D E PP Y DALYF
Sbjct: 418 ----------VFRSLSGG-----------------PLGR-RGEDTEPLESPPCYEDALYF 449
Query: 537 PVLIVHRQEGCLG 549
PVLIVH GC G
Sbjct: 450 PVLIVHGDSGCQG 462
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 42.4 bits (98), Expect = 0.001
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 23/231 (9%)
Query: 285 VAFPDPARPPWYACSSAFWAAALLTLSWPLRVLAEYRTAYAHYHVEKLFGLEGPGSASSA 344
+++P PA P +Y AAA +L +P ++ H G+ +A++A
Sbjct: 250 MSWPHPADPSFYTYMMTH-AAATGSLPYPFH-------SHVPLHYYPHVGVTAAAAAAAA 301
Query: 345 GGGLSPSDELLPPLTHRLPRVNTVDSTELEWHIRSNQQLVPSY-------SEAVLMDLAG 397
G + + P T P +D+ H S +L+ S+ + A L
Sbjct: 302 SGAAAAASS--PFATSIRP----LDTFRALSHPYSRPELLCSFRHPGLYQAPAAAAGLNS 355
Query: 398 LGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICASP 457
+ A A + G P + G AP SC C + S+++ + +A ++ +
Sbjct: 356 AASAAAAAAAAAAAASSAAAAGAPPSGGSAPC--SCLSCHSSQSAAAAAAAAAAALGSRG 413
Query: 458 RAGPGPGGGAGCGGSRFSLGRLYGSRRSCLWRSRSGSVNEASCPTEQTRLS 508
G G GGG G GG + G + RS SG + ++ +T +S
Sbjct: 414 GGGGGGGGGGGGGGGAGAGGGSDFGCSAAAPRSESGFLPYSAAVLSKTAVS 464
Score = 33.1 bits (74), Expect = 0.70
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEG 40
G G GGGGGG G G + +AAA ++ G
Sbjct: 414 GGGGGGGGGGGGGGGAGAGGGSDFGCSAAAPRSESG 449
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 42.4 bits (98), Expect = 0.001
Identities = 33/111 (29%), Positives = 42/111 (37%), Gaps = 21/111 (18%)
Query: 397 GLGTRCGGAG---GGYAPSCR--YGGVGGPGAAGVAPY-----------RRSCEHCQRAV 440
G G+ CGG G GG C G GG G++ P SC C +
Sbjct: 9 GCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGG 68
Query: 441 SSSSIFSRSALSICASPRAGPGPGGGA-----GCGGSRFSLGRLYGSRRSC 486
SS S+ C + G G GG+ CGGS+ G GS+ C
Sbjct: 69 CGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 119
Score = 35.4 bits (80), Expect = 0.14
Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 15/93 (16%)
Query: 402 CGGAGGGYAPSCRYGGVGGPGAAGVAPYRR--------SCEHCQRAVSSSSIFSRSALSI 453
CGG+ GG C GG G V + SC C + S S+ A
Sbjct: 112 CGGSKGGCGSGC--GGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGS 169
Query: 454 CASPRAGPGPGGGAGCGGSRFSLGRLYGSRRSC 486
C G GG CGG + G GS+ C
Sbjct: 170 C-----GGSKGGCGSCGGCKGGCGSCGGSKGGC 197
>gi|119220564 one cut domain, family member 2 [Homo sapiens]
Length = 504
Score = 41.2 bits (95), Expect = 0.003
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEGPAREEQRPIQP 51
G + G GGGGGGGGPG +EL A+ + A G A + P P
Sbjct: 38 GGSGGGGGGGGGGGGGGPGHEQELLASPSPHHAGRGAAGSLRGPPPP 84
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 41.2 bits (95), Expect = 0.003
Identities = 34/102 (33%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Query: 397 GLGTRCGGAG---GGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFS----RS 449
G G+ CGG G GGY C GG G V + C C A S SS S +
Sbjct: 16 GCGSGCGGCGSGCGGYGSGC--GGCGSSCCVPVCCCKPVC-CCVPACSCSSCGSCGGSKG 72
Query: 450 ALSICASPRAGPGPGGGA-----GCGGSRFSLGRLYGSRRSC 486
C + G G GG+ CGGS+ G GS+ C
Sbjct: 73 DCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 114
Score = 38.5 bits (88), Expect = 0.017
Identities = 34/101 (33%), Positives = 39/101 (38%), Gaps = 16/101 (15%)
Query: 397 GLGTRCGGAG----------GGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIF 446
G G+ CGG G GGY C GG G V + C C A S SS
Sbjct: 9 GCGSGCGGCGSGCGGCGSGCGGYGSGC--GGCGSSCCVPVCCCKPVC-CCVPACSCSSCG 65
Query: 447 S-RSALSICASPRAGPGPGGGAGCGGSRFSLGRLYGSRRSC 486
S + C S G GG CGGS+ G GS+ C
Sbjct: 66 SCGGSKGDCGS--CGGSKGGCGSCGGSKGGCGSCGGSKGGC 104
Score = 32.3 bits (72), Expect = 1.2
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 22/110 (20%)
Query: 402 CGGAGG--GYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICASPRA 459
CG GG G SC G GG G+ G + + C C S+ C +
Sbjct: 64 CGSCGGSKGDCGSCG-GSKGGCGSCGGS--KGGCGSCGG--------SKGGCGSCGGSKG 112
Query: 460 GPGPGGGA-----GCGGSRFSLGRLYGSR----RSCLWRSRSGSVNEASC 500
G G GG+ CGGS+ G S+ + C S GS ++SC
Sbjct: 113 GCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGSCCQSSC 162
>gi|149588928 SLAIN motif family, member 2 [Homo sapiens]
Length = 581
Score = 40.8 bits (94), Expect = 0.003
Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 2 SPPGSAAGESAAGGGGGGGGPG--VSEELTAAAAAAAADEGPAREEQRPIQPSFTKSLCR 59
SP G G SA GGG G GP SEEL A + AA EG +E P++P L R
Sbjct: 63 SPRGFPLGLSAKSGGGPGSGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPD---ELER 119
Query: 60 ESHWK 64
S W+
Sbjct: 120 LSGWE 124
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 40.4 bits (93), Expect = 0.004
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 5 GSAAGESAAGGGGGGGG------PGVSEELTAAAAAAAADEGPAREEQRP 48
GSA G S+ GG GGGGG P + AAAAAAAA+E + E P
Sbjct: 82 GSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLP 131
Score = 32.7 bits (73), Expect = 0.91
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 20/85 (23%)
Query: 403 GGAGGGYAPSCRYG---GVGGPGAAGVAPYRRSCEHCQRAVSSS---------------- 443
GG GGG A G G GG GA G APY + A +++
Sbjct: 77 GGGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPAGRR 136
Query: 444 -SIFSRSALSICASPRAGPGPGGGA 467
+ ++ +CA+P GP G A
Sbjct: 137 PDVLFKAPEPVCAAPGPPHGPAGAA 161
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 38.5 bits (88), Expect = 0.017
Identities = 30/82 (36%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICAS 456
G G GG GGG S +Y G GG G + S SS S S C S
Sbjct: 72 GGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCF-SSGGGGSGCFSSGGGGSSGGGSGCFS 130
Query: 457 PRAGPGPGGGAGC---GGSRFS 475
G GGG+GC GG FS
Sbjct: 131 SGGGGSSGGGSGCFSSGGGGFS 152
Score = 36.2 bits (82), Expect = 0.082
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 396 AGLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICA 455
+G G+ C +GGG C Y G GG G G + + VSS + + S
Sbjct: 170 SGGGSGCFSSGGGGGSVCGYSG-GGSGCGGGSSGGSGSGY----VSSQQV---TQTSCAP 221
Query: 456 SPRAGPGPGGGAGCGGSR-FSLGRLYGS 482
P G G GG G GGS FS G GS
Sbjct: 222 QPSYGGGSSGGGGSGGSGCFSSGGGGGS 249
Score = 35.8 bits (81), Expect = 0.11
Identities = 25/76 (32%), Positives = 29/76 (38%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICAS 456
G G GG GGG + GG+GG G + S S S S C S
Sbjct: 56 GGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFS 115
Query: 457 PRAGPGPGGGAGCGGS 472
G GGG+GC S
Sbjct: 116 SGGGGSSGGGSGCFSS 131
Score = 35.4 bits (80), Expect = 0.14
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICAS 456
G G+ CG +GGG C G GG G+ V+ + + C S S S +
Sbjct: 182 GGGSVCGYSGGG--SGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSG 239
Query: 457 PRAGPGPGGGAGCGGSRFSLG 477
+ G GG +GCGG +G
Sbjct: 240 CFSSGGGGGSSGCGGGSSGIG 260
Score = 34.7 bits (78), Expect = 0.24
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Query: 396 AGLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICA 455
+G G+ C +GGG + GG G ++G + CQ SS S S C
Sbjct: 122 SGGGSGCFSSGGGGSS----GGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCF 177
Query: 456 SPRAGPG-----PGGGAGCGG 471
S G G GGG+GCGG
Sbjct: 178 SSGGGGGSVCGYSGGGSGCGG 198
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 37.7 bits (86), Expect = 0.028
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 15/74 (20%)
Query: 6 SAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEGPAREEQ-----------RPI---QP 51
+AAG AGG G GG G AAAAA AA G A+ E RP+ +
Sbjct: 53 AAAGAPGAGGAAGAGGAGTGAA-NAAAAAGAAAAGDAKNEAPCATPLICSFGRPVDLEKD 111
Query: 52 SFTKSLCRESHWKC 65
+ K +C H C
Sbjct: 112 DYQKVVCNNEHCPC 125
>gi|7710121 engrailed homeobox 2 [Homo sapiens]
Length = 333
Score = 37.7 bits (86), Expect = 0.028
Identities = 39/136 (28%), Positives = 47/136 (34%), Gaps = 13/136 (9%)
Query: 338 PGSASSAGGGLSPSD-ELLPPLTHRLPRVNTVDSTELEWHIRSNQQLVPSYSEAVLMDLA 396
PG S GGG SP + + LP V H R + +
Sbjct: 25 PGGGSGGGGGSSPGEADTGRRRALMLPAVLQAPGNHQHPH-RITNFFIDNILRPEFGRRK 83
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICAS 456
GT C GAGGG R GG GG G A A ++ + S S R +
Sbjct: 84 DAGTCCAGAGGG-----RGGGAGGEGGASGAEGGGGAGGSEQLLGSGSREPRQ------N 132
Query: 457 PRAGPGPGGGAGCGGS 472
P PG GG GS
Sbjct: 133 PPCAPGAGGPLPAAGS 148
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEGP 41
G A GE A G GGGG G SE+L + + P
Sbjct: 98 GGAGGEGGASGAEGGGGAGGSEQLLGSGSREPRQNPP 134
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 37.7 bits (86), Expect = 0.028
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 1 MSPPGSAAGESAAGGGGGGGGPGVSEELTAAA 32
+ PPG G SA GGGGGGG GV L +A
Sbjct: 77 LPPPGGGGGGSAGSGGGGGGGVGVPGLLVGSA 108
Score = 30.0 bits (66), Expect = 5.9
Identities = 34/103 (33%), Positives = 37/103 (35%), Gaps = 20/103 (19%)
Query: 399 GTRCGGAGGGYAPSCRYG--GVGGP--------GAAGVAPYRRSCEHCQRAVSSSSIFS- 447
G+ GG GG P G GVGG GAA Y S A SS S
Sbjct: 89 GSGGGGGGGVGVPGLLVGSAGVGGDPSLSSLPAGAALCLKYGESASRGSVAESSGGEQSP 148
Query: 448 ------RSALSI---CASPRAGPGPGGGAGCGGSRFSLGRLYG 481
R L + A PRA PG GGG S L+G
Sbjct: 149 DDDSDGRCELVLRAGVADPRASPGAGGGGAKAAEGCSNAHLHG 191
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 37.7 bits (86), Expect = 0.028
Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 30/105 (28%)
Query: 402 CGGAGGGY---------------APSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIF 446
CGG G G A SC G GG G+ G + +R C C
Sbjct: 55 CGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGGS--KRGCVSCG--------V 104
Query: 447 SRSALSICASPRAGPGPGGGA-----GCGGSRFSLGRLYGSRRSC 486
S+ A C + G G GG+ CGGS+ G GS+ C
Sbjct: 105 SKGACGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 149
Score = 36.6 bits (83), Expect = 0.063
Identities = 32/108 (29%), Positives = 38/108 (35%), Gaps = 23/108 (21%)
Query: 397 GLGTRCGGAGGGYAPSCRYG--GVGGPGAAGVAPY-----------RRSCEHCQRAVSSS 443
G G+ CGG GG C G G GG G+ P SC C + S
Sbjct: 37 GCGSGCGGCGG-----CGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGCGS 91
Query: 444 SIFSRSALSIC-----ASPRAGPGPGGGAGCGGSRFSLGRLYGSRRSC 486
S+ C A G GG CGGS+ G GS+ C
Sbjct: 92 CGGSKRGCVSCGVSKGACGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 139
Score = 32.0 bits (71), Expect = 1.6
Identities = 28/97 (28%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSIC-- 454
G G+ CGG G G G G G G C C S + +C
Sbjct: 16 GRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCCCKPMCCC 75
Query: 455 --ASPRAGPGPGGGAGCGGSR---FSLGRLYGSRRSC 486
A + G GG CGGS+ S G G+ SC
Sbjct: 76 VPACSCSSCGKGGCGSCGGSKRGCVSCGVSKGACGSC 112
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 37.7 bits (86), Expect = 0.028
Identities = 39/148 (26%), Positives = 56/148 (37%), Gaps = 18/148 (12%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSS------IFSRSA 450
G G GG GGG S GG GG GA G + A ++ S +
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
Query: 451 LSICASPRAG-----PGPGGGAGCGGSRFSLGRLYGSRRSCLWRSRSGSVNEASCPTEQT 505
+ +SPR GPGGG S+ + G G + +++ S + PT
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS---GATPTLNQ 363
Query: 506 RLSSQASM----GDDEDDDEEEAGPPPP 529
L+S + M G + + PPPP
Sbjct: 364 LLTSPSPMMRSYGGSYPEYSSPSAPPPP 391
Score = 36.6 bits (83), Expect = 0.063
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 5 GSAAGESAAGGGGGGGGPGV----SEELTAAAAAAAADEG 40
G G +GGGGGGGG G + + AAAAAAAA G
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
Score = 36.2 bits (82), Expect = 0.082
Identities = 18/36 (50%), Positives = 19/36 (52%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEG 40
G +G GGG G GG G AAAAAAAA G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Score = 33.5 bits (75), Expect = 0.53
Identities = 17/36 (47%), Positives = 17/36 (47%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEG 40
GS G G G GG G G AAAAAAA G
Sbjct: 261 GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 30.0 bits (66), Expect = 5.9
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 5 GSAAGESAAGGGGGG------GGPGVSEELTAAAAAAAADEG 40
G G S GGGGGG G V+ AAAAAA G
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 37.7 bits (86), Expect = 0.028
Identities = 39/148 (26%), Positives = 56/148 (37%), Gaps = 18/148 (12%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSS------IFSRSA 450
G G GG GGG S GG GG GA G + A ++ S +
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
Query: 451 LSICASPRAG-----PGPGGGAGCGGSRFSLGRLYGSRRSCLWRSRSGSVNEASCPTEQT 505
+ +SPR GPGGG S+ + G G + +++ S + PT
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS---GATPTLNQ 363
Query: 506 RLSSQASM----GDDEDDDEEEAGPPPP 529
L+S + M G + + PPPP
Sbjct: 364 LLTSPSPMMRSYGGSYPEYSSPSAPPPP 391
Score = 36.6 bits (83), Expect = 0.063
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 5 GSAAGESAAGGGGGGGGPGV----SEELTAAAAAAAADEG 40
G G +GGGGGGGG G + + AAAAAAAA G
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
Score = 36.2 bits (82), Expect = 0.082
Identities = 18/36 (50%), Positives = 19/36 (52%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEG 40
G +G GGG G GG G AAAAAAAA G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Score = 33.5 bits (75), Expect = 0.53
Identities = 17/36 (47%), Positives = 17/36 (47%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEG 40
GS G G G GG G G AAAAAAA G
Sbjct: 261 GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 30.0 bits (66), Expect = 5.9
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 5 GSAAGESAAGGGGGG------GGPGVSEELTAAAAAAAADEG 40
G G S GGGGGG G V+ AAAAAA G
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 37.7 bits (86), Expect = 0.028
Identities = 39/148 (26%), Positives = 56/148 (37%), Gaps = 18/148 (12%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSS------IFSRSA 450
G G GG GGG S GG GG GA G + A ++ S +
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
Query: 451 LSICASPRAG-----PGPGGGAGCGGSRFSLGRLYGSRRSCLWRSRSGSVNEASCPTEQT 505
+ +SPR GPGGG S+ + G G + +++ S + PT
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS---GATPTLNQ 363
Query: 506 RLSSQASM----GDDEDDDEEEAGPPPP 529
L+S + M G + + PPPP
Sbjct: 364 LLTSPSPMMRSYGGSYPEYSSPSAPPPP 391
Score = 36.6 bits (83), Expect = 0.063
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 5 GSAAGESAAGGGGGGGGPGV----SEELTAAAAAAAADEG 40
G G +GGGGGGGG G + + AAAAAAAA G
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
Score = 36.2 bits (82), Expect = 0.082
Identities = 18/36 (50%), Positives = 19/36 (52%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEG 40
G +G GGG G GG G AAAAAAAA G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Score = 33.5 bits (75), Expect = 0.53
Identities = 17/36 (47%), Positives = 17/36 (47%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEG 40
GS G G G GG G G AAAAAAA G
Sbjct: 261 GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 30.0 bits (66), Expect = 5.9
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 5 GSAAGESAAGGGGGG------GGPGVSEELTAAAAAAAADEG 40
G G S GGGGGG G V+ AAAAAA G
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
>gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens]
Length = 920
Score = 37.4 bits (85), Expect = 0.037
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 12/103 (11%)
Query: 403 GGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALS--ICASPR-- 458
GG GGG + + PGA G A R + A ++ + + LS + ASPR
Sbjct: 688 GGGGGGLHVAIPDSVLTPPGADGAAA--RKTQFGASATAALAPVASDPLSPPLSASPRDK 745
Query: 459 ------AGPGPGGGAGCGGSRFSLGRLYGSRRSCLWRSRSGSV 495
G G GGGAG GG S LY L R ++G+V
Sbjct: 746 HPGNGGGGGGGGGGAGGGGPSASNSLLYTGDLEALQRLQAGNV 788
Score = 33.5 bits (75), Expect = 0.53
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 4 PGSAAGESAAGGGGGGGGPGVSEEL 28
PG+ G GGG GGGGP S L
Sbjct: 747 PGNGGGGGGGGGGAGGGGPSASNSL 771
Score = 29.6 bits (65), Expect = 7.7
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 3 PPGSAAGESAAGGGGGGGGPG 23
PP S S GGGGGGGG G
Sbjct: 672 PPSSEHFPSPQGGGGGGGGGG 692
>gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens]
Length = 901
Score = 37.4 bits (85), Expect = 0.037
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 12/103 (11%)
Query: 403 GGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALS--ICASPR-- 458
GG GGG + + PGA G A R + A ++ + + LS + ASPR
Sbjct: 669 GGGGGGLHVAIPDSVLTPPGADGAAA--RKTQFGASATAALAPVASDPLSPPLSASPRDK 726
Query: 459 ------AGPGPGGGAGCGGSRFSLGRLYGSRRSCLWRSRSGSV 495
G G GGGAG GG S LY L R ++G+V
Sbjct: 727 HPGNGGGGGGGGGGAGGGGPSASNSLLYTGDLEALQRLQAGNV 769
Score = 33.5 bits (75), Expect = 0.53
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 4 PGSAAGESAAGGGGGGGGPGVSEEL 28
PG+ G GGG GGGGP S L
Sbjct: 728 PGNGGGGGGGGGGAGGGGPSASNSL 752
Score = 29.6 bits (65), Expect = 7.7
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 3 PPGSAAGESAAGGGGGGGGPG 23
PP S S GGGGGGGG G
Sbjct: 653 PPSSEHFPSPQGGGGGGGGGG 673
>gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens]
Length = 1458
Score = 37.4 bits (85), Expect = 0.037
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 448 RSALSICASPRAGPGPGGGAGCGGSRFSLGRLYGSRRSCLWRSRSGSVNEASCPTEQTRL 507
+S+L + S GPGPG GAG G GS R+RS ASCP +
Sbjct: 6 KSSLRLLGSKSPGPGPGPGAGA-----EPGATGGSSHFISSRTRSSKTRAASCPAAKAGG 60
Query: 508 SSQASMGDDE 517
S A + DE
Sbjct: 61 SGGAGVTLDE 70
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 37.0 bits (84), Expect = 0.048
Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 6/134 (4%)
Query: 396 AGLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIF-----SRSA 450
AG + GAG +GG G G AG A V + +F R
Sbjct: 143 AGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVDPAVVFPFPVNKREP 202
Query: 451 LSICASPRAGPGPGGGAGCG-GSRFSLGRLYGSRRSCLWRSRSGSVNEASCPTEQTRLSS 509
+ A+P + P G G G G + R SG ++A + + LS
Sbjct: 203 APVPAAPASAPAAGPAVASGAGIAAPAGAPGVAPPRPGGRQTSGGDHKALSTSGEDTLSD 262
Query: 510 QASMGDDEDDDEEE 523
D+E+D+EEE
Sbjct: 263 SDDEDDEEEDEEEE 276
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 37.0 bits (84), Expect = 0.048
Identities = 32/93 (34%), Positives = 36/93 (38%), Gaps = 17/93 (18%)
Query: 397 GLGTRCGGAG---GGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSI 453
G G+ CGG G GG C GG G V + C C A S SS
Sbjct: 9 GCGSGCGGCGSGCGGCGSGC--GGCGSSCCVPVCCCKPVC-CCVPACSCSS--------- 56
Query: 454 CASPRAGPGPGGGAGCGGSRFSLGRLYGSRRSC 486
C S G GG CGGS+ G GS+ C
Sbjct: 57 CGS--CGGSKGGCGSCGGSKGGCGSCGGSKGGC 87
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 36.6 bits (83), Expect = 0.063
Identities = 20/45 (44%), Positives = 23/45 (51%)
Query: 3 PPGSAAGESAAGGGGGGGGPGVSEELTAAAAAAAADEGPAREEQR 47
P A G+ GGGGGGG S +AAAAAAA A +R
Sbjct: 59 PQNQAHGKGGHRGGGGGGGKSSSSSSASAAAAAAAASSSASCSRR 103
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 36.6 bits (83), Expect = 0.063
Identities = 35/106 (33%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 396 AGLGTRCGGAGGGYAPSCR--YGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSI 453
+G G+ GG GGG+ S YGG G + Y SSS + +
Sbjct: 478 SGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGS--- 534
Query: 454 CASPRAGPGPGGGAGCGGSRFSLGRLYGSRRSCLWRSRSGSVNEAS 499
S G G GGG+ GGS G GS S SGSV E+S
Sbjct: 535 --SGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESS 578
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 36.6 bits (83), Expect = 0.063
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 4 PGSAAGESAAGGGGGGGGPGVSEELTAAAAAAAA 37
PG +G GGGGGGG S T+AAA +AA
Sbjct: 137 PGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAA 170
Score = 34.7 bits (78), Expect = 0.24
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 5 GSAAG----ESAAGGGGGGGGPGVSEELTAAAAAAAADEGPA 42
G AAG +S GGG GGGG G S AA +AAA A
Sbjct: 131 GGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAA 172
Score = 33.1 bits (74), Expect = 0.70
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 3 PPGSAAGESAAGGGGGGGGPGVSEELTAAAAAAAA 37
P + G AGGGGGGG +AAA +AAA
Sbjct: 137 PGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAA 171
Score = 32.0 bits (71), Expect = 1.6
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 4 PGSAAGESAAGGGGGGGGPGVSE------ELTAAAAAAAADEGPA 42
PG G + GGGGG G G S AAAAAA G A
Sbjct: 18 PGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAA 62
Score = 31.6 bits (70), Expect = 2.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 403 GGAGGGYAPSCRYGGVGGPGAAGVA 427
GGAGGGY+ +CR G G AA A
Sbjct: 32 GGAGGGYSSACRPGPRAGGAAAAAA 56
Score = 30.0 bits (66), Expect = 5.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 5 GSAAGESAAGGGGGGGGPGVSEELTAAAAAAAA 37
G G GGGG P + +AAAAAA
Sbjct: 142 GGGGGAGGGGGGGSSSSPAATSAAATSAAAAAA 174
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 36.6 bits (83), Expect = 0.063
Identities = 29/101 (28%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPY-----------RRSCEHCQRAVSSSSI 445
G G+ CGG G G C G GG G++ P SC C S
Sbjct: 23 GCGSGCGGCGSGCG-GCG-SGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGG 80
Query: 446 FSRSALSICASPRAGPGPGGGAGCGGSRFSLGRLYGSRRSC 486
+ S G GG CGGS+ G GS+ C
Sbjct: 81 YGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 121
Score = 35.8 bits (81), Expect = 0.11
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 17/91 (18%)
Query: 402 CGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICASPRAGP 461
CGG+ GGY SC GG G G + C C S+ C + G
Sbjct: 74 CGGSKGGYG-SC--GGSKG-GCVSCGGSKGGCGSCGG--------SKGGCGSCGGSKGGC 121
Query: 462 GPGGGA-----GCGGSRFSLGRLYGSRRSCL 487
G GG+ CGGS+ G GS+ C+
Sbjct: 122 GSCGGSKGGCVSCGGSKGGCGSCGGSKGGCV 152
Score = 35.4 bits (80), Expect = 0.14
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 402 CGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHC--QRAVSSSSIFSRSALSICASPRA 459
CGG+ GG SC G GG G+ G + + C C + S S+ C +
Sbjct: 84 CGGSKGGCV-SCG-GSKGGCGSCGGS--KGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKG 139
Query: 460 GPGPGGGA-----GCGGSRFSLGRLYGSRRSC 486
G G GG+ CGGS+ G GS+ C
Sbjct: 140 GCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGC 171
Score = 35.4 bits (80), Expect = 0.14
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 402 CGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHC--QRAVSSSSIFSRSALSICASPRA 459
CGG+ GG SC G GG G+ G + + C C + S S+ C +
Sbjct: 104 CGGSKGGCG-SCG-GSKGGCGSCGGS--KGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKG 159
Query: 460 GPGPGGGA-----GCGGSRFSLGRLYGSRRSC 486
G G GG+ CGGS+ G GS+ C
Sbjct: 160 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 191
Score = 35.0 bits (79), Expect = 0.18
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 17/105 (16%)
Query: 397 GLGTRCGGAG---GGYAPSCRYGGVG---GPGAAGVAPYRRSC----EHCQRAVSSSSIF 446
G G+ CGG G GG C GG G G +G SC C+
Sbjct: 9 GCGSGCGGCGSGCGGCGSGC--GGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPAC 66
Query: 447 SRSALSICASPRAGPGPGGGA-----GCGGSRFSLGRLYGSRRSC 486
S S+ C + G G GG+ CGGS+ G GS+ C
Sbjct: 67 SCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGC 111
Score = 33.9 bits (76), Expect = 0.41
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 402 CGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHC--QRAVSSSSIFSRSALSICASPRA 459
CGG+ GG SC G GG G+ G + + C C + S S+ C +
Sbjct: 94 CGGSKGGCG-SCG-GSKGGCGSCGGS--KGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKG 149
Query: 460 G----PGPGGGAG-CGGSRFSLGRLYGSRRSC 486
G G GG G CGGS+ G GS+ C
Sbjct: 150 GCVSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 181
Score = 32.0 bits (71), Expect = 1.6
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 17/90 (18%)
Query: 402 CGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSIFSRSALSICASPRAGP 461
CGG+ GG SC G GG G+ G + + C C S+ C + G
Sbjct: 124 CGGSKGGCV-SCG-GSKGGCGSCGGS--KGGCVSCGG--------SKGGCGSCGGSKGGC 171
Query: 462 GPGGGA-----GCGGSRFSLGRLYGSRRSC 486
G GG+ CGGS+ G S+ SC
Sbjct: 172 GSCGGSKGGCGSCGGSKGGCGSCGCSQCSC 201
>gi|145309320 forkhead box Q1 [Homo sapiens]
Length = 403
Score = 36.2 bits (82), Expect = 0.082
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Query: 5 GSAAGESAAGGGGG-----------GGGPGVSEELTAAAAAAAADEG 40
G A S A GGG GGGPG E + AAAAAA EG
Sbjct: 44 GDCAANSPAAGGGARDTQGDGEQSAGGGPGAEEAIPAAAAAAVVAEG 90
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 36.2 bits (82), Expect = 0.082
Identities = 37/118 (31%), Positives = 44/118 (37%), Gaps = 21/118 (17%)
Query: 397 GLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAPYRRSCEHCQRAVSSSSI----FSRSALS 452
G G+ CGG G G YGG G V + C C A S SS S+
Sbjct: 16 GCGSSCGGCGSG------YGGCGSGCCVPVCCCKPVC-CCVPACSCSSCGSCGGSKGVCG 68
Query: 453 ICASPRAGPGPGGGA--GCGGS-------RFSLGRLYGSRRSCLWRSRS-GSVNEASC 500
C + G G GG+ GCG S S G GS+ C +R S G C
Sbjct: 69 SCGGCKGGCGSCGGSKGGCGSSCCVPVCCSSSCGSCGGSKGVCGFRGGSKGGCGSCGC 126
>gi|239754438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 709
Score = 35.8 bits (81), Expect = 0.11
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 328 HVEKLFGLEGPGSASSAGGG----LSPSDELLPPLT---HRLPRVNTVDSTE----LEWH 376
H E + GL+ G SS G LS S L P + R P V +D + L+
Sbjct: 18 HAEMVPGLQAVGVRSSRRSGRSAQLSASTSLCPAVEVVGERAPLVLGLDLRQQRAALDRE 77
Query: 377 IRSN--QQLVPSYSEAVLMDLAGLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAP 428
+ + ++L+P+ + L D AG+G G G +P GG GG G G AP
Sbjct: 78 LAGDGPRRLLPALGRSALGDWAGIGHPLGWGLLGGSPGAA-GGRGGHGLEGTAP 130
>gi|239748928 PREDICTED: hypothetical protein XP_002346859 [Homo
sapiens]
Length = 709
Score = 35.8 bits (81), Expect = 0.11
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 328 HVEKLFGLEGPGSASSAGGG----LSPSDELLPPLT---HRLPRVNTVDSTE----LEWH 376
H E + GL+ G SS G LS S L P + R P V +D + L+
Sbjct: 18 HAEMVPGLQAVGVRSSRRSGRSAQLSASTSLCPAVEVVGERAPLVLGLDLRQQRAALDRE 77
Query: 377 IRSN--QQLVPSYSEAVLMDLAGLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAP 428
+ + ++L+P+ + L D AG+G G G +P GG GG G G AP
Sbjct: 78 LAGDGPRRLLPALGRSALGDWAGIGHPLGWGLLGGSPGAA-GGRGGHGLEGTAP 130
>gi|239742950 PREDICTED: hypothetical protein XP_002342702 [Homo
sapiens]
Length = 709
Score = 35.8 bits (81), Expect = 0.11
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 328 HVEKLFGLEGPGSASSAGGG----LSPSDELLPPLT---HRLPRVNTVDSTE----LEWH 376
H E + GL+ G SS G LS S L P + R P V +D + L+
Sbjct: 18 HAEMVPGLQAVGVRSSRRSGRSAQLSASTSLCPAVEVVGERAPLVLGLDLRQQRAALDRE 77
Query: 377 IRSN--QQLVPSYSEAVLMDLAGLGTRCGGAGGGYAPSCRYGGVGGPGAAGVAP 428
+ + ++L+P+ + L D AG+G G G +P GG GG G G AP
Sbjct: 78 LAGDGPRRLLPALGRSALGDWAGIGHPLGWGLLGGSPGAA-GGRGGHGLEGTAP 130
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,972,372
Number of Sequences: 37866
Number of extensions: 1335630
Number of successful extensions: 16916
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 12981
Number of HSP's gapped (non-prelim): 3292
length of query: 566
length of database: 18,247,518
effective HSP length: 108
effective length of query: 458
effective length of database: 14,157,990
effective search space: 6484359420
effective search space used: 6484359420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.