Guide to the Human Genome
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Name: BHLHE22 Sequence: fasta or formatted (381aa) NCBI GI: 22748877
Description:

basic helix-loop-helix domain containing, class B, 5

Referenced in:

Oligodendrocytes and Myelin
Helix-Loop-Helix Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.0         57           9
 C cysteine            2.1          8           1
 D aspartate           3.4         13           3
 E glutamate           5.0         19           2
 F phenylalanine       1.3          5           1
 G glycine            17.1         65           7
 H histidine           1.8          7           1
 I isoleucine          1.3          5           1
 K lysine              3.7         14           2
 L leucine            10.5         40           3
 M methionine          1.6          6           1
 N asparagine          1.8          7           1
 P proline             7.6         29           3
 Q glutamine           2.1          8           1
 R arginine            4.7         18           3
 S serine             15.2         58           9
 T threonine           1.0          4           1
 V valine              3.1         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   basic helix-loop-helix domain containing, class B, 5... 
BHLHE23               0.209   basic helix-loop-helix domain containing, class B, 4...
OLIG2                 0.155   oligodendrocyte lineage transcription factor 2 [Homo...
OLIG3                 0.121   oligodendrocyte transcription factor 3 
OLIG1                 0.086   oligodendrocyte transcription factor 1 
TWIST1                0.085   twist 
LOR                   0.075   loricrin 
KRT10                 0.067   keratin 10 
AEBP2                 0.064   AE binding protein 2 isoform b 
AEBP2                 0.064   AE binding protein 2 isoform a 
ARID1B                0.063   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.063   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.063   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
KRT9                  0.062   keratin 9 
ZNF503                0.060   zinc finger protein 503 
IRS4                  0.059   insulin receptor substrate 4 
KRT1                  0.058   keratin 1 
MSC                   0.058   musculin 
NEUROD2               0.053   neurogenic differentiation 2 
DMKN                  0.053   dermokine isoform 4 precursor 
DMKN                  0.053   dermokine isoform 5 precursor 
DMKN                  0.053   dermokine isoform 3 precursor 
DMKN                  0.053   dermokine isoform 2 precursor 
ZSWIM6                0.053   zinc finger, SWIM-type containing 6 
KRT2                  0.052   keratin 2 
NEUROG2               0.052   neurogenin 2 
BHLHA15               0.051   basic helix-loop-helix family, member a15 
ATOH1                 0.051   atonal homolog 1 
C6orf174              0.049   hypothetical protein LOC387104 
NEUROD4               0.048   neurogenic differentiation 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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