Guide to the Human Genome
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Name: TMEM151B Sequence: fasta or formatted (566aa) NCBI GI: 212274327
Description:

transmembrane protein 151B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         61           8
 C cysteine            3.9         22           1
 D aspartate           3.4         19           3
 E glutamate           6.5         37           3
 F phenylalanine       3.0         17           2
 G glycine            10.2         58           8
 H histidine           3.7         21           1
 I isoleucine          1.4          8           1
 K lysine              1.2          7           1
 L leucine             8.7         49           3
 M methionine          1.8         10           1
 N asparagine          1.8         10           1
 P proline             6.0         34           4
 Q glutamine           2.8         16           2
 R arginine            8.1         46           2
 S serine              9.7         55           4
 T threonine           4.4         25           3
 V valine              6.2         35           1
 W tryptophan          1.8         10           2
 Y tyrosine            4.6         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 151B 
TMEM151A              0.393   transmembrane protein 151A 
EVX2                  0.015   even-skipped homeobox 2 
KRTAP5-1              0.015   keratin associated protein 5-1 
ONECUT2               0.014   one cut domain, family member 2 
KRTAP5-10             0.014   keratin associated protein 5-10 
SLAIN2                0.014   SLAIN motif family, member 2 
HOXD11                0.013   homeobox D11 
LOR                   0.012   loricrin 
HECA                  0.011   headcase 
EN2                   0.011   engrailed homeobox 2 
BHLHE22               0.011   basic helix-loop-helix domain containing, class B, 5...
KRTAP5-5              0.011   keratin associated protein 5-5 
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
NPAS3                 0.010   neuronal PAS domain protein 3 isoform 2 
NPAS3                 0.010   neuronal PAS domain protein 3 isoform 1 
ATAD2B                0.010   ATPase family, AAA domain containing 2B 
MYCN                  0.010   v-myc myelocytomatosis viral related oncogene, neuro...
KRTAP5-7              0.010   keratin associated protein 5-7 
CKAP4                 0.010   cytoskeleton-associated protein 4 
KRT10                 0.010   keratin 10 
ZSWIM6                0.010   zinc finger, SWIM-type containing 6 
KRTAP5-4              0.010   keratin associated protein 5-4 
FOXQ1                 0.010   forkhead box Q1 
KRTAP5-3              0.010   keratin associated protein 5-3 
LOC100293575          0.010   PREDICTED: hypothetical protein 
LOC100290681          0.010   PREDICTED: hypothetical protein XP_002346859 
LOC100287330          0.010   PREDICTED: hypothetical protein XP_002342702 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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