Guide to the Human Genome
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Name: FOXQ1 Sequence: fasta or formatted (403aa) NCBI GI: 145309320
Description:

forkhead box Q1

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.4         74           6
 C cysteine            1.5          6           1
 D aspartate           4.0         16           2
 E glutamate           4.7         19           2
 F phenylalanine       2.7         11           2
 G glycine            11.2         45           3
 H histidine           1.2          5           1
 I isoleucine          1.7          7           1
 K lysine              2.7         11           1
 L leucine             9.2         37           3
 M methionine          1.2          5           1
 N asparagine          2.0          8           1
 P proline            13.6         55           3
 Q glutamine           1.5          6           1
 R arginine            8.7         35           4
 S serine              6.7         27           3
 T threonine           2.5         10           2
 V valine              3.0         12           2
 W tryptophan          1.0          4           1
 Y tyrosine            2.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box Q1 
FOXD2                 0.184   forkhead box D2 
FOXD1                 0.165   forkhead box D1 
FOXF2                 0.161   forkhead box F2 
FOXD3                 0.160   forkhead box D3 
FOXE3                 0.160   forkhead box E3 
FOXE1                 0.149   forkhead box E1 
FOXI2                 0.141   forkhead box I2 
FOXF1                 0.139   forkhead box F1 
FOXC2                 0.136   forkhead box C2 
FOXL2                 0.136   forkhead box L2 
FOXS1                 0.135   forkhead box S1 
FOXA1                 0.134   forkhead box A1 
FOXC1                 0.134   forkhead box C1 
FOXL1                 0.133   forkhead box L1 
FOXD4L3               0.131   forkhead box D4-like 3 
FOXD4L2               0.130   forkhead box D4-like 2 
FOXI3                 0.130   forkhead box I3 
FOXD4L6               0.130   forkhead box D4-like 6 
FOXD4L4               0.130   forkhead box D4-like 4 
FOXD4L1               0.130   forkhead box D4-like 1 
FOXD4L5               0.130   forkhead box D4-like 5 
FOXG1                 0.129   forkhead box G1 
FOXD4                 0.129   forkhead box D4 
FOXA2                 0.129   forkhead box A2 isoform 2 
FOXA2                 0.129   forkhead box A2 isoform 1 
FOXA3                 0.126   forkhead box A3 
FOXI1                 0.125   forkhead box I1 isoform a 
LOC651986             0.121   PREDICTED: similar to forkhead box L2 
LOC651986             0.121   PREDICTED: similar to forkhead box L2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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