BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] (566 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 1174 0.0 gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 1174 0.0 gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 1168 0.0 gi|209977067 OTU domain containing 5 isoform c [Homo sapiens] 716 0.0 gi|223941923 OTU domain containing 1 [Homo sapiens] 69 1e-11 gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 67 3e-11 gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 61 2e-09 gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 60 4e-09 gi|73476377 LBXCOR1 homolog [Homo sapiens] 60 4e-09 gi|126352608 elastin isoform e precursor [Homo sapiens] 59 1e-08 gi|126352446 elastin isoform d precursor [Homo sapiens] 59 1e-08 gi|126352322 elastin isoform c precursor [Homo sapiens] 59 1e-08 gi|126352700 elastin isoform b precursor [Homo sapiens] 59 1e-08 gi|126352440 elastin isoform a precursor [Homo sapiens] 59 1e-08 gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 59 1e-08 gi|149192871 OTU domain containing 3 [Homo sapiens] 59 2e-08 gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 58 2e-08 gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 58 2e-08 gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 58 3e-08 gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 58 3e-08 gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 57 3e-08 gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 57 3e-08 gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 57 5e-08 gi|48762934 alpha 2 type I collagen [Homo sapiens] 56 8e-08 gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 56 8e-08 gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 56 8e-08 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 56 8e-08 gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo s... 55 1e-07 gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo s... 55 1e-07 gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 55 1e-07 >gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] Length = 566 Score = 1174 bits (3038), Expect = 0.0 Identities = 566/566 (100%), Positives = 566/566 (100%) Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR Sbjct: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA Sbjct: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120 Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180 Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240 Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300 Query: 301 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM 360 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM Sbjct: 301 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM 360 Query: 361 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS 420 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS Sbjct: 361 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS 420 Query: 421 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA 480 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA Sbjct: 421 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA 480 Query: 481 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV 540 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV Sbjct: 481 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV 540 Query: 541 LAVSQQEYLDSMKKNKVHRDPPPDKS 566 LAVSQQEYLDSMKKNKVHRDPPPDKS Sbjct: 541 LAVSQQEYLDSMKKNKVHRDPPPDKS 566 >gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] Length = 566 Score = 1174 bits (3038), Expect = 0.0 Identities = 566/566 (100%), Positives = 566/566 (100%) Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR Sbjct: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA Sbjct: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120 Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180 Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240 Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300 Query: 301 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM 360 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM Sbjct: 301 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM 360 Query: 361 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS 420 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS Sbjct: 361 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS 420 Query: 421 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA 480 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA Sbjct: 421 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA 480 Query: 481 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV 540 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV Sbjct: 481 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV 540 Query: 541 LAVSQQEYLDSMKKNKVHRDPPPDKS 566 LAVSQQEYLDSMKKNKVHRDPPPDKS Sbjct: 541 LAVSQQEYLDSMKKNKVHRDPPPDKS 566 >gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] Length = 571 Score = 1168 bits (3022), Expect = 0.0 Identities = 566/571 (99%), Positives = 566/571 (99%), Gaps = 5/571 (0%) Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR Sbjct: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA Sbjct: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120 Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180 Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240 Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300 Query: 301 YST-----EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 355 YST EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA Sbjct: 301 YSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 360 Query: 356 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 415 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ Sbjct: 361 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 420 Query: 416 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 475 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT Sbjct: 421 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 480 Query: 476 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 535 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE Sbjct: 481 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 540 Query: 536 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 566 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS Sbjct: 541 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 571 >gi|209977067 OTU domain containing 5 isoform c [Homo sapiens] Length = 349 Score = 716 bits (1847), Expect = 0.0 Identities = 349/349 (100%), Positives = 349/349 (100%) Query: 218 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 277 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN Sbjct: 1 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 60 Query: 278 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 337 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN Sbjct: 61 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 120 Query: 338 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 397 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV Sbjct: 121 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 180 Query: 398 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 457 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP Sbjct: 181 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 240 Query: 458 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 517 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL Sbjct: 241 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 300 Query: 518 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 566 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS Sbjct: 301 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 349 >gi|223941923 OTU domain containing 1 [Homo sapiens] Length = 481 Score = 68.9 bits (167), Expect = 1e-11 Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 18/238 (7%) Query: 102 PCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161 P PG P GPG A G G G G C PG RR P A Sbjct: 210 PAATPGSPDPGPGPWGEEHLAERGPRGWERG-------GDRCDAPGGDAARRPDPEAEAP 262 Query: 162 GGGSPEREEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKED 221 GS E A A+ A VE+Q+ + + R+K F I D Sbjct: 263 PAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQDKYLRQ--RNKYRFHIIP---D 317 Query: 222 GACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGN 281 G CL+RAV+ VYGDQ +H +R+ + Y+ + D+FS + D +I ++ Sbjct: 318 GNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAG 377 Query: 282 HIEMQAMAEMYNRPVEVY---QYSTEPINT---FHGIHQNEDEPIRVSYHRNIHYNSV 333 + E+ AM +M N + + + + ++T + G + I +S+ N HY++V Sbjct: 378 YPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAV 435 >gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] Length = 1464 Score = 67.4 bits (163), Expect = 3e-11 Identities = 65/181 (35%), Positives = 71/181 (39%), Gaps = 18/181 (9%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPR 62 P K P DA + PPGP PA G G VG G G +G GA R Sbjct: 823 PGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGR 882 Query: 63 ASPP-PQGPL--PGPPGALHRWALAVPPGAVAGP--RPQQASPPPCGGPGGPGGGPGDAL 117 PP P G PGPPG + P G GP RP + PP GP G G PG Sbjct: 883 VGPPGPSGNAGPPGPPGPAGKEGGKGPRGET-GPAGRPGEVGPPGPPGPAGEKGSPGADG 941 Query: 118 GAAAAGV-GAAGV-----VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171 A A G G G+ VVG+ G G G PG S PG G S ER Sbjct: 942 PAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGE----PGKQGPSGASGERGPP 997 Query: 172 G 172 G Sbjct: 998 G 998 Score = 57.4 bits (137), Expect = 3e-08 Identities = 53/151 (35%), Positives = 62/151 (41%), Gaps = 13/151 (8%) Query: 5 PKKKPPPPDADPANEPPPPGPM--PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-P 61 P + P P P P G P AP G G G VG +G G R Sbjct: 412 PGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGA 471 Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRP---QQASPPPCGGPGGPGGGPGDA 116 R P P G LPGPPG PGA VAGP+ ++ SP GP GP G PG+A Sbjct: 472 RGEPGPTG-LPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSP----GPAGPKGSPGEA 526 Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147 AG+ A + G G+ G G PG Sbjct: 527 GRPGEAGLPGAKGLTGSPGSPGPDGKTGPPG 557 Score = 55.5 bits (132), Expect = 1e-07 Identities = 50/158 (31%), Positives = 56/158 (35%), Gaps = 3/158 (1%) Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68 PP D P P P PP P G+G G D G+ P P+ Sbjct: 128 PPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPR 187 Query: 69 GPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAG 128 G LPGPPGA PPG P + P GP GP G GD A G Sbjct: 188 G-LPGPPGAPGPQGFQGPPGEPG--EPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER 244 Query: 129 VVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 G GA G+ G PG R + GA G P Sbjct: 245 GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 282 Score = 54.7 bits (130), Expect = 2e-07 Identities = 58/178 (32%), Positives = 65/178 (36%), Gaps = 35/178 (19%) Query: 19 EPPPPGPMPPA-----PRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPPPQGPL 71 EP PPGP A P G G G G G+ G G GAR + P G Sbjct: 372 EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP-----GFPGARGPSGPQGPGGP 426 Query: 72 PGP---------PGALHRWALAVPPGAVA-----------GPRPQQASPPPCGGPGGPG- 110 PGP PG+ PG V G R + P P G PG PG Sbjct: 427 PGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGE 486 Query: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166 GGPG A GV G G+ G G PG + R +A GA G GSP Sbjct: 487 RGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP 544 Score = 54.7 bits (130), Expect = 2e-07 Identities = 59/172 (34%), Positives = 62/172 (36%), Gaps = 16/172 (9%) Query: 9 PPPPDADPAN-----EPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62 PP P + EP P G P PP R G G G GV G G G R Sbjct: 459 PPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAG-----PKGPAGER-- 511 Query: 63 ASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122 SP P GP G PG R A PGA G SP P G G PG D Sbjct: 512 GSPGPAGP-KGSPGEAGRPGEAGLPGA-KGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPG 569 Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174 GA G GV G G G PG + R GAVG + E G Sbjct: 570 PPGARG-QAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQG 620 Score = 53.9 bits (128), Expect = 4e-07 Identities = 60/183 (32%), Positives = 65/183 (35%), Gaps = 25/183 (13%) Query: 9 PPPPDADPAN--EPPPPGPMPPAPRRG-----------GGVGVGGGGTGVGGGDRDRDSG 55 PP P P + E P GP P RG G G G G + G Sbjct: 771 PPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPG 830 Query: 56 VVGARPRASPP-PQGPL--PGP------PGALHRWALAVPPGAVAGP-RPQQASPPPCGG 105 GA+ A PP P GP PGP PGA A PPGA P + PP G Sbjct: 831 DAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSG 890 Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGG 164 GP G PG A G G G VG G GP K A G GA G Sbjct: 891 NAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPG-PPGPAGEKGSPGADGPAGAPGTP 949 Query: 165 SPE 167 P+ Sbjct: 950 GPQ 952 Score = 51.6 bits (122), Expect = 2e-06 Identities = 57/186 (30%), Positives = 68/186 (36%), Gaps = 34/186 (18%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 P K PP PA + PGP P RG +G G G+ + A R Sbjct: 549 PDGKTGPP--GPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGK------AGERGV 600 Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG-----GPGGGPGDALGA 119 P P G + GP G PPG AGP ++ P G PG GP G PG+A Sbjct: 601 PGPPGAV-GPAGKDGEAGAQGPPGP-AGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKP 658 Query: 120 AAAGV----GAAGV--------------VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161 GV GA G V G G G G PG+ + A GA Sbjct: 659 GEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAP 718 Query: 162 GG-GSP 166 G G+P Sbjct: 719 GSQGAP 724 Score = 51.6 bits (122), Expect = 2e-06 Identities = 63/213 (29%), Positives = 75/213 (35%), Gaps = 50/213 (23%) Query: 7 KKPPPPDADPANEPPPPGPMP----------PAPR-------RGGGVGVGGGGTGVGGGD 49 K PP A P PPGP P P+ + G GV G VG Sbjct: 552 KTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAG 611 Query: 50 RDRDSGVVG----ARPRASPPPQGP--------LP---GPPGALHRWALAVPPGAVAGPR 94 +D ++G G A P QGP LP GPPG + PG + P Sbjct: 612 KDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG 671 Query: 95 PQQA-------------SPPPCGGPGGPGGGPGD--ALG-AAAAGVGAAGVVVGVGGAVG 138 P A PP GP G G PG+ A G A A G + G+ G G Sbjct: 672 PSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPG 731 Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171 G PG R A GA GSP ++ V Sbjct: 732 ERGAAGLPGPKGDRGDAGPKGA--DGSPGKDGV 762 Score = 51.2 bits (121), Expect = 2e-06 Identities = 67/208 (32%), Positives = 74/208 (35%), Gaps = 39/208 (18%) Query: 5 PKKKPPPPDADPA----------NEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDR 52 PK +P P + A E PG PA RG G G G G Sbjct: 285 PKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPG 344 Query: 53 DSGVVGAR-------PRASPPPQGPL--PGPPGALHRWALAVPPGAVAGP-------RPQ 96 G VGA+ PR S PQG PGPPG A PGA P P Sbjct: 345 FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPG 404 Query: 97 QASPP-------PCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147 A P P G GPGGP G G++ A G G G VGV G GP Sbjct: 405 IAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQG-PPGPA 463 Query: 148 HSKRRRQAPG-VGAVGGGSPEREEVGAG 174 + +R A G G G P E G G Sbjct: 464 GEEGKRGARGEPGPTGLPGPPGERGGPG 491 Score = 51.2 bits (121), Expect = 2e-06 Identities = 55/188 (29%), Positives = 60/188 (31%), Gaps = 28/188 (14%) Query: 10 PPPDADPANEPP--------PPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGA 59 P P +P + P PPGPM P G G G G G RD G G Sbjct: 976 PGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGD 1035 Query: 60 RPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--------GPGGPGG 111 R P PG PGA V P +G R + P G GP GP G Sbjct: 1036 RGETGPAGPPGAPGAPGA----PGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQG 1091 Query: 112 GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171 GD G G G G G PG Q P GA G P Sbjct: 1092 PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPG-----EQGPS-GASGPAGPRGPPG 1145 Query: 172 GAGYNSED 179 AG +D Sbjct: 1146 SAGAPGKD 1153 Score = 50.4 bits (119), Expect = 4e-06 Identities = 56/181 (30%), Positives = 61/181 (33%), Gaps = 16/181 (8%) Query: 4 LPKKKPPPPDADPANEPPPPG---------PM-PPAPRRGGGVGVGGGGTGVGGGDRDRD 53 LP K DA P PG P+ PP P G G +G G R Sbjct: 738 LPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGAR- 796 Query: 54 SGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--GPGGPGG 111 G G R PP GPPGA + PG AG + P P G GP GP G Sbjct: 797 -GAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGD-AGAKGDAGPPGPAGPAGPPGPIG 854 Query: 112 GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171 G A G G GA G G GP + PG GG R E Sbjct: 855 NVGAPGAKGARGSAGPPGATGFPGAAGRVG-PPGPSGNAGPPGPPGPAGKEGGKGPRGET 913 Query: 172 G 172 G Sbjct: 914 G 914 Score = 50.1 bits (118), Expect = 6e-06 Identities = 59/182 (32%), Positives = 66/182 (36%), Gaps = 28/182 (15%) Query: 5 PKKKPPPPDA-------DPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSG 55 P+ P PP A P EP PG P RG G G G G R + G Sbjct: 186 PRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERG 245 Query: 56 VVGARPRASPPPQGPLPGPPGALHRWAL----AVPPGAVAGPRPQQASPPPCGGPG--GP 109 G + P LPG G HR A AGP+ + SP G PG GP Sbjct: 246 PPGPQGARGLPGTAGLPGMKG--HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP 303 Query: 110 GGGPGDALGAAAAG-VGAAG--VVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGGS 165 G PG+ A G GA G G G G G PG PG VGA G Sbjct: 304 RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGF-------PGAVGAKGEAG 356 Query: 166 PE 167 P+ Sbjct: 357 PQ 358 Score = 46.6 bits (109), Expect = 6e-05 Identities = 54/200 (27%), Positives = 64/200 (32%), Gaps = 27/200 (13%) Query: 22 PPGPMPP-----APRRGGGVGVGG--------GGTGVGGGDRDRDS----GVVGARPRAS 64 PPGP P AP G G G G G+ G +R + G G R A Sbjct: 690 PPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAG 749 Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPP-----PCGGPGGPG-----GGPG 114 P PG G PPG P + S P P G G PG G PG Sbjct: 750 PKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPG 809 Query: 115 DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174 A A G G G G G PG + +G VG + AG Sbjct: 810 PAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAG 869 Query: 175 YNSEDEYEAAAARIEAMDPA 194 + AA R+ P+ Sbjct: 870 PPGATGFPGAAGRVGPPGPS 889 Score = 40.4 bits (93), Expect = 0.004 Identities = 52/179 (29%), Positives = 63/179 (35%), Gaps = 17/179 (9%) Query: 16 PANEPPPPGPMPP--APRRGGGVGVGG--GGTGVGG--GDRDRDSGVVGARPRASPPPQG 69 PA E PGP P +P G G G G G+ G G D P G Sbjct: 507 PAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPG 566 Query: 70 PLPGPPGALHRWALAVPPGAV-AGPRPQQASPPPCGGPGGPGGGPGDALGAAAAG----V 124 P PGPPGA + + PG A P +A GP G G G A A G Sbjct: 567 P-PGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPA 625 Query: 125 GAAGV-----VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178 G AG G G G+ G PG + + + G +G P G+ E Sbjct: 626 GPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGE 684 Score = 40.0 bits (92), Expect = 0.006 Identities = 48/149 (32%), Positives = 55/149 (36%), Gaps = 47/149 (31%) Query: 11 PPDADPANEPPPPGPMPPAPRRG-----GGVGVGG-----GGTGVGG-----GDRDR--- 52 PP A A P PGP+ PA + G G G G G G G GD+ Sbjct: 1044 PPGAPGA--PGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGE 1101 Query: 53 --DSGVVGAR----------PRASPPPQGPL-----------PGPPGALHRWALAVPPGA 89 D G+ G R P SP QGP PG GA + L PG Sbjct: 1102 QGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGP 1161 Query: 90 VA--GPRPQQASPPPCGGPG--GPGGGPG 114 + GPR + P G PG GP G PG Sbjct: 1162 IGPPGPRGRTGDAGPVGPPGPPGPPGPPG 1190 Score = 38.9 bits (89), Expect = 0.013 Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 13/79 (16%) Query: 9 PPPPDADPANEPP-----PPGPMPP-----APRRGGGVGVGGGGTGVGGGDRDRDSGVVG 58 PP P P + P P GP P AP + G G+ G G R D+G VG Sbjct: 1119 PPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVG 1178 Query: 59 ARPRASPPPQGPLPGPPGA 77 P P P GP PGPP A Sbjct: 1179 --PPGPPGPPGP-PGPPSA 1194 Score = 36.6 bits (83), Expect = 0.063 Identities = 43/132 (32%), Positives = 47/132 (35%), Gaps = 27/132 (20%) Query: 43 TGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102 TGV G D +G G R A PP + +PG PG L PPG PP Sbjct: 108 TGVEGPKGD--TGPRGPRGPAGPPGRDGIPGQPG------LPGPPG-----------PPG 148 Query: 103 CGGPGGPGGGPGDALGAAAAGVGAAGV-VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161 GP G GG L G+ V G G G G PG APG Sbjct: 149 PPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPG-------APGPQGF 201 Query: 162 GGGSPEREEVGA 173 G E E GA Sbjct: 202 QGPPGEPGEPGA 213 >gi|4826998 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Homo sapiens] Length = 707 Score = 61.2 bits (147), Expect = 2e-09 Identities = 60/217 (27%), Positives = 76/217 (35%), Gaps = 49/217 (22%) Query: 6 KKKPPPPDADPANEPPPPGP----------MPPAPRRGGGVGV----GGGGTGVGGGDRD 51 +++ PPP P +PPP P PP P + V G GVG Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPA 127 Query: 52 RDSGVVGARPRASPPP---QGPLPGPPGALHRWALAVPPGA----------------VAG 92 S P + PP GP P PP A+ + PPGA G Sbjct: 128 SSSAPPATPPTSGAPPGSGPGPTPTPPPAV----TSAPPGAPPPTPPSSGVPTTPPQAGG 183 Query: 93 PRPQQASPPPCG-------GPGGPGGG--PGDALGAAAAGVGAAG---VVVGVGGAVGVG 140 P P A+ P G GPGGP GG PG G+ G GG G Sbjct: 184 PPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRG 243 Query: 141 GCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNS 177 G P + ++ Q P G GG S E+ G+ + Sbjct: 244 GRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280 Score = 36.6 bits (83), Expect = 0.063 Identities = 35/96 (36%), Positives = 40/96 (41%), Gaps = 27/96 (28%) Query: 2 TILPKK--KPPPPDADPANEPPP---PGP-------MPPAPRRGGGVGVGGGGTGVGGGD 49 T P+ PPPP A P P P PGP MP P+ GGG G+ + GG Sbjct: 176 TTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGL----STPGGHP 231 Query: 50 RDRDSGVVGARPRAS----PP-----PQGPLPGPPG 76 + G G PR PP QGP PG PG Sbjct: 232 KPPHRG--GGEPRGGRQHHPPYHQQHHQGPPPGGPG 265 Score = 33.9 bits (76), Expect = 0.41 Identities = 47/144 (32%), Positives = 49/144 (34%), Gaps = 19/144 (13%) Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG--------PPGALHRWALA 84 GGG GGG G GG D S G + P GP PG PP H+ Sbjct: 13 GGGFHRRGGGGG-RGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQ 71 Query: 85 VPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144 PP P PQQ PPP P P V G G A GVG S Sbjct: 72 PPP---QQPPPQQ--PPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVG---S 123 Query: 145 GPGHSKRRRQA--PGVGAVGGGSP 166 P S A P GA G P Sbjct: 124 APPASSSAPPATPPTSGAPPGSGP 147 >gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] Length = 1466 Score = 60.5 bits (145), Expect = 4e-09 Identities = 61/167 (36%), Positives = 69/167 (41%), Gaps = 27/167 (16%) Query: 22 PPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRD----SGVVGARPRASPP-PQGP-- 70 PPG P P P+ G GG G G +R +G G R A PP P+G Sbjct: 649 PPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKG 708 Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GGPGDALGAAAAGVGAAG 128 GPPG PPGA AG Q P GG G PG G G+ G A GV Sbjct: 709 AAGPPG---------PPGA-AGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKD 758 Query: 129 VVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP-EREEVG 172 G G +G G PG K APG+ + G GSP ER E G Sbjct: 759 GPRGPTGPIGPPGPAGQPG-DKGEGGAPGLPGIAGPRGSPGERGETG 804 Score = 57.8 bits (138), Expect = 3e-08 Identities = 50/158 (31%), Positives = 57/158 (36%), Gaps = 17/158 (10%) Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69 PP A P P GP P +G GG G +G GAR PP Sbjct: 838 PPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGA----------AGFPGARGLPGPPGSN 887 Query: 70 PLPGPPGALHRWALAVPPGAVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAA 127 PGPPG PPG P +P P GP G G PG+ A G A Sbjct: 888 GNPGPPGPSGSPGKDGPPG----PAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGA 943 Query: 128 GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165 +G+ G G G PG R +PG V G S Sbjct: 944 PGPLGIAGITGARGLAGPPG-MPGPRGSPGPQGVKGES 980 Score = 55.8 bits (133), Expect = 1e-07 Identities = 53/162 (32%), Positives = 60/162 (37%), Gaps = 14/162 (8%) Query: 23 PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHR 80 PGPM P AP G G+ G G G D R S P PP PG PGA Sbjct: 296 PGPMGPRGAPGERGRPGLPGAA-GARGNDGARGSDGQPGPP--GPPGTAGFPGSPGAKGE 352 Query: 81 WALAVPPGAVAGPRPQQASPPPCG--------GPGGPGGGPGDALGAAAAGVGAAGVVVG 132 A PG+ P Q+ P P G GP G G PG AG+ A ++G Sbjct: 353 VGPAGSPGSNGAP-GQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMG 411 Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174 G G G PG + GA G P E AG Sbjct: 412 ARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAG 453 Score = 53.9 bits (128), Expect = 4e-07 Identities = 54/174 (31%), Positives = 61/174 (35%), Gaps = 23/174 (13%) Query: 8 KPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP- 65 KP PP + + P PPGP P + G G G G G G P+ P Sbjct: 550 KPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPG 609 Query: 66 -----PPQGPLPGPPGALHRWALAVPPG--------AVAGPRPQQASPPPCGGPGGPGGG 112 PQGP PGP G PPG GP P + P GP G G Sbjct: 610 KNGETGPQGP-PGPTGPGGDKGDTGPPGPQGLQGLPGTGGP-PGENGKPGEPGPKGDAGA 667 Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 PG G AG G+ GA G+ G PG G GA G P Sbjct: 668 PGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPG------PEGGKGAAGPPGP 715 Score = 52.8 bits (125), Expect = 9e-07 Identities = 59/194 (30%), Positives = 70/194 (36%), Gaps = 27/194 (13%) Query: 19 EPPPPGP-----MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73 +P PPGP P +P G VG G G + + G G PP + G Sbjct: 331 QPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGING 390 Query: 74 PPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GGPGDALGAAAAGV------- 124 PG A PGA G + P P G G PG GG G+ A G Sbjct: 391 SPGGKGEMGPAGIPGA-PGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGER 449 Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG----AGYNSEDE 180 G AG + GV GA G G PG PG + G + ER G AG N Sbjct: 450 GEAG-IPGVPGAKGEDGKDGSPGE-------PGANGLPGAAGERGAPGFRGPAGPNGIPG 501 Query: 181 YEAAAARIEAMDPA 194 + A A PA Sbjct: 502 EKGPAGERGAPGPA 515 Score = 52.4 bits (124), Expect = 1e-06 Identities = 59/177 (33%), Positives = 65/177 (36%), Gaps = 26/177 (14%) Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA--------- 59 PP P+ PPGP P A G G+ G G+G D G G Sbjct: 700 PPGPEGGKG-AAGPPGP-PGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGK 757 Query: 60 -RPRASPPPQGPLPGPPGALHRWALAVPPG--AVAGP------RPQQASPPPCGGPGGPG 110 PR P GP PGP G PG +AGP R + P P G PG PG Sbjct: 758 DGPRGPTGPIGP-PGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPG 816 Query: 111 --GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAP-GVGAVG 162 G PG A G G GV G G G PG K R +P G GA G Sbjct: 817 QNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAG 873 Score = 51.2 bits (121), Expect = 2e-06 Identities = 55/171 (32%), Positives = 65/171 (38%), Gaps = 18/171 (10%) Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRA 63 P PP ++ P PPGP +P + G G G G GV G D P A Sbjct: 881 PGPPGSNG--NPGPPGP-SGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937 Query: 64 SPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122 PP P P G G LA PPG + GPR SP P G G G + L Sbjct: 938 QGPPGAPGPLGIAGITGARGLAGPPG-MPGPR---GSPGPQGVKGESGKPGANGLSGERG 993 Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173 G G + G+ G G G PG PG GG +R E G+ Sbjct: 994 PPGPQG-LPGLAGTAGEPGRDGNPGSD----GLPGRDGSPGGKGDRGENGS 1039 Score = 50.4 bits (119), Expect = 4e-06 Identities = 50/144 (34%), Positives = 57/144 (39%), Gaps = 25/144 (17%) Query: 14 ADPANEPPP------PGPMPPAPRRG-----GGVGVGG-----GGTGVGGGDRDR-DSGV 56 A PA P P PGP P +G G G+ G G G G G Sbjct: 1070 AGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGA 1129 Query: 57 VG----ARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG- 111 +G A PR P GP PG G PPG G R ++ S G PG PG Sbjct: 1130 IGSPGPAGPRGPVGPSGP-PGKDGTSGHPGPIGPPGP-RGNRGERGSEGSPGHPGQPGPP 1187 Query: 112 GPGDALGAAAAGVGAAGVVVGVGG 135 GP A G GVGAA + G+GG Sbjct: 1188 GPPGAPGPCCGGVGAAAI-AGIGG 1210 Score = 50.1 bits (118), Expect = 6e-06 Identities = 51/152 (33%), Positives = 57/152 (37%), Gaps = 13/152 (8%) Query: 6 KKKPPPPDAD--PANEPP--PPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 K +P P AD P + P P GP+ PP P G GG G+ G R G G R Sbjct: 743 KGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPR--GSPGER 800 Query: 61 PRASPPPQGPLPGPPGALH----RWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-D 115 PP PG PG + P G P A PP GP GP G G Sbjct: 801 GETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVK 860 Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147 + G GAAG G G G G PG Sbjct: 861 GERGSPGGPGAAG-FPGARGLPGPPGSNGNPG 891 Score = 48.5 bits (114), Expect = 2e-05 Identities = 52/173 (30%), Positives = 61/173 (35%), Gaps = 14/173 (8%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGARP 61 P P P A PP P AP GG G G G G G +R ++G+ G Sbjct: 400 PAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPG 459 Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121 + PG PGA PGA AG R P GP GP G PG+ A Sbjct: 460 AKGEDGKDGSPGEPGANGL------PGA-AGER----GAPGFRGPAGPNGIPGEKGPAGE 508 Query: 122 AGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174 G G G G G GPG G G+ G P + +G Sbjct: 509 RGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESG 561 Score = 48.1 bits (113), Expect = 2e-05 Identities = 48/157 (30%), Positives = 54/157 (34%), Gaps = 16/157 (10%) Query: 20 PPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRD----SGVVGARPRASPPPQGPLPG 73 P PGP P P + G G G G TG GG D G+ G PP + PG Sbjct: 599 PGGPGPQGP-PGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPG 657 Query: 74 PPGALHRWALAVPPGAVA--------GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVG 125 PG PG GP P A P G GP G G A G Sbjct: 658 EPGPKGDAGAPGAPGGKGDAGAPGERGP-PGLAGAPGLRGGAGPPGPEGGKGAAGPPGPP 716 Query: 126 AAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162 A G+ G G G PG + + G GA G Sbjct: 717 GAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADG 753 Score = 47.8 bits (112), Expect = 3e-05 Identities = 50/169 (29%), Positives = 54/169 (31%), Gaps = 15/169 (8%) Query: 4 LPKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARP 61 LP P E PPGP P AP + G G G G GV G P Sbjct: 787 LPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAG--P 844 Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG----GPGGPGGGPGDAL 117 P GP PGP G PGA P + PP GP GP G PG Sbjct: 845 PGGSGPAGP-PGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDG 903 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 AG G G+ GV G G + G G P Sbjct: 904 PPGPAGN------TGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGP 946 Score = 47.4 bits (111), Expect = 4e-05 Identities = 51/171 (29%), Positives = 61/171 (35%), Gaps = 15/171 (8%) Query: 17 ANEPPPPGPM--------PPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRAS-- 64 + E PPGP P R G G G G G GG DR P A Sbjct: 989 SGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGH 1048 Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGV 124 P P GP+ GP G + P G P P + P GP GP G G+ AAG+ Sbjct: 1049 PGPPGPV-GPAGKSGDRGESGPAGPAGAPGPAGSRGAP--GPQGPRGDKGETGERGAAGI 1105 Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175 G GA G G G A G VG P ++ +G+ Sbjct: 1106 KGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGH 1156 Score = 41.6 bits (96), Expect = 0.002 Identities = 49/187 (26%), Positives = 57/187 (30%), Gaps = 33/187 (17%) Query: 9 PPPPDADPANEPPPPGPMPPA----PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 PP P P P P P P G G G G +G G R Sbjct: 178 PPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPG 237 Query: 65 PPPQGPLPGPPGALHRWALAVPPG-----------------AVAGPRPQQASPPPCGGPG 107 P + LPGPPG + PG G + + P G PG Sbjct: 238 RPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPG 297 Query: 108 --GPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165 GP G PG+ G+ A G GA G G PG PG G Sbjct: 298 PMGPRGAPGE---RGRPGLPGAAGARGNDGARGSDGQPGPPG-------PPGTAGFPGSP 347 Query: 166 PEREEVG 172 + EVG Sbjct: 348 GAKGEVG 354 Score = 37.4 bits (85), Expect = 0.037 Identities = 44/162 (27%), Positives = 52/162 (32%), Gaps = 9/162 (5%) Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69 P + A P PG + G G G G+R A P P +G Sbjct: 445 PRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKG 504 Query: 70 PLP--GPPGALHRWALAVPPG--AVAGPRPQQASPPPCGGPG-----GPGGGPGDALGAA 120 P G PG A PG V G + P GGPG GP G G++ Sbjct: 505 PAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPG 564 Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162 G GV G G G PG + R G G G Sbjct: 565 PPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQG 606 Score = 36.2 bits (82), Expect = 0.082 Identities = 50/172 (29%), Positives = 57/172 (33%), Gaps = 25/172 (14%) Query: 8 KPPPPDADPANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62 +PP P N P GP P P R G G+ G G G G Sbjct: 90 QPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGS------PGPPGICES 143 Query: 63 ASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122 PQ P + +AV G +AG P A PP GP G G PG Sbjct: 144 CPTGPQNYSPQYDSYDVKSGVAV--GGLAG-YPGPAGPPGPPGPPGTSGHPGSPGSPGYQ 200 Query: 123 G----VGAAGV--VVGVGGAVGVGGCCSGPGHSKR-----RRQAPGVGAVGG 163 G G AG G GA+G G G S R R PG + G Sbjct: 201 GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKG 252 Score = 32.0 bits (71), Expect = 1.6 Identities = 46/171 (26%), Positives = 58/171 (33%), Gaps = 30/171 (17%) Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68 P PP A PP G P P+ G G+ G R+ D G+ G P Sbjct: 89 PQPPTAPTR---PPNGQGPQGPKGDPGP------PGIPG--RNGDPGIPGQ------PGS 131 Query: 69 GPLPGPPGALHRWALAVPPGAVAGPR---PQQASPPPCGGP--GGPGGGPGDALGAAAAG 123 PGPPG + GP+ PQ S G GG G PG A G Sbjct: 132 PGSPGPPG--------ICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPG 183 Query: 124 VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174 G G+ G G PG + GA+G P ++ +G Sbjct: 184 PPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESG 234 >gi|73476377 LBXCOR1 homolog [Homo sapiens] Length = 921 Score = 60.5 bits (145), Expect = 4e-09 Identities = 55/171 (32%), Positives = 64/171 (37%), Gaps = 22/171 (12%) Query: 9 PPPPDADPANEPP---PPGPMPPAPRRGGGVGVGGGGT----GVGGGDRDRDSGVVGARP 61 PPP + E PPGP PP P+RG G+ G G G GGG R V+ Sbjct: 276 PPPHKSLRCGEDEAAGPPGPPPPHPQRGLGLATGASGPAGPGGPGGGAGVRSYPVIPVPS 335 Query: 62 RAS------PPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG 114 + PPP P P G P A P AG P GGPG GG G Sbjct: 336 KGFGLLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGE--------PKGGPGTGSGGGG 387 Query: 115 DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165 G A G GA+ + G G G G G S + A V A + Sbjct: 388 AGTGGGAGGPGASHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAA 438 Score = 39.7 bits (91), Expect = 0.007 Identities = 45/169 (26%), Positives = 52/169 (30%), Gaps = 4/169 (2%) Query: 4 LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63 L +K PPP P P G P G G GG G G G +G P A Sbjct: 340 LLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGEPKGGPGTGSGGGGAGTGGGAGGPGA 399 Query: 64 SPPPQGPLPGPPGALHRW----ALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGA 119 S P G GP G W + A A A+ P P G Sbjct: 400 SHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAATVYPTFPMFWPAAGSLPVPSY 459 Query: 120 AAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPER 168 AA A V V A +G G + A G G+ ER Sbjct: 460 PAAQSQAKAVAAAVAAAAAAAAAAAGSGAPEPLDGAEPAKESGLGAEER 508 Score = 32.7 bits (73), Expect = 0.91 Identities = 30/112 (26%), Positives = 35/112 (31%), Gaps = 26/112 (23%) Query: 12 PDADPANEPPPPGPMPPAPRRGGGVG-------VGGGGTGVGGGDRDRDSGVVGARPRAS 64 PD + A E P AP GGG +G G D G R R Sbjct: 625 PDDEDAQEETEPS----APSAGGGPDGEQPTGPPSATSSGADGPANSPDGGSPRPRRRLG 680 Query: 65 PPPQG---------------PLPGPPGALHRWALAVPPGAVAGPRPQQASPP 101 PPP G P PP + L P G + GP P + P Sbjct: 681 PPPAGRPAFGDLAAEDLVRRPERSPPSGGGGYELREPCGPLGGPAPAKVFAP 732 >gi|126352608 elastin isoform e precursor [Homo sapiens] Length = 705 Score = 58.9 bits (141), Expect = 1e-08 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74 P P G +P P G GV GVGG +G+ G P P P PL P Sbjct: 156 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 208 Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122 P + PG VAG + G P G G GP A AAA Sbjct: 209 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 262 Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177 G GAAGV+ GVGGA GV G PG PG+G + G G+P A Sbjct: 263 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 312 Query: 178 EDEYEAAAARI 188 +Y AAA + Sbjct: 313 AAKYGAAAGLV 323 Score = 55.8 bits (133), Expect = 1e-07 Identities = 54/149 (36%), Positives = 63/149 (42%), Gaps = 25/149 (16%) Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90 G GVGVG G GVG +GV G A P G +PG A ++ AVP G + Sbjct: 533 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 584 Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148 G GG G PGG G G A AAAA A G+ GA G+GG G Sbjct: 585 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 635 Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGYNS 177 PGVG +GG P A Y + Sbjct: 636 ----LGVPGVGGLGGIPPAAAAKAAKYGA 660 Score = 48.1 bits (113), Expect = 2e-05 Identities = 54/161 (33%), Positives = 60/161 (37%), Gaps = 33/161 (20%) Query: 21 PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70 P P+ P P G G+G G G V GG D + A+ A G Sbjct: 58 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG---LGG 114 Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA-G 128 +PG G L V GAV P G G PG PG L GA GVG G Sbjct: 115 VPGVGG------LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 168 Query: 129 VVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 V G G A GVGG +G PGVG GG P Sbjct: 169 VPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 200 Score = 46.6 bits (109), Expect = 6e-05 Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%) Query: 29 APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88 A + G G+ GG G G G GV GA P +P PGA +P Sbjct: 313 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 362 Query: 89 AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144 AV G +A+ G PG +G GVGA G VGVGG GV G Sbjct: 363 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 422 Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173 G PGVG V G SPE + A Sbjct: 423 VGG-------VPGVGGVPGVGISPEAQAAAA 446 Score = 43.1 bits (100), Expect = 7e-04 Identities = 53/148 (35%), Positives = 57/148 (38%), Gaps = 27/148 (18%) Query: 20 PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGA 77 P PG +P A G GGV G G G GG G +G P PL PG Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG------GALG-------PGGKPLKPVPGG 69 Query: 78 LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGG 135 L L GA G P P G PGG A AA AG G G V GVGG Sbjct: 70 LAGAGL----GAGLGAFPAVTFP----GALVPGGVADAAAAYKAAKAGAGLGG-VPGVGG 120 Query: 136 -AVGVGGCCSGPGHSKRRRQAPGVGAVG 162 V G PG + + PGVG G Sbjct: 121 LGVSAGAVVPQPGAGVKPGKVPGVGLPG 148 Score = 42.7 bits (99), Expect = 9e-04 Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%) Query: 35 GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91 GVG GG G GVGG GV G P G +PG + A A A Sbjct: 398 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 452 Query: 92 GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147 G P P G G G PG L A GVG A GV GVG A G+G G + Sbjct: 453 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 509 Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174 S + R A G+GA VG G P VGAG Sbjct: 510 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 548 Score = 41.6 bits (96), Expect = 0.002 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%) Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91 G G G TG G G + + A + G LPG GA VP PGA+ Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 290 Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128 G P A+ PGGPG GPG G GV AG Sbjct: 291 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 350 Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174 + V G+ GA V G S +K +A GA VG G VGAG Sbjct: 351 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 402 Score = 37.7 bits (86), Expect = 0.028 Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%) Query: 33 GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78 G GVGVGG G GVGG S A A G +PG PG Sbjct: 406 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 465 Query: 79 HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110 + V PG P P P G GPGG Sbjct: 466 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 525 Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156 G PG +G G+G V G+G GV G + PG + A Sbjct: 526 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 585 Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187 G+GA+GG VGAG + AAA+ Sbjct: 586 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 616 >gi|126352446 elastin isoform d precursor [Homo sapiens] Length = 711 Score = 58.9 bits (141), Expect = 1e-08 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74 P P G +P P G GV GVGG +G+ G P P P PL P Sbjct: 161 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 213 Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122 P + PG VAG + G P G G GP A AAA Sbjct: 214 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 267 Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177 G GAAGV+ GVGGA GV G PG PG+G + G G+P A Sbjct: 268 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 317 Query: 178 EDEYEAAAARI 188 +Y AAA + Sbjct: 318 AAKYGAAAGLV 328 Score = 55.5 bits (132), Expect = 1e-07 Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 18/147 (12%) Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90 G G G+ G G GVG +GV G A P G +PG A ++ AV PG + Sbjct: 550 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV-PGVL 608 Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148 G GG G PGG G G A AAAA A G+ GA G+GG G Sbjct: 609 GG-------LGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVG--- 658 Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175 PGVG +GG P A Y Sbjct: 659 ---GLGVPGVGGLGGIPPAAAAKAAKY 682 Score = 48.9 bits (115), Expect = 1e-05 Identities = 55/163 (33%), Positives = 60/163 (36%), Gaps = 32/163 (19%) Query: 21 PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70 P P+ P P G G+G G G V GG D + A+ A Sbjct: 58 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG------ 111 Query: 71 LPGPPGALHRWALAVP--PGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA 127 L G PG A P PGAV P G G PG PG L GA GVG Sbjct: 112 LGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171 Query: 128 -GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 GV G G A GVGG +G PGVG GG P Sbjct: 172 PGVPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 205 Score = 44.7 bits (104), Expect = 2e-04 Identities = 46/142 (32%), Positives = 55/142 (38%), Gaps = 18/142 (12%) Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93 GG G G G GV G +GV G + P P G PGA ++ A A Sbjct: 330 GGPGFGPGVVGVPG------AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAA 383 Query: 94 RPQQASPPPCGGPGG-------PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146 + + P G GG GG PG G G+ V GVGG GVGG G Sbjct: 384 KAAKYGARPGVGVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGG-VPGV 440 Query: 147 GHSKRRRQAPGVGAV--GGGSP 166 G S + A A G G+P Sbjct: 441 GISPEAQAAAAAKAAKYGVGTP 462 Score = 41.6 bits (96), Expect = 0.002 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%) Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91 G G G TG G G + + A + G LPG GA VP PGA+ Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 295 Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128 G P A+ PGGPG GPG G GV AG Sbjct: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 355 Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174 + V G+ GA V G S +K +A GA VG G VGAG Sbjct: 356 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407 Score = 37.4 bits (85), Expect = 0.037 Identities = 59/168 (35%), Positives = 63/168 (37%), Gaps = 32/168 (19%) Query: 33 GGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRASPPPQGPLP----GPPGALHRWAL 83 G GVGVGG G GVGG VG P A G P A A Sbjct: 411 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAA--AK 468 Query: 84 AVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG 140 A A G P P G G G PG L A GVG A GV GVG A G+G Sbjct: 469 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIG 525 Query: 141 -GCCSGPGHSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174 G + S + R A G+GA VG G P VGAG Sbjct: 526 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 572 Score = 37.4 bits (85), Expect = 0.037 Identities = 52/171 (30%), Positives = 63/171 (36%), Gaps = 29/171 (16%) Query: 35 GVGVGGGGTGVGGGDRDRDSGVVGARPRAS-PPPQGPLPG---PPGALHRWALAVPPGAV 90 GVGV G GV G VG P P G PG PG A + PG V Sbjct: 481 GVGVAPG-VGVAPG--------VGVAPGVGLAPGVGVAPGVGVAPGV--GVAPGIGPGGV 529 Query: 91 AGPRPQQA---SPPPCGGPGGPGGG-PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146 A A + G G G PG +G G+G V G+G GV G + P Sbjct: 530 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVP 589 Query: 147 GHSKRRRQAP----------GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187 G + A G+GA+GG VGAG + AAA+ Sbjct: 590 GALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 640 Score = 33.5 bits (75), Expect = 0.53 Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%) Query: 87 PGAVAGPRPQQASPPPCG------GPGGPGGGPGDAL--GAAAAGVGA---AGVVVGVGG 135 PGA+ G P P G G GPGG P + G A AG+GA A V G Sbjct: 30 PGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPG 89 Query: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163 A+ GG K + G+G V G Sbjct: 90 ALVPGGVADAAAAYKAAKAGAGLGGVPG 117 Score = 30.8 bits (68), Expect = 3.5 Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 11/61 (18%) Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGV--GGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163 P PGG PG G GV G +G GGA+G GG K + PG G G Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG--------KPLKPVPG-GLAGA 73 Query: 164 G 164 G Sbjct: 74 G 74 >gi|126352322 elastin isoform c precursor [Homo sapiens] Length = 692 Score = 58.9 bits (141), Expect = 1e-08 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74 P P G +P P G GV GVGG +G+ G P P P PL P Sbjct: 161 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 213 Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122 P + PG VAG + G P G G GP A AAA Sbjct: 214 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 267 Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177 G GAAGV+ GVGGA GV G PG PG+G + G G+P A Sbjct: 268 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 317 Query: 178 EDEYEAAAARI 188 +Y AAA + Sbjct: 318 AAKYGAAAGLV 328 Score = 55.5 bits (132), Expect = 1e-07 Identities = 54/147 (36%), Positives = 62/147 (42%), Gaps = 25/147 (17%) Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90 G GVGVG G GVG +GV G A P G +PG A ++ AVP G + Sbjct: 538 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 589 Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148 G GG G PGG G G A AAAA A G+ GA G+GG G Sbjct: 590 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 640 Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175 PGVG +GG P A Y Sbjct: 641 ----LGVPGVGGLGGIPPAAAAKAAKY 663 Score = 48.9 bits (115), Expect = 1e-05 Identities = 55/163 (33%), Positives = 60/163 (36%), Gaps = 32/163 (19%) Query: 21 PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70 P P+ P P G G+G G G V GG D + A+ A Sbjct: 58 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG------ 111 Query: 71 LPGPPGALHRWALAVP--PGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA 127 L G PG A P PGAV P G G PG PG L GA GVG Sbjct: 112 LGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171 Query: 128 -GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 GV G G A GVGG +G PGVG GG P Sbjct: 172 PGVPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 205 Score = 46.6 bits (109), Expect = 6e-05 Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%) Query: 29 APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88 A + G G+ GG G G G GV GA P +P PGA +P Sbjct: 318 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 367 Query: 89 AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144 AV G +A+ G PG +G GVGA G VGVGG GV G Sbjct: 368 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 427 Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173 G PGVG V G SPE + A Sbjct: 428 VGG-------VPGVGGVPGVGISPEAQAAAA 451 Score = 42.7 bits (99), Expect = 9e-04 Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%) Query: 35 GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91 GVG GG G GVGG GV G P G +PG + A A A Sbjct: 403 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457 Query: 92 GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147 G P P G G G PG L A GVG A GV GVG A G+G G + Sbjct: 458 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 514 Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174 S + R A G+GA VG G P VGAG Sbjct: 515 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 553 Score = 41.6 bits (96), Expect = 0.002 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%) Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91 G G G TG G G + + A + G LPG GA VP PGA+ Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 295 Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128 G P A+ PGGPG GPG G GV AG Sbjct: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 355 Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174 + V G+ GA V G S +K +A GA VG G VGAG Sbjct: 356 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407 Score = 37.7 bits (86), Expect = 0.028 Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%) Query: 33 GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78 G GVGVGG G GVGG S A A G +PG PG Sbjct: 411 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 470 Query: 79 HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110 + V PG P P P G GPGG Sbjct: 471 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 530 Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156 G PG +G G+G V G+G GV G + PG + A Sbjct: 531 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 590 Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187 G+GA+GG VGAG + AAA+ Sbjct: 591 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 621 Score = 33.5 bits (75), Expect = 0.53 Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%) Query: 87 PGAVAGPRPQQASPPPCG------GPGGPGGGPGDAL--GAAAAGVGA---AGVVVGVGG 135 PGA+ G P P G G GPGG P + G A AG+GA A V G Sbjct: 30 PGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPG 89 Query: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163 A+ GG K + G+G V G Sbjct: 90 ALVPGGVADAAAAYKAAKAGAGLGGVPG 117 Score = 30.8 bits (68), Expect = 3.5 Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 11/61 (18%) Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGV--GGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163 P PGG PG G GV G +G GGA+G GG K + PG G G Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG--------KPLKPVPG-GLAGA 73 Query: 164 G 164 G Sbjct: 74 G 74 >gi|126352700 elastin isoform b precursor [Homo sapiens] Length = 677 Score = 58.9 bits (141), Expect = 1e-08 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74 P P G +P P G GV GVGG +G+ G P P P PL P Sbjct: 146 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 198 Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122 P + PG VAG + G P G G GP A AAA Sbjct: 199 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 252 Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177 G GAAGV+ GVGGA GV G PG PG+G + G G+P A Sbjct: 253 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 302 Query: 178 EDEYEAAAARI 188 +Y AAA + Sbjct: 303 AAKYGAAAGLV 313 Score = 55.5 bits (132), Expect = 1e-07 Identities = 54/147 (36%), Positives = 62/147 (42%), Gaps = 25/147 (17%) Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90 G GVGVG G GVG +GV G A P G +PG A ++ AVP G + Sbjct: 523 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 574 Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148 G GG G PGG G G A AAAA A G+ GA G+GG G Sbjct: 575 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 625 Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175 PGVG +GG P A Y Sbjct: 626 ----LGVPGVGGLGGIPPAAAAKAAKY 648 Score = 48.5 bits (114), Expect = 2e-05 Identities = 59/186 (31%), Positives = 66/186 (35%), Gaps = 42/186 (22%) Query: 5 PKKKPPPPDADPANEP---------PPPGPMPPAPRRGGGVGVGGG----------GTGV 45 P + P A P P P P+ P P G G+G G G V Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82 Query: 46 GGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGG 105 GG D + A+ A G +PG G L V GAV P G Sbjct: 83 PGGVADAAAAYKAAKAGAG---LGGVPGVGG------LGVSAGAVVPQPGAGVKPGKVPG 133 Query: 106 PGGPGGGPGDAL-GAAAAGVGAA-GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGA 160 G PG PG L GA GVG GV G G A GVGG +G PGVG Sbjct: 134 VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAG---------IPGVGP 184 Query: 161 VGGGSP 166 GG P Sbjct: 185 FGGPQP 190 Score = 46.6 bits (109), Expect = 6e-05 Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%) Query: 29 APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88 A + G G+ GG G G G GV GA P +P PGA +P Sbjct: 303 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 352 Query: 89 AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144 AV G +A+ G PG +G GVGA G VGVGG GV G Sbjct: 353 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 412 Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173 G PGVG V G SPE + A Sbjct: 413 VGG-------VPGVGGVPGVGISPEAQAAAA 436 Score = 42.7 bits (99), Expect = 9e-04 Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%) Query: 35 GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91 GVG GG G GVGG GV G P G +PG + A A A Sbjct: 388 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 442 Query: 92 GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147 G P P G G G PG L A GVG A GV GVG A G+G G + Sbjct: 443 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 499 Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174 S + R A G+GA VG G P VGAG Sbjct: 500 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 538 Score = 41.6 bits (96), Expect = 0.002 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%) Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91 G G G TG G G + + A + G LPG GA VP PGA+ Sbjct: 227 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 280 Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128 G P A+ PGGPG GPG G GV AG Sbjct: 281 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 340 Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174 + V G+ GA V G S +K +A GA VG G VGAG Sbjct: 341 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 392 Score = 37.7 bits (86), Expect = 0.028 Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%) Query: 33 GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78 G GVGVGG G GVGG S A A G +PG PG Sbjct: 396 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 455 Query: 79 HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110 + V PG P P P G GPGG Sbjct: 456 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 515 Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156 G PG +G G+G V G+G GV G + PG + A Sbjct: 516 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 575 Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187 G+GA+GG VGAG + AAA+ Sbjct: 576 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 606 >gi|126352440 elastin isoform a precursor [Homo sapiens] Length = 724 Score = 58.9 bits (141), Expect = 1e-08 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74 P P G +P P G GV GVGG +G+ G P P P PL P Sbjct: 156 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 208 Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122 P + PG VAG + G P G G GP A AAA Sbjct: 209 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 262 Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177 G GAAGV+ GVGGA GV G PG PG+G + G G+P A Sbjct: 263 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 312 Query: 178 EDEYEAAAARI 188 +Y AAA + Sbjct: 313 AAKYGAAAGLV 323 Score = 55.8 bits (133), Expect = 1e-07 Identities = 54/149 (36%), Positives = 63/149 (42%), Gaps = 25/149 (16%) Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90 G GVGVG G GVG +GV G A P G +PG A ++ AVP G + Sbjct: 552 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 603 Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148 G GG G PGG G G A AAAA A G+ GA G+GG G Sbjct: 604 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 654 Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGYNS 177 PGVG +GG P A Y + Sbjct: 655 ----LGVPGVGGLGGIPPAAAAKAAKYGA 679 Score = 48.1 bits (113), Expect = 2e-05 Identities = 54/161 (33%), Positives = 60/161 (37%), Gaps = 33/161 (20%) Query: 21 PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70 P P+ P P G G+G G G V GG D + A+ A G Sbjct: 58 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG---LGG 114 Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA-G 128 +PG G L V GAV P G G PG PG L GA GVG G Sbjct: 115 VPGVGG------LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 168 Query: 129 VVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 V G G A GVGG +G PGVG GG P Sbjct: 169 VPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 200 Score = 44.7 bits (104), Expect = 2e-04 Identities = 46/142 (32%), Positives = 55/142 (38%), Gaps = 18/142 (12%) Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93 GG G G G GV G +GV G + P P G PGA ++ A A Sbjct: 325 GGPGFGPGVVGVPG------AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAA 378 Query: 94 RPQQASPPPCGGPGG-------PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146 + + P G GG GG PG G G+ V GVGG GVGG G Sbjct: 379 KAAKYGARPGVGVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGG-VPGV 435 Query: 147 GHSKRRRQAPGVGAV--GGGSP 166 G S + A A G G+P Sbjct: 436 GISPEAQAAAAAKAAKYGVGTP 457 Score = 43.1 bits (100), Expect = 7e-04 Identities = 53/148 (35%), Positives = 57/148 (38%), Gaps = 27/148 (18%) Query: 20 PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGA 77 P PG +P A G GGV G G G GG G +G P PL PG Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG------GALG-------PGGKPLKPVPGG 69 Query: 78 LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGG 135 L L GA G P P G PGG A AA AG G G V GVGG Sbjct: 70 LAGAGL----GAGLGAFPAVTFP----GALVPGGVADAAAAYKAAKAGAGLGG-VPGVGG 120 Query: 136 -AVGVGGCCSGPGHSKRRRQAPGVGAVG 162 V G PG + + PGVG G Sbjct: 121 LGVSAGAVVPQPGAGVKPGKVPGVGLPG 148 Score = 41.6 bits (96), Expect = 0.002 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%) Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91 G G G TG G G + + A + G LPG GA VP PGA+ Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 290 Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128 G P A+ PGGPG GPG G GV AG Sbjct: 291 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 350 Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174 + V G+ GA V G S +K +A GA VG G VGAG Sbjct: 351 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 402 Score = 37.4 bits (85), Expect = 0.037 Identities = 59/168 (35%), Positives = 63/168 (37%), Gaps = 32/168 (19%) Query: 33 GGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRASPPPQGPLP----GPPGALHRWAL 83 G GVGVGG G GVGG VG P A G P A A Sbjct: 406 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAA--AK 463 Query: 84 AVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG 140 A A G P P G G G PG L A GVG A GV GVG A G+G Sbjct: 464 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIG 520 Query: 141 -GCCSGPGHSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174 G + S + R A G+GA VG G P VGAG Sbjct: 521 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 567 Score = 37.4 bits (85), Expect = 0.037 Identities = 52/171 (30%), Positives = 63/171 (36%), Gaps = 29/171 (16%) Query: 35 GVGVGGGGTGVGGGDRDRDSGVVGARPRAS-PPPQGPLPG---PPGALHRWALAVPPGAV 90 GVGV G GV G VG P P G PG PG A + PG V Sbjct: 476 GVGVAPG-VGVAPG--------VGVAPGVGLAPGVGVAPGVGVAPGV--GVAPGIGPGGV 524 Query: 91 AGPRPQQA---SPPPCGGPGGPGGG-PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146 A A + G G G PG +G G+G V G+G GV G + P Sbjct: 525 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVP 584 Query: 147 GHSKRRRQAP----------GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187 G + A G+GA+GG VGAG + AAA+ Sbjct: 585 GALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 635 >gi|59806361 hypothetical protein LOC387104 [Homo sapiens] Length = 947 Score = 58.9 bits (141), Expect = 1e-08 Identities = 54/183 (29%), Positives = 68/183 (37%), Gaps = 28/183 (15%) Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 + L ++P PP+ P P + P G G G GG G G GGG +R+ G Sbjct: 132 LAALGGRRPGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGEREGGA---- 187 Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120 PPP P G + A G G + ASP P G G G+ Sbjct: 188 --PQPPP------PRGWRGKGVRAQQRGGSGG---EGASPSPSSSSAGKTPG----TGSR 232 Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSG---PGHSKRRRQAPGVGAV------GGGSPEREEV 171 +G G AG G GG+ GC H K+ R A A GGGS R Sbjct: 233 NSGSGVAGGGSGGGGSYWKEGCLQSELIQFHLKKERAAAAAAAAQMHAKNGGGSSSRSSP 292 Query: 172 GAG 174 +G Sbjct: 293 VSG 295 >gi|149192871 OTU domain containing 3 [Homo sapiens] Length = 398 Score = 58.5 bits (140), Expect = 2e-08 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 25/174 (14%) Query: 168 REEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFR 227 R E G G E+E+ + A +++A+ G ++++ DG CLFR Sbjct: 40 RPESGGGGGCEEEFVSFANQLQAL--------------------GLKLREVPGDGNCLFR 79 Query: 228 AVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEM 285 A+ DQ+ G H R+ +DY++K + F +V +D F ++ K + + Sbjct: 80 ALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAI 139 Query: 286 QAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSV--VNPN 337 A A + V ++Q + P+ G ++ + ++Y HY+SV +N N Sbjct: 140 VAFARNHQLNVVIHQLNA-PLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDN 192 >gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] Length = 1263 Score = 58.2 bits (139), Expect = 2e-08 Identities = 50/147 (34%), Positives = 56/147 (38%), Gaps = 37/147 (25%) Query: 2 TILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVG-----GGDR- 50 TI+P PPP D PPPP P PP P GGV + GGT + GD Sbjct: 585 TIIP---PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDAT 641 Query: 51 -----DRDSGVVGARPRASP-----PPQGPLPG-----PPGALHRWALAVPPGAVAGPRP 95 GV P + P PP PLPG PP + +PP P Sbjct: 642 IPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 701 Query: 96 QQASPPPCGGPGGPG--------GGPG 114 PPP PGGPG GGPG Sbjct: 702 AGMPPPPPPLPGGPGIPPPPPFPGGPG 728 Score = 33.1 bits (74), Expect = 0.70 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG 111 RA PP PLPG G + + PP P PPP P PGG Sbjct: 570 RAPVPPAPPLPGDSGTI----IPPPPAPGDSTTPPPPPPPPPPPPPLPGG 615 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 9 PPPPDADPANEPPPPGP-MPPAPRRGGGV 36 PPP P PPPPG MPP P G GV Sbjct: 720 PPPFPGGPGIPPPPPGMGMPPPPPFGFGV 748 >gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] Length = 1272 Score = 58.2 bits (139), Expect = 2e-08 Identities = 50/147 (34%), Positives = 56/147 (38%), Gaps = 37/147 (25%) Query: 2 TILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVG-----GGDR- 50 TI+P PPP D PPPP P PP P GGV + GGT + GD Sbjct: 594 TIIP---PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDAT 650 Query: 51 -----DRDSGVVGARPRASP-----PPQGPLPG-----PPGALHRWALAVPPGAVAGPRP 95 GV P + P PP PLPG PP + +PP P Sbjct: 651 IPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 710 Query: 96 QQASPPPCGGPGGPG--------GGPG 114 PPP PGGPG GGPG Sbjct: 711 AGMPPPPPPLPGGPGIPPPPPFPGGPG 737 Score = 33.1 bits (74), Expect = 0.70 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG 111 RA PP PLPG G + + PP P PPP P PGG Sbjct: 579 RAPVPPAPPLPGDSGTI----IPPPPAPGDSTTPPPPPPPPPPPPPLPGG 624 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 9 PPPPDADPANEPPPPGP-MPPAPRRGGGV 36 PPP P PPPPG MPP P G GV Sbjct: 729 PPPFPGGPGIPPPPPGMGMPPPPPFGFGV 757 >gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] Length = 1838 Score = 57.8 bits (138), Expect = 3e-08 Identities = 64/217 (29%), Positives = 71/217 (32%), Gaps = 60/217 (27%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGA--- 59 P + PP A P GP PA R G G VG+ G VG D D G +G Sbjct: 1107 PGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQ 1166 Query: 60 ------RPRASPP----PQGPL--------------------------------PGPPGA 77 + PP PQGP+ PGPPG Sbjct: 1167 KGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGP 1226 Query: 78 LHRWALAVPPGAVAGPRP-QQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVVVGVGG 135 + L PPG Q PP GP GP G PG D G+G G V G Sbjct: 1227 VGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAV----G 1282 Query: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172 G G PG PG G G ER E G Sbjct: 1283 EKGEPGEAGEPG-------LPGEGGPPGPKGERGEKG 1312 Score = 50.8 bits (120), Expect = 3e-06 Identities = 54/175 (30%), Positives = 62/175 (35%), Gaps = 17/175 (9%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 P +P P AD P PPG M P R GG G G + + ++ A Sbjct: 500 PPGRPGLPGADGL--PGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLAL 557 Query: 65 PPPQGPL-----PGPPGALHRWALAVPPGAVA--GPRPQQASPPPCGGPGGPGGGPGDAL 117 P GP+ PGP G L PG V GPR Q GP GP G PG Sbjct: 558 RGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQ-------GPPGPAGKPGRRG 610 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172 A + G G G G G PG K R PG G + E G Sbjct: 611 RAGSDGARGMPGQTGPKGDRGFDGLAGLPG-EKGHRGDPGPSGPPGPPGDDGERG 664 Score = 48.9 bits (115), Expect = 1e-05 Identities = 56/173 (32%), Positives = 69/173 (39%), Gaps = 23/173 (13%) Query: 4 LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63 LP +K D P+ P PPG RG VG G G R G++G P+ Sbjct: 638 LPGEKGHRGDPGPSGPPGPPG---DDGERGDDGEVGPRGLPGEPGPR----GLLG--PKG 688 Query: 64 SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-GGPGDALGAAAA 122 P P PGPPG P G V GP+ + P G PG G GP A+G Sbjct: 689 PPGP----PGPPGVTGMDGQPGPKGNV-GPQGEPGPPGQQGNPGAQGLPGPQGAIGPP-- 741 Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175 G G +G G G+ G PGH ++ P G GG P + GY Sbjct: 742 --GEKG-PLGKPGLPGMPGADGPPGHP--GKEGP-PGEKGGQGPPGPQGPIGY 788 Score = 48.5 bits (114), Expect = 2e-05 Identities = 52/178 (29%), Positives = 61/178 (34%), Gaps = 12/178 (6%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 P +K D P PPGP P+ G G G G+G + G G Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPSGAPGAD-GPQGPPGGIGNPGAVGEKGEPGEAGEPG 1294 Query: 65 PPPQGPLPGPPGALHRWA------LAVPPGAVAGPRPQ--QASPPPCGGPGGPG--GGPG 114 P +G PGP G A PPG P + SP P G PG PG G PG Sbjct: 1295 LPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPG 1354 Query: 115 DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172 A G G G+ G G GP +R PG G E+ G Sbjct: 1355 PAGQDGPPGDKGDDGEPGQTGSPGPTG-EPGPSGPPGKRGPPGPAGPEGRQGEKGAKG 1411 Score = 47.4 bits (111), Expect = 4e-05 Identities = 54/197 (27%), Positives = 62/197 (31%), Gaps = 32/197 (16%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRA 63 P K PP D P P P G P P G G G G D + G G+ P Sbjct: 1323 PGPKGPPGDDGPKGSPGPVG-FPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTG 1381 Query: 64 SPPPQGPL-----PGPPGALHRWA---------LAVPPGAVA--GPRPQQASPPPCG--- 104 P P GP PGP G R L PPG GP+ P P G Sbjct: 1382 EPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRG 1441 Query: 105 -----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRR 153 G GP G PG G+ G G G+ G PG + Sbjct: 1442 IPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKG 1501 Query: 154 QAPGVGAVGGGSPEREE 170 G G P+ E+ Sbjct: 1502 DRGLPGPQGSSGPKGEQ 1518 Score = 45.8 bits (107), Expect = 1e-04 Identities = 41/118 (34%), Positives = 50/118 (42%), Gaps = 17/118 (14%) Query: 12 PDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPPPQG 69 P DP + P GP PA + G+GG G G G + G++ P P P+G Sbjct: 419 PYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGP---PGPEG 475 Query: 70 P--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG---------GGPGDA 116 P LPGPPG + PG GP + P G PG PG GG GDA Sbjct: 476 PAGLPGPPGTMGPTGQVGDPGE-RGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDA 532 Score = 45.8 bits (107), Expect = 1e-04 Identities = 53/183 (28%), Positives = 62/183 (33%), Gaps = 10/183 (5%) Query: 4 LPKKKPPPPDADPANEPPPPGP-----MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG 58 LP + P P P PPGP M P G VG G G G+ G Sbjct: 674 LPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPG 733 Query: 59 ARPRASPPPQ-GPL--PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGD 115 + PP + GPL PG PG PG P + PP GP GP G PG Sbjct: 734 PQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP--GPQGPIGYPGP 791 Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175 A G+ G G G G G R + G G PE + G Sbjct: 792 RGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGP 851 Query: 176 NSE 178 N + Sbjct: 852 NGD 854 Score = 44.3 bits (103), Expect = 3e-04 Identities = 47/148 (31%), Positives = 53/148 (35%), Gaps = 17/148 (11%) Query: 10 PPPDADPANEPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVG-ARPRA 63 P + P E PGP P +G G G G G +D G+ G R Sbjct: 1004 PTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRG 1063 Query: 64 SPPPQGPL--------PGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--GPGGPGGGP 113 P P G L PGPPG P GA AGP P P G GP G G P Sbjct: 1064 LPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGA-AGPIGIPGRPGPQGPPGPAGEKGAP 1122 Query: 114 GDALGAAAAGVGAAGVVVGVGGAVGVGG 141 G+ AG VG+ G G G Sbjct: 1123 GEKGPQGPAGRDGLQGPVGLPGPAGPVG 1150 Score = 43.9 bits (102), Expect = 4e-04 Identities = 55/178 (30%), Positives = 59/178 (33%), Gaps = 23/178 (12%) Query: 7 KKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 +K P +A P GP P RG G G G G D G P+ S Sbjct: 1283 EKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDG-----PKGS 1337 Query: 65 PPPQG--PLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG-----------GPGGP 109 P P G PGPPG PPG G Q SP P G GP GP Sbjct: 1338 PGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGP 1397 Query: 110 GGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166 G G A G G G +G G PG R VG G GSP Sbjct: 1398 AGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSP 1455 Score = 41.6 bits (96), Expect = 0.002 Identities = 48/169 (28%), Positives = 53/169 (31%), Gaps = 35/169 (20%) Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69 PP PA P PPG M P G VG D G G R P Sbjct: 470 PPGPEGPAGLPGPPGTMGPT----GQVG---------------DPGERGPPGRPGLPGAD 510 Query: 70 PLPGPPGALHRWALAVPPGAVAGPRPQQASPPPC----------------GGPGGPGGGP 113 LPGPPG + G AG + S GP G G P Sbjct: 511 GLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRP 570 Query: 114 GDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162 G + G+ VG G GV G G RR +A GA G Sbjct: 571 GPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARG 619 Score = 41.6 bits (96), Expect = 0.002 Identities = 48/152 (31%), Positives = 53/152 (34%), Gaps = 27/152 (17%) Query: 6 KKKPPPPDA-----DPANEPPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGV 56 K PP P P E P G P PP P G+ G G G D G Sbjct: 989 KTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKG-----DPGP 1043 Query: 57 VGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDA 116 G + PP PG G PG V + PP GP GP G PG+ Sbjct: 1044 AGLPGKDGPPGLRGFPGDRGL---------PGPVGALGLKGNEGPP--GPPGPAGSPGER 1092 Query: 117 LGAAAAG-VGAAGVVVGVGGAVGVGGCCSGPG 147 A AAG +G G G G G G PG Sbjct: 1093 GPAGAAGPIGIPG-RPGPQGPPGPAGEKGAPG 1123 Score = 41.2 bits (95), Expect = 0.003 Identities = 55/174 (31%), Positives = 64/174 (36%), Gaps = 26/174 (14%) Query: 11 PPDADPANEPPPPGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRD-------SGVVGA 59 P P + P GP RG G G G GG G G +R +G G Sbjct: 903 PGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGP 962 Query: 60 RPRASPPPQGPLPGPPGALHRWAL---AVPPG--AVAGPRPQQASPPPCG--GPGGPGGG 112 + PP + LPG PG PPG V GP+ P G G GP G Sbjct: 963 KGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGP 1022 Query: 113 PGD-ALGAAAAGVGAAG--VVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVG 162 PG+ L A G G G+ G G G PG R PG VGA+G Sbjct: 1023 PGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGD----RGLPGPVGALG 1072 Score = 39.7 bits (91), Expect = 0.007 Identities = 36/120 (30%), Positives = 44/120 (36%), Gaps = 23/120 (19%) Query: 10 PPPDADPANEPPP-----PGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDR--------- 52 P PD P PP G P +G G +G +G G GDR Sbjct: 1455 PGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGP 1514 Query: 53 --DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG 110 + G+ G PP LPGPPG + P GP+ + P P G PG PG Sbjct: 1515 KGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGP----TGPKGEAGHPGPPGPPGPPG 1570 Score = 37.0 bits (84), Expect = 0.048 Identities = 37/128 (28%), Positives = 44/128 (34%), Gaps = 19/128 (14%) Query: 22 PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRW 81 PPGPM P G G+ G G G++G LPGP G+ Sbjct: 1460 PPGPMGPP----GLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGS---- 1511 Query: 82 ALAVPPGAVAGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGV 139 +GP+ +Q P G GP GP G PG A G G G G Sbjct: 1512 ---------SGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGP 1562 Query: 140 GGCCSGPG 147 G PG Sbjct: 1563 PGPPGPPG 1570 Score = 37.0 bits (84), Expect = 0.048 Identities = 31/85 (36%), Positives = 33/85 (38%), Gaps = 30/85 (35%) Query: 16 PANEPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP 74 P P PPG P PP P+ G SG G + A P GP PGP Sbjct: 1526 PIGPPGPPGLPGPPGPKGAKG-----------------SSGPTGPKGEAGHP--GP-PGP 1565 Query: 75 PGALHRWALAVPPGAVAGPRPQQAS 99 PG PPG V P P QAS Sbjct: 1566 PG---------PPGEVIQPLPIQAS 1581 Score = 35.4 bits (80), Expect = 0.14 Identities = 49/190 (25%), Positives = 66/190 (34%), Gaps = 21/190 (11%) Query: 5 PKKKPPPP--DADPANE--PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVG 58 P+ +P PP +P + P P G + P +G G G+ G G G G Sbjct: 713 PQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPG 772 Query: 59 ARPRASPP-PQGPL--PGPPGALHRWALAVPPGAVAGPRPQQASPPPCG----------- 104 + PP PQGP+ PGP G + G G + + P G Sbjct: 773 EKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGT-KGEKGEDGFPGFKGDMGIKGDRGEI 831 Query: 105 GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGG 164 GP GP G G G +G G G G PG+ R+ +G G Sbjct: 832 GPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFP 891 Query: 165 SPEREEVGAG 174 E+ G G Sbjct: 892 GANGEKGGRG 901 >gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] Length = 703 Score = 57.8 bits (138), Expect = 3e-08 Identities = 58/185 (31%), Positives = 67/185 (36%), Gaps = 23/185 (12%) Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGG-GVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 K +P PP PP P P P G G+ G G G R +G G + Sbjct: 76 KGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVG 135 Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQ----------QASPPPCG-----GPGGP 109 PP Q L G PG L PPG P P Q P P G GP G Sbjct: 136 PPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGE 195 Query: 110 GGGPGDALGAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167 G PGD GVG G+ G GGA G G G K PG+ + G + Sbjct: 196 PGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK-----PGLDGLPGAPGD 250 Query: 168 REEVG 172 + E G Sbjct: 251 KGESG 255 Score = 42.7 bits (99), Expect = 9e-04 Identities = 54/192 (28%), Positives = 64/192 (33%), Gaps = 16/192 (8%) Query: 4 LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63 LP PP P EP G R GG GV G G G+ G P Sbjct: 413 LPGAHGPPGPTGPKGEPGFTG-------RPGGPGVAGALGQKGDLGLPGQPGLRG--PSG 463 Query: 64 SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAG 123 P QGP GP G L PG P +A P GP GP G PG + G Sbjct: 464 IPGLQGPA-GPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPG------SPG 516 Query: 124 VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEA 183 + G G G G G + GV G + + G G S A Sbjct: 517 ITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPA 576 Query: 184 AAARIEAMDPAT 195 A + + PA+ Sbjct: 577 FTAVLTSPFPAS 588 Score = 42.4 bits (98), Expect = 0.001 Identities = 58/195 (29%), Positives = 73/195 (37%), Gaps = 54/195 (27%) Query: 10 PPPDADPANEP-------PP-------------PGPMPPAPRRG--------GGVG-VGG 40 PP P EP PP PGP P+ +G G +G G Sbjct: 256 PPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGY 315 Query: 41 GGTGVGGGDRDRD----SGVVGARPR----ASPPPQGP--LPGPPGALHRWALAVPPGAV 90 G G+ G DR G++G R P QGP L GPPG PG+ Sbjct: 316 GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGL---------PGS- 365 Query: 91 AGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148 AG ++ P P G GPGGP G PG +G+ GV G G+ G PG Sbjct: 366 AGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGK---PGVPGERGLPGAHGPPGP 422 Query: 149 SKRRRQAPGVGAVGG 163 + + + G GG Sbjct: 423 TGPKGEPGFTGRPGG 437 Score = 42.4 bits (98), Expect = 0.001 Identities = 56/184 (30%), Positives = 71/184 (38%), Gaps = 28/184 (15%) Query: 11 PPDADPANEPPP---PGPMPPAPRRG--------GGVG-VGGGGTGVGGGDRDRDS---- 54 PP D P PGP P+ +G G +G G G G+ G DR Sbjct: 274 PPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVP 333 Query: 55 GVVGARPR----ASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGG 108 G++G R P QGP L GPPG L PG P P+ + P GGP G Sbjct: 334 GLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGL---PGRRGPPGPKGEAGP--GGPPG 388 Query: 109 PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPER 168 G GD + AG G+ GA G G +GP PG V G ++ Sbjct: 389 VPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPG-PTGPKGEPGFTGRPGGPGVAGALGQK 447 Query: 169 EEVG 172 ++G Sbjct: 448 GDLG 451 Score = 42.0 bits (97), Expect = 0.002 Identities = 59/221 (26%), Positives = 73/221 (33%), Gaps = 78/221 (35%) Query: 9 PPPP----DADPANEPPPPGP-------------MPPAPRRGGGVGVGG--GGTGVGGGD 49 P PP + P EP PPG +P AP +GG G G G G+G Sbjct: 181 PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPG 240 Query: 50 RDRDSGVVGARPRASPP---------------------------------PQGP------ 70 D G G + + PP PQGP Sbjct: 241 LDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE 300 Query: 71 --LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGA 126 GPPG + +P + GP+ + P G PG G G PG+ G Sbjct: 301 PGTRGPPGLIGPTGYGMP--GLPGPKGDRG---PAGVPGLLGDRGEPGEDGEPGEQG--- 352 Query: 127 AGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGGSP 166 G+GG G+ G PG RR PG G G G P Sbjct: 353 ---PQGLGGPPGLPGSAGLPG----RRGPPGPKGEAGPGGP 386 Score = 35.4 bits (80), Expect = 0.14 Identities = 46/166 (27%), Positives = 55/166 (33%), Gaps = 23/166 (13%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDR-DSGVVGARPRA 63 P + PP P P P P R GV G G G D + + G G Sbjct: 301 PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP 360 Query: 64 SPPPQGPLPG---PPGALHRWALAVPPGAVA-----GPR--------PQQASPPPCGGPG 107 P LPG PPG PPG GP P + P GP Sbjct: 361 GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPP 420 Query: 108 GPGGGPGD-ALGAAAAGVGAAGVV-----VGVGGAVGVGGCCSGPG 147 GP G G+ G G AG + +G+ G G+ G PG Sbjct: 421 GPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPG 466 Score = 30.8 bits (68), Expect = 3.5 Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 25/132 (18%) Query: 40 GGGTGVGGGDRDRDSGVVGARP--RASPPPQGPLPGPP-----GALHRWALAVPPGAVAG 92 GGG G G G P P +GP+ GPP G L + P + G Sbjct: 29 GGGAG----------GAAGYAPVKYIQPMQKGPV-GPPFREGKGQYLEMPLPLLPMDLKG 77 Query: 93 PRPQQASPPPCGGPGGPG--GGPGDALGAAAAGVGAAGVV----VGVGGAVGVGGCCSGP 146 P P G PG PG G PG G AG +G G G+ G P Sbjct: 78 EPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPP 137 Query: 147 GHSKRRRQAPGV 158 G R + PG+ Sbjct: 138 GQPGLRGE-PGI 148 >gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo sapiens] Length = 1487 Score = 57.4 bits (137), Expect = 3e-08 Identities = 56/171 (32%), Positives = 63/171 (36%), Gaps = 21/171 (12%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL---- 71 P N PP P PP P G+GG G D +G GA+ P GP+ Sbjct: 158 PGNPGPPGPPGPPGPP-----GLGGNFAAQMAGGFDEKAG--GAQLGVMQGPMGPMGPRG 210 Query: 72 -PGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAG 123 PGP GA PG V+GP + P P G PG G G PG A G Sbjct: 211 PPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPG 270 Query: 124 VGAAGVVVGVGGAVGVGGCCSGPG--HSKRRRQAPGVGAVGGGSPEREEVG 172 A G G GV G PG +K APGV G E G Sbjct: 271 PQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPG 321 Score = 55.1 bits (131), Expect = 2e-07 Identities = 58/175 (33%), Positives = 67/175 (38%), Gaps = 14/175 (8%) Query: 5 PKKKPPPPDADPANEPPPPGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62 P K +A + PGP P AP G GV G G +G GA R Sbjct: 845 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 904 Query: 63 ASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPGGP---GGGPGDAL 117 PP PGPPG P GA +GP P +A P GP GP G PGD Sbjct: 905 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP-PGRAGEPGLQGPAGPPGEKGEPGDDG 963 Query: 118 GAAAAG----VGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 + A G G AG +VG+ G G G PG S + GA G P Sbjct: 964 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGP 1018 Score = 52.0 bits (123), Expect = 1e-06 Identities = 64/204 (31%), Positives = 71/204 (34%), Gaps = 46/204 (22%) Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65 +K P D PPGP PA +G G G G R RD G G P Sbjct: 105 QKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRD-GEPGTPGNPGP 163 Query: 66 P-PQGPLPGPPGALHRWALAV---------------------------PPGAVAGPRPQ- 96 P P GP PGPPG +A + PPG P PQ Sbjct: 164 PGPPGP-PGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 222 Query: 97 -QASPPPCG-----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144 Q +P G GP GP G PGD A G G GA G G Sbjct: 223 FQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPG 282 Query: 145 GPGHSKRRRQAPGV-GAVG-GGSP 166 PG K R PG+ GA G G+P Sbjct: 283 LPG-VKGHRGYPGLDGAKGEAGAP 305 Score = 51.6 bits (122), Expect = 2e-06 Identities = 64/184 (34%), Positives = 71/184 (38%), Gaps = 40/184 (21%) Query: 10 PPPDADPANE------PPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA 59 PP A PA E P P G P PP P GG G G G G+VG Sbjct: 643 PPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAP-----GLVGP 697 Query: 60 R-------PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112 R R SP QG L GP G P GA +GP A PP GP G G Sbjct: 698 RGERGFPGERGSPGAQG-LQGPRGLPGTPGTDGPKGA-SGP----AGPPGAQGPPGLQGM 751 Query: 113 PGDALGAAAAGVGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG--GGSPER 168 PG+ GAAG+ G G VG G PG R +G G G + E+ Sbjct: 752 PGER--------GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803 Query: 169 EEVG 172 EVG Sbjct: 804 GEVG 807 Score = 50.8 bits (120), Expect = 3e-06 Identities = 56/163 (34%), Positives = 62/163 (38%), Gaps = 23/163 (14%) Query: 23 PGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP--PGAL 78 PGPM P P G G G G G D G G P P P GP GP PGA Sbjct: 320 PGPMGPRGLPGERGRTGPAGAA-GARGND-----GQPG--PAGPPGPVGPAGGPGFPGAP 371 Query: 79 HRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVG 138 A P GA GP Q GP G G PG A A+G + G G+ G Sbjct: 372 GAKGEAGPTGA-RGPEGAQ-------GPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAG 423 Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPERE--EVG-AGYNSE 178 G PG R GA G P+ + E G AG+ E Sbjct: 424 APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGE 466 Score = 50.1 bits (118), Expect = 6e-06 Identities = 56/162 (34%), Positives = 58/162 (35%), Gaps = 20/162 (12%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPP 75 P EP P GP AP G G G GG G GA P Q L GP Sbjct: 469 PKGEPGPAGPQG-APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPK 527 Query: 76 GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVV 130 GA P +AGP+ P G PG PG G PGDA G G Sbjct: 528 GAPGERG----PSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDA--------GPQG-K 574 Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172 VG GA G G PG R Q PGV G E G Sbjct: 575 VGPSGAPGEDGRPGPPGPQGARGQ-PGVMGFPGPKGANGEPG 615 Score = 48.9 bits (115), Expect = 1e-05 Identities = 49/153 (32%), Positives = 58/153 (37%), Gaps = 8/153 (5%) Query: 19 EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGP--LPGPP 75 E PPGP A G G G G + D+G G + P +P PQGP + GP Sbjct: 826 ETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG-DAGAPGPQGPSGAPGPQGPTGVTGPK 884 Query: 76 GALHRWALAVPPGAVAGPRPQ-QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVG 134 GA R A PPGA P + PP G GP G PG + G G Sbjct: 885 GA--RGAQG-PPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 941 Query: 135 GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167 G G+ G PG GA G P+ Sbjct: 942 GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQ 974 Score = 48.1 bits (113), Expect = 2e-05 Identities = 57/177 (32%), Positives = 68/177 (38%), Gaps = 12/177 (6%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDRDSGVVGARP 61 PK +P P A P P P G RG GGVG +G G G+R A P Sbjct: 469 PKGEPGP--AGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGP 526 Query: 62 RASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDAL 117 + +P +GP L GP GA PG + G R P G G GP G PG+ Sbjct: 527 KGAPGERGPSGLAGPKGANGDPGRPGEPG-LPGARGLTGRPGDAGPQGKVGPSGAPGEDG 585 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAPGVGAVGGGSPEREEVG 172 G A GV G G G PG + K APG+ + G E G Sbjct: 586 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAG 642 Score = 47.0 bits (110), Expect = 5e-05 Identities = 58/196 (29%), Positives = 74/196 (37%), Gaps = 41/196 (20%) Query: 8 KPPPPDADPANEPPP----PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVG--- 58 +P PP A P PGP P + G G+ G G +D ++G G Sbjct: 586 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPG 645 Query: 59 -ARP------RASPPPQG--PLPGPPGALHRWALAVPPGAVAGPR----PQQASPPPCGG 105 A P + +P P G LPGPPG PPG P P +A P G Sbjct: 646 PAGPAGERGEQGAPGPSGFQGLPGPPG---------PPGEGGKPGDQGVPGEAGAPGLVG 696 Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV------- 158 P G G PG+ A G+ + G G G G SGP + PG+ Sbjct: 697 PRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKG-ASGPAGPPGAQGPPGLQGMPGER 755 Query: 159 GAVGGGSP--EREEVG 172 GA G P +R +VG Sbjct: 756 GAAGIAGPKGDRGDVG 771 Score = 45.1 bits (105), Expect = 2e-04 Identities = 50/162 (30%), Positives = 59/162 (36%), Gaps = 25/162 (15%) Query: 22 PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGPLPGPPGALHR 80 PPGP+ PA GG G G G G GA+ PR P G PGP GA Sbjct: 355 PPGPVGPA----GGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS-PGPAGA--- 406 Query: 81 WALAVPPG--AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGAAGVVVGVGGA 136 + PG + G + +P G PG GP G PG GA G +G G Sbjct: 407 ---SGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ--------GATG-PLGPKGQ 454 Query: 137 VGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178 G G G + + G G P EE G E Sbjct: 455 TGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGE 496 Score = 45.1 bits (105), Expect = 2e-04 Identities = 55/158 (34%), Positives = 65/158 (41%), Gaps = 25/158 (15%) Query: 16 PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73 P EP PG PA G G G+ G G G+ GA P P+GP PG Sbjct: 391 PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA------PGIAGAP--GFPGPRGP-PG 441 Query: 74 PPGA---LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130 P GA L PG +AG + +Q P GP GP G PG A GA G Sbjct: 442 PQGATGPLGPKGQTGEPG-IAGFKGEQG-PKGEPGPAGPQGAPGPA--GEEGKRGARGEP 497 Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP 166 GV G +G G PG+ R PG + G G+P Sbjct: 498 GGV-GPIGPPGERGAPGN----RGFPGQDGLAGPKGAP 530 Score = 44.7 bits (104), Expect = 2e-04 Identities = 58/193 (30%), Positives = 68/193 (35%), Gaps = 39/193 (20%) Query: 13 DADPANEPPPPGPMPPA--PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGAR----PRA 63 D P PPG PA P R G G G G G G DR ++G VGA P Sbjct: 1015 DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPG 1074 Query: 64 SPPPQGPLP-----GPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--------- 107 SP P GP G GA + P GA + GP+ + G PG Sbjct: 1075 SPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRG 1134 Query: 108 -----------GPGGGPGDALGAAAAGV-GAAGVV--VGVGGAVGVGGCCSGPGHSKRRR 153 GP G G + A +G G G V G GA G+ G PG R Sbjct: 1135 FTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSG 1194 Query: 154 QAPGVGAVGGGSP 166 + G G P Sbjct: 1195 ETGPAGPPGNPGP 1207 Score = 44.3 bits (103), Expect = 3e-04 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 18/102 (17%) Query: 9 PPPPDAD--------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 PP P D P+ PPGP+ P+ + G G+ G G R ++G G Sbjct: 1144 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGAN-GIPGPIGPPGPRGRSGETGPAG-- 1200 Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102 P +P P GP PGPPG + A AG P++ P P Sbjct: 1201 PPGNPGPPGP-PGPPGP------GIDMSAFAGLGPREKGPDP 1235 Score = 42.4 bits (98), Expect = 0.001 Identities = 47/142 (33%), Positives = 55/142 (38%), Gaps = 30/142 (21%) Query: 13 DADPANEPPPPGPMPPAPRRG--------GGVGVGG-----------GGTGVGG-GDRDR 52 D A P GP PA RG G G G G TG+ G Sbjct: 1087 DRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG 1146 Query: 53 DSGVVGARPRASPP-PQGPLPGPPGALHRWALAVPPGAVAGPRPQ-------QASPPPCG 104 SG GA A P P+GP PGP G + PG + P P+ A PP Sbjct: 1147 PSGDQGASGPAGPSGPRGP-PGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNP 1205 Query: 105 GPGGPGGGPGDALGAAA-AGVG 125 GP GP G PG + +A AG+G Sbjct: 1206 GPPGPPGPPGPGIDMSAFAGLG 1227 Score = 42.0 bits (97), Expect = 0.002 Identities = 51/176 (28%), Positives = 57/176 (32%), Gaps = 22/176 (12%) Query: 11 PPDADPAN----EPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVGARP 61 PP AN E PPGP A RG G G G G D G G + Sbjct: 793 PPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQG 852 Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDA 116 A PGP G P G V GP+ + + P G G PG G PG Sbjct: 853 EAGQKGDAGAPGPQGPSGAPGPQGPTG-VTGPKGARGAQGPPGATGFPGAAGRVGPPGSN 911 Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172 G G G G G PG R PG+ G E+ E G Sbjct: 912 GNPGPPGPPGPS---GKDGPKGARGDSGPPG----RAGEPGLQGPAGPPGEKGEPG 960 Score = 41.2 bits (95), Expect = 0.003 Identities = 52/173 (30%), Positives = 58/173 (33%), Gaps = 21/173 (12%) Query: 16 PANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-ARPRASPPPQG 69 PA P P G P P G +G G G D ++G G A R P PQG Sbjct: 214 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQG 273 Query: 70 P-----LPGPPGALHRWALAVPPGA-----VAGPRPQQASPPPCGGPG--GPGGGPGD-- 115 PG PG GA G + + SP G PG GP G PG+ Sbjct: 274 ARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERG 333 Query: 116 -ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167 A AAG G G G G GPG G G PE Sbjct: 334 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 386 Score = 41.2 bits (95), Expect = 0.003 Identities = 55/183 (30%), Positives = 59/183 (32%), Gaps = 22/183 (12%) Query: 11 PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP--- 67 P A A PP P A R G G G G G GAR + PP Sbjct: 883 PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 942 Query: 68 ----QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP--CGGPG-----------GPG 110 QGP GPPG P GA P PQ + G PG GP Sbjct: 943 EPGLQGPA-GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPS 1001 Query: 111 GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREE 170 G PG A+G VG G G G G S PG G +R E Sbjct: 1002 GEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG-SPGADGPPGRDGAAGVKGDRGE 1060 Query: 171 VGA 173 GA Sbjct: 1061 TGA 1063 Score = 38.1 bits (87), Expect = 0.022 Identities = 51/169 (30%), Positives = 61/169 (36%), Gaps = 26/169 (15%) Query: 5 PKKKPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR- 60 P+ P P D P P GP P A G G+ G G G+ G DR G VG + Sbjct: 718 PRGLPGTPGTDGPKGASGPAGP-PGAQGPPGLQGMPGERGAAGIAGPKGDR--GDVGEKG 774 Query: 61 PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALG 118 P +P G L GP G PPG AG ++ G GP G G A Sbjct: 775 PEGAPGKDGGRGLTGPIG---------PPGP-AGANGEK-------GEVGPPGPAGSAGA 817 Query: 119 AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167 A G G G G G PG + +A G G P+ Sbjct: 818 RGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQ 866 >gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo sapiens] Length = 1418 Score = 57.4 bits (137), Expect = 3e-08 Identities = 56/171 (32%), Positives = 63/171 (36%), Gaps = 21/171 (12%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL---- 71 P N PP P PP P G+GG G D +G GA+ P GP+ Sbjct: 89 PGNPGPPGPPGPPGPP-----GLGGNFAAQMAGGFDEKAG--GAQLGVMQGPMGPMGPRG 141 Query: 72 -PGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAG 123 PGP GA PG V+GP + P P G PG G G PG A G Sbjct: 142 PPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPG 201 Query: 124 VGAAGVVVGVGGAVGVGGCCSGPG--HSKRRRQAPGVGAVGGGSPEREEVG 172 A G G GV G PG +K APGV G E G Sbjct: 202 PQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPG 252 Score = 55.1 bits (131), Expect = 2e-07 Identities = 58/175 (33%), Positives = 67/175 (38%), Gaps = 14/175 (8%) Query: 5 PKKKPPPPDADPANEPPPPGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62 P K +A + PGP P AP G GV G G +G GA R Sbjct: 776 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 835 Query: 63 ASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPGGP---GGGPGDAL 117 PP PGPPG P GA +GP P +A P GP GP G PGD Sbjct: 836 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP-PGRAGEPGLQGPAGPPGEKGEPGDDG 894 Query: 118 GAAAAG----VGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 + A G G AG +VG+ G G G PG S + GA G P Sbjct: 895 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGP 949 Score = 52.0 bits (123), Expect = 1e-06 Identities = 64/204 (31%), Positives = 71/204 (34%), Gaps = 46/204 (22%) Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65 +K P D PPGP PA +G G G G R RD G G P Sbjct: 36 QKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRD-GEPGTPGNPGP 94 Query: 66 P-PQGPLPGPPGALHRWALAV---------------------------PPGAVAGPRPQ- 96 P P GP PGPPG +A + PPG P PQ Sbjct: 95 PGPPGP-PGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 153 Query: 97 -QASPPPCG-----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144 Q +P G GP GP G PGD A G G GA G G Sbjct: 154 FQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPG 213 Query: 145 GPGHSKRRRQAPGV-GAVG-GGSP 166 PG K R PG+ GA G G+P Sbjct: 214 LPG-VKGHRGYPGLDGAKGEAGAP 236 Score = 51.6 bits (122), Expect = 2e-06 Identities = 64/184 (34%), Positives = 71/184 (38%), Gaps = 40/184 (21%) Query: 10 PPPDADPANE------PPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA 59 PP A PA E P P G P PP P GG G G G G+VG Sbjct: 574 PPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAP-----GLVGP 628 Query: 60 R-------PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112 R R SP QG L GP G P GA +GP A PP GP G G Sbjct: 629 RGERGFPGERGSPGAQG-LQGPRGLPGTPGTDGPKGA-SGP----AGPPGAQGPPGLQGM 682 Query: 113 PGDALGAAAAGVGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG--GGSPER 168 PG+ GAAG+ G G VG G PG R +G G G + E+ Sbjct: 683 PGER--------GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734 Query: 169 EEVG 172 EVG Sbjct: 735 GEVG 738 Score = 50.8 bits (120), Expect = 3e-06 Identities = 56/163 (34%), Positives = 62/163 (38%), Gaps = 23/163 (14%) Query: 23 PGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP--PGAL 78 PGPM P P G G G G G D G G P P P GP GP PGA Sbjct: 251 PGPMGPRGLPGERGRTGPAGAA-GARGND-----GQPG--PAGPPGPVGPAGGPGFPGAP 302 Query: 79 HRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVG 138 A P GA GP Q GP G G PG A A+G + G G+ G Sbjct: 303 GAKGEAGPTGA-RGPEGAQ-------GPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAG 354 Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPERE--EVG-AGYNSE 178 G PG R GA G P+ + E G AG+ E Sbjct: 355 APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGE 397 Score = 50.1 bits (118), Expect = 6e-06 Identities = 56/162 (34%), Positives = 58/162 (35%), Gaps = 20/162 (12%) Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPP 75 P EP P GP AP G G G GG G GA P Q L GP Sbjct: 400 PKGEPGPAGPQG-APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPK 458 Query: 76 GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVV 130 GA P +AGP+ P G PG PG G PGDA G G Sbjct: 459 GAPGERG----PSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDA--------GPQG-K 505 Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172 VG GA G G PG R Q PGV G E G Sbjct: 506 VGPSGAPGEDGRPGPPGPQGARGQ-PGVMGFPGPKGANGEPG 546 Score = 48.9 bits (115), Expect = 1e-05 Identities = 49/153 (32%), Positives = 58/153 (37%), Gaps = 8/153 (5%) Query: 19 EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGP--LPGPP 75 E PPGP A G G G G + D+G G + P +P PQGP + GP Sbjct: 757 ETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG-DAGAPGPQGPSGAPGPQGPTGVTGPK 815 Query: 76 GALHRWALAVPPGAVAGPRPQ-QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVG 134 GA R A PPGA P + PP G GP G PG + G G Sbjct: 816 GA--RGAQG-PPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 872 Query: 135 GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167 G G+ G PG GA G P+ Sbjct: 873 GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQ 905 Score = 48.1 bits (113), Expect = 2e-05 Identities = 57/177 (32%), Positives = 68/177 (38%), Gaps = 12/177 (6%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDRDSGVVGARP 61 PK +P P A P P P G RG GGVG +G G G+R A P Sbjct: 400 PKGEPGP--AGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGP 457 Query: 62 RASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDAL 117 + +P +GP L GP GA PG + G R P G G GP G PG+ Sbjct: 458 KGAPGERGPSGLAGPKGANGDPGRPGEPG-LPGARGLTGRPGDAGPQGKVGPSGAPGEDG 516 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAPGVGAVGGGSPEREEVG 172 G A GV G G G PG + K APG+ + G E G Sbjct: 517 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAG 573 Score = 47.0 bits (110), Expect = 5e-05 Identities = 58/196 (29%), Positives = 74/196 (37%), Gaps = 41/196 (20%) Query: 8 KPPPPDADPANEPPP----PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVG--- 58 +P PP A P PGP P + G G+ G G +D ++G G Sbjct: 517 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPG 576 Query: 59 -ARP------RASPPPQG--PLPGPPGALHRWALAVPPGAVAGPR----PQQASPPPCGG 105 A P + +P P G LPGPPG PPG P P +A P G Sbjct: 577 PAGPAGERGEQGAPGPSGFQGLPGPPG---------PPGEGGKPGDQGVPGEAGAPGLVG 627 Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV------- 158 P G G PG+ A G+ + G G G G SGP + PG+ Sbjct: 628 PRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKG-ASGPAGPPGAQGPPGLQGMPGER 686 Query: 159 GAVGGGSP--EREEVG 172 GA G P +R +VG Sbjct: 687 GAAGIAGPKGDRGDVG 702 Score = 45.1 bits (105), Expect = 2e-04 Identities = 50/162 (30%), Positives = 59/162 (36%), Gaps = 25/162 (15%) Query: 22 PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGPLPGPPGALHR 80 PPGP+ PA GG G G G G GA+ PR P G PGP GA Sbjct: 286 PPGPVGPA----GGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS-PGPAGA--- 337 Query: 81 WALAVPPG--AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGAAGVVVGVGGA 136 + PG + G + +P G PG GP G PG GA G +G G Sbjct: 338 ---SGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ--------GATG-PLGPKGQ 385 Query: 137 VGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178 G G G + + G G P EE G E Sbjct: 386 TGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGE 427 Score = 45.1 bits (105), Expect = 2e-04 Identities = 55/158 (34%), Positives = 65/158 (41%), Gaps = 25/158 (15%) Query: 16 PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73 P EP PG PA G G G+ G G G+ GA P P+GP PG Sbjct: 322 PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA------PGIAGAP--GFPGPRGP-PG 372 Query: 74 PPGA---LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130 P GA L PG +AG + +Q P GP GP G PG A GA G Sbjct: 373 PQGATGPLGPKGQTGEPG-IAGFKGEQG-PKGEPGPAGPQGAPGPA--GEEGKRGARGEP 428 Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP 166 GV G +G G PG+ R PG + G G+P Sbjct: 429 GGV-GPIGPPGERGAPGN----RGFPGQDGLAGPKGAP 461 Score = 44.7 bits (104), Expect = 2e-04 Identities = 58/193 (30%), Positives = 68/193 (35%), Gaps = 39/193 (20%) Query: 13 DADPANEPPPPGPMPPA--PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGAR----PRA 63 D P PPG PA P R G G G G G G DR ++G VGA P Sbjct: 946 DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPG 1005 Query: 64 SPPPQGPLP-----GPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--------- 107 SP P GP G GA + P GA + GP+ + G PG Sbjct: 1006 SPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRG 1065 Query: 108 -----------GPGGGPGDALGAAAAGV-GAAGVV--VGVGGAVGVGGCCSGPGHSKRRR 153 GP G G + A +G G G V G GA G+ G PG R Sbjct: 1066 FTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSG 1125 Query: 154 QAPGVGAVGGGSP 166 + G G P Sbjct: 1126 ETGPAGPPGNPGP 1138 Score = 44.3 bits (103), Expect = 3e-04 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 18/102 (17%) Query: 9 PPPPDAD--------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60 PP P D P+ PPGP+ P+ + G G+ G G R ++G G Sbjct: 1075 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGAN-GIPGPIGPPGPRGRSGETGPAG-- 1131 Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102 P +P P GP PGPPG + A AG P++ P P Sbjct: 1132 PPGNPGPPGP-PGPPGP------GIDMSAFAGLGPREKGPDP 1166 Score = 42.4 bits (98), Expect = 0.001 Identities = 47/142 (33%), Positives = 55/142 (38%), Gaps = 30/142 (21%) Query: 13 DADPANEPPPPGPMPPAPRRG--------GGVGVGG-----------GGTGVGG-GDRDR 52 D A P GP PA RG G G G G TG+ G Sbjct: 1018 DRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG 1077 Query: 53 DSGVVGARPRASPP-PQGPLPGPPGALHRWALAVPPGAVAGPRPQ-------QASPPPCG 104 SG GA A P P+GP PGP G + PG + P P+ A PP Sbjct: 1078 PSGDQGASGPAGPSGPRGP-PGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNP 1136 Query: 105 GPGGPGGGPGDALGAAA-AGVG 125 GP GP G PG + +A AG+G Sbjct: 1137 GPPGPPGPPGPGIDMSAFAGLG 1158 Score = 42.0 bits (97), Expect = 0.002 Identities = 51/176 (28%), Positives = 57/176 (32%), Gaps = 22/176 (12%) Query: 11 PPDADPAN----EPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVGARP 61 PP AN E PPGP A RG G G G G D G G + Sbjct: 724 PPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQG 783 Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDA 116 A PGP G P G V GP+ + + P G G PG G PG Sbjct: 784 EAGQKGDAGAPGPQGPSGAPGPQGPTG-VTGPKGARGAQGPPGATGFPGAAGRVGPPGSN 842 Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172 G G G G G PG R PG+ G E+ E G Sbjct: 843 GNPGPPGPPGPS---GKDGPKGARGDSGPPG----RAGEPGLQGPAGPPGEKGEPG 891 Score = 41.2 bits (95), Expect = 0.003 Identities = 52/173 (30%), Positives = 58/173 (33%), Gaps = 21/173 (12%) Query: 16 PANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-ARPRASPPPQG 69 PA P P G P P G +G G G D ++G G A R P PQG Sbjct: 145 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQG 204 Query: 70 P-----LPGPPGALHRWALAVPPGA-----VAGPRPQQASPPPCGGPG--GPGGGPGD-- 115 PG PG GA G + + SP G PG GP G PG+ Sbjct: 205 ARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERG 264 Query: 116 -ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167 A AAG G G G G GPG G G PE Sbjct: 265 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 317 Score = 41.2 bits (95), Expect = 0.003 Identities = 55/183 (30%), Positives = 59/183 (32%), Gaps = 22/183 (12%) Query: 11 PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP--- 67 P A A PP P A R G G G G G GAR + PP Sbjct: 814 PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 873 Query: 68 ----QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP--CGGPG-----------GPG 110 QGP GPPG P GA P PQ + G PG GP Sbjct: 874 EPGLQGPA-GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPS 932 Query: 111 GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREE 170 G PG A+G VG G G G G S PG G +R E Sbjct: 933 GEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG-SPGADGPPGRDGAAGVKGDRGE 991 Query: 171 VGA 173 GA Sbjct: 992 TGA 994 Score = 38.1 bits (87), Expect = 0.022 Identities = 51/169 (30%), Positives = 61/169 (36%), Gaps = 26/169 (15%) Query: 5 PKKKPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR- 60 P+ P P D P P GP P A G G+ G G G+ G DR G VG + Sbjct: 649 PRGLPGTPGTDGPKGASGPAGP-PGAQGPPGLQGMPGERGAAGIAGPKGDR--GDVGEKG 705 Query: 61 PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALG 118 P +P G L GP G PPG AG ++ G GP G G A Sbjct: 706 PEGAPGKDGGRGLTGPIG---------PPGP-AGANGEK-------GEVGPPGPAGSAGA 748 Query: 119 AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167 A G G G G G PG + +A G G P+ Sbjct: 749 RGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQ 797 >gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo sapiens] Length = 940 Score = 57.0 bits (136), Expect = 5e-08 Identities = 62/189 (32%), Positives = 69/189 (36%), Gaps = 41/189 (21%) Query: 17 ANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ-------- 68 AN PP GP P + G GG G GG G VG R PPP Sbjct: 626 ANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGG----PGGPVGPRLLGPPPPPRGGDPFWD 681 Query: 69 --------GPL---PGP-PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGG-PGGGPGD 115 GP+ PGP PG HR G G P PP G GG GGGP + Sbjct: 682 GPGDPMRGGPMRGGPGPGPGPYHRGR-----GGRGGNEPPPPPPPFRGARGGRSGGGPPN 736 Query: 116 ALGAAAAG-VGAAGVVVGVGGAVGVG---------GCCSGPGHSKRRRQAPGVGAVGGGS 165 G G VG G G G+G G G G R + PG G++GGG Sbjct: 737 GRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPG-GSMGGGG 795 Query: 166 PEREEVGAG 174 R G G Sbjct: 796 GHRPHEGPG 804 Score = 56.6 bits (135), Expect = 6e-08 Identities = 60/194 (30%), Positives = 68/194 (35%), Gaps = 32/194 (16%) Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVGARPR 62 P P + PPGP P P GG G G +G GGD D G R Sbjct: 631 PGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGP--GDPMR 688 Query: 63 ASPPPQGPLPGPPGALHRWALA-------VPPGAVAGPRPQQASPPPCGGPGGPGGG--- 112 P GP PGP G HR PP G R ++ P G GGPGGG Sbjct: 689 GGPMRGGPGPGP-GPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVG 747 Query: 113 -----PGDALGAAAAGVGAAGVVVGVGGAVGVG-------GCCSGPGHSKRRRQAPGVGA 160 P + G G GG +G G G G G R + PG G Sbjct: 748 GGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPG-GG 806 Query: 161 VGGGSPEREEVGAG 174 + GGS R G G Sbjct: 807 ISGGSGHRPHEGPG 820 Score = 53.1 bits (126), Expect = 7e-07 Identities = 54/176 (30%), Positives = 64/176 (36%), Gaps = 19/176 (10%) Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP- 67 PPP DP + P P RGG + GG G G G R R G G P PPP Sbjct: 671 PPPRGGDPFWDGPGD------PMRGGPMR-GGPGPGPGPYHRGR-GGRGGNEPPPPPPPF 722 Query: 68 QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG-----GPGDALGAAAA 122 +G G G P G + G + P GG G G GPG +G+ Sbjct: 723 RGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHR 782 Query: 123 GVGAAGVVVGVGGAVGV-----GGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173 G +G GG GG G GH G+GA GG P G+ Sbjct: 783 PHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGS 838 Score = 52.4 bits (124), Expect = 1e-06 Identities = 56/162 (34%), Positives = 66/162 (40%), Gaps = 26/162 (16%) Query: 18 NEPPPPGPM---PPAPRRGGGVGVGGGGTG---VGGGDRDRDSGVVGARPRASP--PPQG 69 NEPPPP P R GGG G GG G VGGG G G +S P +G Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEG 772 Query: 70 PLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG-----GPGDALGAAAAGV 124 P G G+ HR P G++ G + P GG G G GPG +GA Sbjct: 773 P-GGGMGSGHR-PHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAG---- 826 Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 G G GG++G G GH R + PG G G P Sbjct: 827 GGHRPHEGPGGSMGGSG-----GH--RPHEGPGHGGPHGHRP 861 Score = 45.1 bits (105), Expect = 2e-04 Identities = 53/160 (33%), Positives = 59/160 (36%), Gaps = 31/160 (19%) Query: 24 GPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPP------PQGPL-PGPPG 76 GP P GGG+ V T + G S + +P S P G L PGP Sbjct: 570 GPQGPG---GGGINVQEILTSIMGSPNSHPSEELLKQPDYSDKIKQMLVPHGLLGPGPI- 625 Query: 77 ALHRWALAVPPGAVAGPRPQQASPPPCGGP-GGPGGGPGDALGAAAAGV-----GAAGVV 130 A PPG GP+ Q PP GGP GP GGPG +G G G Sbjct: 626 -----ANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFW 680 Query: 131 VGVG----GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 G G G GG GPG R G G GG P Sbjct: 681 DGPGDPMRGGPMRGGPGPGPGPYHR-----GRGGRGGNEP 715 >gi|48762934 alpha 2 type I collagen [Homo sapiens] Length = 1366 Score = 56.2 bits (134), Expect = 8e-08 Identities = 52/169 (30%), Positives = 63/169 (37%), Gaps = 35/169 (20%) Query: 23 PGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRD-SGVVGARPRASPPPQGPLPGPPGA 77 PGP+ PA RG G +G G G TG G + D+ +G+ GAR P GPPG Sbjct: 477 PGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPG- 535 Query: 78 LHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGG---------------PGDAL 117 P V G + +Q P P G GP GP G PG A Sbjct: 536 ---------PQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAG 586 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 G G G +G G PG + + VGAVG P Sbjct: 587 PRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGP 635 Score = 53.1 bits (126), Expect = 7e-07 Identities = 50/171 (29%), Positives = 58/171 (33%), Gaps = 17/171 (9%) Query: 12 PDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL 71 P A N P P G VG G G G G A PP Sbjct: 201 PGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGA 260 Query: 72 PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVV 130 PGP G + A P G AGPR + P GP GP G PG + L A G GV Sbjct: 261 PGPKGEIGAVGNAGPAGP-AGPR-GEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVA 318 Query: 131 --------------VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167 VG GA G G PG + + ++ G G P+ Sbjct: 319 GAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQ 369 Score = 51.6 bits (122), Expect = 2e-06 Identities = 59/174 (33%), Positives = 65/174 (37%), Gaps = 34/174 (19%) Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVG-VGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68 P A P PPG P AP G +G VG G G R G VG P Sbjct: 242 PVGPAGPIGSAGPPG-FPGAPGPKGEIGAVGNAGPAGPAGPR----GEVGL-----PGLS 291 Query: 69 GPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGV 124 GP+ GPPG PGA + G + P G PG GP G PG V Sbjct: 292 GPV-GPPGN---------PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGP--------V 333 Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178 GAAG G G VG G G S + + G G P EE G N E Sbjct: 334 GAAG-ATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGE 386 Score = 51.6 bits (122), Expect = 2e-06 Identities = 55/165 (33%), Positives = 63/165 (38%), Gaps = 34/165 (20%) Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69 P A PA PPGP A RG G G G+ +G GA R PP Sbjct: 758 PVGAAGPAGPNGPPGP---AGSRGDG-----GPPGM--------TGFPGAAGRTGPPGPS 801 Query: 70 PLPGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAA 122 + GPPG PPG + GPR Q G G GP G G+ + A Sbjct: 802 GISGPPG---------PPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEA 852 Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV-GAVGGGSP 166 G G G +G G PG S+ R PGV GAVG P Sbjct: 853 GTAGPPGTPGPQGLLGAPGILGLPG-SRGERGLPGVAGAVGEPGP 896 Score = 50.4 bits (119), Expect = 4e-06 Identities = 56/178 (31%), Positives = 60/178 (33%), Gaps = 27/178 (15%) Query: 9 PPPPDADPANEPP-PPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65 P PP D + P PPGP P P GG G GVG G G +G P Sbjct: 47 PGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLG-----PGPMGLMGPRGP 101 Query: 66 PPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVG 125 P PGP G A PG P Q P GP GP G G+ G Sbjct: 102 PGAAGAPGPQGF---QGPAGEPG-----EPGQTGPAGARGPAGPPGKAGEDGHPGKPGRP 153 Query: 126 AAGVVVGVGGAVGVGGCCSGPGHS-----------KRRRQAPGVGAVGGGSPEREEVG 172 VVG GA G G PG K + APGV G E G Sbjct: 154 GERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPG 211 Score = 48.9 bits (115), Expect = 1e-05 Identities = 52/172 (30%), Positives = 61/172 (35%), Gaps = 20/172 (11%) Query: 10 PPPDADPANEPPPPGPMPPAPRRG-----GGVGVGGGGTGVG----GGDRDRDSGVVGAR 60 PP + + P PPGP RG G VG G VG G++ A Sbjct: 797 PPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAG 856 Query: 61 PRASPPPQGPLPGP-----PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGD 115 P +P PQG L P PG+ L GAV P P + PP G G PG Sbjct: 857 PPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPP-----GARGPPGA 911 Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166 G G G G G PGH R +G VG G+P Sbjct: 912 VGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGAAGAP 963 Score = 48.5 bits (114), Expect = 2e-05 Identities = 45/159 (28%), Positives = 56/159 (35%), Gaps = 9/159 (5%) Query: 9 PPPPDADPANEPPPPGPMPPA-PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP 67 PP PD + EP G + A P G+ G G+ GG ++ G G R P Sbjct: 614 PPGPDGNKG-EPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEK--GEPGLRGEIGNPG 670 Query: 68 QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA 127 + G PGA+ A P G R + + P G P GP G PG+ AG Sbjct: 671 RDGARGAPGAVG----APGPAGATGDRGEAGAAGPAG-PAGPRGSPGERGEVGPAGPNGF 725 Query: 128 GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166 G G G G G G VG P Sbjct: 726 AGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGP 764 Score = 47.4 bits (111), Expect = 4e-05 Identities = 61/181 (33%), Positives = 68/181 (37%), Gaps = 34/181 (18%) Query: 16 PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73 PA EP PG PA RG G G G G R + GVVG + P LPG Sbjct: 116 PAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPG 175 Query: 74 PPGAL-HRW--ALAVPPGAVA-----GPRPQQASPPPCGGPGGPG-----GGPGDALGAA 120 G H L PGA G + +P G G PG G PG A A Sbjct: 176 FKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPA--GA 233 Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG----VGAVGGGSP-----EREEV 171 G+ G VG G +G G PG APG +GAVG P R EV Sbjct: 234 RGSDGSVG-PVGPAGPIGSAGPPGFPG-------APGPKGEIGAVGNAGPAGPAGPRGEV 285 Query: 172 G 172 G Sbjct: 286 G 286 Score = 46.2 bits (108), Expect = 8e-05 Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 18/150 (12%) Query: 27 PPAPRRGGGVGVGG-----GGTGVGG--GDRDRDSGVVGARPRASPPPQGPLPGPPGALH 79 P AP G G G G TG G G+R R A R S GP+ GP G + Sbjct: 192 PGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPV-GPAGPI- 249 Query: 80 RWALAVPPGAVAGPRPQ-------QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVG 132 A PPG P P+ A P GP G G PG + G A + G Sbjct: 250 --GSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTG 307 Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162 GA G+ G PG R VGA G Sbjct: 308 AKGAAGLPGVAGAPGLPGPRGIPGPVGAAG 337 Score = 46.2 bits (108), Expect = 8e-05 Identities = 57/180 (31%), Positives = 68/180 (37%), Gaps = 19/180 (10%) Query: 17 ANEPPPPGPMPPAPRRGGGVGVGGGG-TGVGGGDRDRD-SGVVGAR-PRASPPPQGPLPG 73 A P P GP+ PA + G G G G G R SG G R + P +GP G Sbjct: 960 AGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPR-G 1018 Query: 74 PPGALHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGGPG-DALGAAAAGVGAA 127 PG L PG +AG Q +P G GP GP G G D VG A Sbjct: 1019 LPGLKGHNGLQGLPG-IAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPA 1077 Query: 128 GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187 G + G G G G PG PG V GG + G Y ++ A + R Sbjct: 1078 G-IRGPQGHQGPAGPPGPPG-------PPGPPGVSGGGYDFGYDGDFYRADQPRSAPSLR 1129 Score = 43.5 bits (101), Expect = 5e-04 Identities = 50/148 (33%), Positives = 59/148 (39%), Gaps = 23/148 (15%) Query: 8 KPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRDSGVVGARPRA 63 K P A P PPGP +RG G G G G G+ G R G+ GA RA Sbjct: 360 KGEPGSAGPQG---PPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSR--GLPGADGRA 414 Query: 64 SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAA 121 + GPPG+ A P V GP P P GP G G PG+ A Sbjct: 415 G------VMGPPGSRG----ASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGK 464 Query: 122 AG-VGAAGVVVGVGGAVGVGGCCSGPGH 148 G VG G + G G +G G PG+ Sbjct: 465 EGPVGLPG-IDGRPGPIGPAGARGEPGN 491 Score = 43.1 bits (100), Expect = 7e-04 Identities = 45/143 (31%), Positives = 51/143 (35%), Gaps = 25/143 (17%) Query: 30 PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVG----ARPRASPPPQGPL--PGPPGALHR 80 P R G G G G G G DR ++G G A PR SP +G + GP G Sbjct: 669 PGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGP 728 Query: 81 WALAVPPGA--------------VAGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGV 124 A PGA V GP + P G GP GP G GD G Sbjct: 729 AGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGF 788 Query: 125 GAAGVVVGVGGAVGVGGCCSGPG 147 A G G G+ G PG Sbjct: 789 PGAAGRTGPPGPSGISGPPGPPG 811 Score = 41.6 bits (96), Expect = 0.002 Identities = 59/194 (30%), Positives = 66/194 (34%), Gaps = 35/194 (18%) Query: 11 PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70 P A P E PPG A G +G G G + GVVGA A P Sbjct: 582 PGPAGPRGERGPPGESGAAGPTGP-IGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSG 640 Query: 71 LPGPPGALHRWALAVPPG----AVAGPRPQQASPPPCGGPGGPG-----------GGPGD 115 LPG GA +P G G R + +P G G PG G G+ Sbjct: 641 LPGERGAA-----GIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGE 695 Query: 116 ALGAAAAG-------VGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVG 162 A A AG G G V G G G G PG +K R A G G VG Sbjct: 696 AGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPG-AKGERGAKGPKGENGVVG 754 Query: 163 GGSPEREEVGAGYN 176 P AG N Sbjct: 755 PTGPVGAAGPAGPN 768 Score = 41.6 bits (96), Expect = 0.002 Identities = 45/147 (30%), Positives = 51/147 (34%), Gaps = 19/147 (12%) Query: 11 PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70 P A EP P G P RG VG G G+ RD G PP + Sbjct: 885 PGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRD----GNPGNDGPPGRDG 940 Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130 PG G P GA P P GP GP G G+ +G Sbjct: 941 QPGHKGERGYPGNIGPVGAAGAPGPH--------GPVGPAGKHGNRGETGPSGP------ 986 Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPG 157 VG GAVG G SGP + + PG Sbjct: 987 VGPAGAVGPRG-PSGPQGIRGDKGEPG 1012 Score = 38.5 bits (88), Expect = 0.017 Identities = 38/124 (30%), Positives = 43/124 (34%), Gaps = 30/124 (24%) Query: 10 PPPDADPANEPPPPGPMPPAPRRG--------GGVGVGG--------GGTGVGG--GDRD 51 P PA P GP P RG G G+ G G G+ G GD+ Sbjct: 983 PSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042 Query: 52 RDSGVVGARPRASPPPQGPL-----PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGP 106 V A PR P GP G PG V P + GP+ Q P G P Sbjct: 1043 APGSVGPAGPRGPAGPSGPAGKDGRTGHPGT-------VGPAGIRGPQGHQGPAGPPGPP 1095 Query: 107 GGPG 110 G PG Sbjct: 1096 GPPG 1099 Score = 38.1 bits (87), Expect = 0.022 Identities = 50/186 (26%), Positives = 58/186 (31%), Gaps = 34/186 (18%) Query: 10 PPPDADPANEPPPPGPM-------------PPAPRRGGGVGVGGGGTGVGGGDRDRDSGV 56 P A P P PGP P PR G VG+ G VG +G+ Sbjct: 248 PIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPR--GEVGLPGLSGPVGPPGNPGANGL 305 Query: 57 VGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG---------- 104 GA+ A P PG PG + P GA G R P P G Sbjct: 306 TGAKGAAGLPGVAGAPGLPGPR---GIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGE 362 Query: 105 ----GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGA 160 GP GP G G+ G + G G G G PG R G+ Sbjct: 363 PGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGS 422 Query: 161 VGGGSP 166 G P Sbjct: 423 RGASGP 428 Score = 37.0 bits (84), Expect = 0.048 Identities = 43/145 (29%), Positives = 49/145 (33%), Gaps = 10/145 (6%) Query: 23 PGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWA 82 PGP+ A G VG G G+ A P+ P P G G G Sbjct: 330 PGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGE-EGKRGPNGEAG 388 Query: 83 LAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAV 137 A PPG P + SP G PG G G PG + AGV G G Sbjct: 389 SAGPPG----PPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEP 444 Query: 138 GVGGCCSGPGHSKRRRQAPGVGAVG 162 G+ G PG A G VG Sbjct: 445 GLMGPRGLPGSPGNIGPAGKEGPVG 469 Score = 35.0 bits (79), Expect = 0.18 Identities = 35/114 (30%), Positives = 39/114 (34%), Gaps = 11/114 (9%) Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120 P P+G GPPG PPG P PP G PG PG G A Sbjct: 34 PAGDRGPRGER-GPPG---------PPGRDGEDGPTGPPGPP-GPPGPPGLGGNFAAQYD 82 Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174 GVG +G+ G G G PG + A G G P AG Sbjct: 83 GKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAG 136 >gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] Length = 1690 Score = 56.2 bits (134), Expect = 8e-08 Identities = 61/200 (30%), Positives = 68/200 (34%), Gaps = 35/200 (17%) Query: 9 PPPPDADPANEPPPPG-----------------PMPPAPRRGGGVGVGGGGTGVGGGDRD 51 PP PD P P PPG P PP P G G G G D Sbjct: 1265 PPGPDG-PRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQ 1323 Query: 52 RDS----GVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG 107 + G G PP + LPGPPG L P G P P G PG Sbjct: 1324 KGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPG 1383 Query: 108 GPG-GGPGDALG----AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162 PG GP A+G +G G G G+ G GV G PG R+ G G Sbjct: 1384 APGMRGPEGAMGLPGMRGPSGPGCKG-EPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPG 1442 Query: 163 G-------GSPEREEVGAGY 175 G G P + G GY Sbjct: 1443 GPGPPGPIGDPGPKGFGPGY 1462 Score = 48.9 bits (115), Expect = 1e-05 Identities = 50/146 (34%), Positives = 58/146 (39%), Gaps = 21/146 (14%) Query: 9 PPPPDADPANEPPPPGPM--PPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRAS 64 P DPA+ PPGP P +P G G G G G+ G G+ R Sbjct: 1070 PKGNKGDPASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGI--------QGPRGSPGRPG 1121 Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCGGPG--GPGGGPG----DA 116 PP PG PG L PG + GPR Q P G PG GP G PG Sbjct: 1122 PPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHG 1181 Query: 117 LGAAAAGVGAAGV-VVGVGGAVGVGG 141 L GA+G+ VG G VG+ G Sbjct: 1182 LKGQKGTKGASGLHDVGPPGPVGIPG 1207 Score = 47.8 bits (112), Expect = 3e-05 Identities = 46/150 (30%), Positives = 51/150 (34%), Gaps = 16/150 (10%) Query: 9 PPPPDADPA-----NEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63 PP P P +P PG PP PR G G +G G +G G P+ Sbjct: 1199 PPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGPPG-----PAGATGRAPKD 1253 Query: 64 SPPPQGP-LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGGPGDAL 117 P P P GPPG PPG + P CG GP GP G PG Sbjct: 1254 IPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKG 1313 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147 G VG G G G PG Sbjct: 1314 FPGCDGKDGQKGPVGFPGPQGPHGFPGPPG 1343 Score = 43.9 bits (102), Expect = 4e-04 Identities = 49/158 (31%), Positives = 62/158 (39%), Gaps = 43/158 (27%) Query: 12 PDADPANE--PPPPGPM--PPAPRRG--GGVGVGG-----------GGTGVGGGDRDRDS 54 P DP N P PPG + PP P +G G G G G G+ G + + Sbjct: 342 PKGDPGNRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACA 401 Query: 55 GVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GG 112 G++G P PQG PG PG PG P ++P G PG PG G Sbjct: 402 GMIGP-----PGPQG-FPGLPGL---------PGEAGIPGRPDSAPGKPGKPGSPGLPGA 446 Query: 113 PGDALGAAAAGVGAAGVV---VGVGGAVGVGGCCSGPG 147 PG G+ + V+ VG G G+ G PG Sbjct: 447 PG------LQGLPGSSVIYCSVGNPGPQGIKGKVGPPG 478 Score = 42.7 bits (99), Expect = 9e-04 Identities = 47/150 (31%), Positives = 54/150 (36%), Gaps = 23/150 (15%) Query: 12 PDADPANEPPPPGPMPPAPRRG--GGVGVGG--------GGTGVGGGDRDRDSGVVGARP 61 P+ P PPGP P G G +G+ G G G G D+ V P Sbjct: 59 PEKGSRGPPGPPGPQGPIGPLGAPGPIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFP 118 Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG--GPGGPGGGPGDAL 117 P PGPPG + PG G R P G GPGGP G PG+ Sbjct: 119 GLDGIPGH--PGPPGPRGK------PGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEK- 169 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147 G V G V G+ G G G PG Sbjct: 170 GEKGNSVFILGAVKGIQGDRGDPGLPGLPG 199 Score = 42.0 bits (97), Expect = 0.002 Identities = 36/115 (31%), Positives = 40/115 (34%), Gaps = 9/115 (7%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGA 59 P +K P P EP PP + PR G G G G G+ G G G Sbjct: 1351 PGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGPEGAMGLPGMRGPSGPGCKGE 1410 Query: 60 RPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG 114 +PG PG R G GP P P P G PG G GPG Sbjct: 1411 PGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGGPGP----PGPIGDPGPKGFGPG 1461 Score = 41.6 bits (96), Expect = 0.002 Identities = 54/173 (31%), Positives = 58/173 (33%), Gaps = 36/173 (20%) Query: 22 PPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPP----PQGP----L 71 PPG P P G G G G G G D G G PP P GP Sbjct: 576 PPG-FPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGF 634 Query: 72 PGPPGALHRWALAVPPGAVAGPR----------------PQQASPPPCGGPGGPGGGPGD 115 PGPPG + PG V GP P + PP GP GP G PG Sbjct: 635 PGPPGERGHPGVPGHPG-VRGPDGLKGQKGDTISCNVTYPGRHGPPGFDGPPGPKGFPGP 693 Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQA--PGVGAVGGGSP 166 A G+ + G G G G PG R PG G G SP Sbjct: 694 ---QGAPGLSGSD---GHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSP 740 Score = 40.0 bits (92), Expect = 0.006 Identities = 63/204 (30%), Positives = 72/204 (35%), Gaps = 44/204 (21%) Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRAS 64 PP A P P P PP R G GV G G G+ G D S V R Sbjct: 620 PPGKAGPVGPPGLGFPGPPGER--GHPGVPGHPGVRGPDGLKGQKGDTISCNVTYPGRHG 677 Query: 65 PP----PQGP--LPGPPGAL-------HRWALAVPPGA-VAGP---RPQQASP------- 100 PP P GP PGP GA H+ P A + GP R P Sbjct: 678 PPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKG 737 Query: 101 -PPCGGPGGPG--------GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKR 151 P G PG PG G PGD A +G G G+ G G+ G PG Sbjct: 738 SSPVGPPGPPGSPGVNGQKGIPGD---PAFGHLGPPG-KRGLSGVPGIKGPRGDPGCPGA 793 Query: 152 RRQAPGVGAVGGGSPEREEVGAGY 175 A G +G P+ E AG+ Sbjct: 794 EGPAGIPGFLGLKGPKGREGHAGF 817 Score = 39.7 bits (91), Expect = 0.007 Identities = 49/170 (28%), Positives = 57/170 (33%), Gaps = 29/170 (17%) Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGG--GDRDRDSGV 56 M I+ +K P EP PPG P G G G G G G G G Sbjct: 965 MAIISQKGTP-------GEPGPPGD-DGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGE 1016 Query: 57 VGARPRASPP-PQGP-----------LPGPPGALHRWALAVPPG-----AVAGPRPQQAS 99 G + + PP P GP PG PG PPG GP+ + Sbjct: 1017 PGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGD 1076 Query: 100 PPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS 149 P GP GP G PG G + G+ G G G PG S Sbjct: 1077 PASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGIQGPRGSPGRPGPPGSS 1126 Score = 38.9 bits (89), Expect = 0.013 Identities = 44/142 (30%), Positives = 52/142 (36%), Gaps = 14/142 (9%) Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-----ARPRAS 64 PP + P PG P P G G GG G +G+ G RP A Sbjct: 823 PPGHSCERGAPGIPG-QPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAH 881 Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGA 119 PP LPG PG L PPG GPR P G G PG G G+ Sbjct: 882 GPPG--LPGIPGPFGDDGLPGPPGP-KGPRGLPGFPGFPGERGKPGAEGCPGAKGEPGEK 938 Query: 120 AAAGVGAAGVVVGVGGAVGVGG 141 +G+ + G GA+G G Sbjct: 939 GMSGLPGDRGLRGAKGAIGPPG 960 Score = 38.5 bits (88), Expect = 0.017 Identities = 55/198 (27%), Positives = 67/198 (33%), Gaps = 54/198 (27%) Query: 13 DADPANEPPPPG-------PMPPAPR-----------RGG-GVGVGGGGTGVGG------ 47 D P P PG P PP PR RG G G G G GG Sbjct: 108 DKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPG 167 Query: 48 --GDRDRDSGVVGARPRASPPPQGP-LPGPPGALHRWALAVPPGAVAGP-RPQQASPPPC 103 G++ ++GA P LPG PG+ W P G P P PP Sbjct: 168 EKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGS---WGAGGPAGPTGYPGEPGLVGPP-- 222 Query: 104 GGPGGPG--GGPGDALGAAAAGVGAAG-----------------VVVGVGGAVGVGGCCS 144 G PG PG G PG + G G + G G G+ G Sbjct: 223 GQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMVG 282 Query: 145 GPGHSKRRRQAPGVGAVG 162 PG R+ ++ G+GA G Sbjct: 283 LPGPPGRKGES-GIGAKG 299 Score = 38.5 bits (88), Expect = 0.017 Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 6/125 (4%) Query: 19 EPPPPGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPG 76 +P PPG P P + G G G G R G G R PP PG PG Sbjct: 528 DPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGERGPDGPPG---FPGQPG 584 Query: 77 ALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGA 136 + R A G P + + P G GP G PG A G+G G G G Sbjct: 585 SHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGFPG-PPGERGH 643 Query: 137 VGVGG 141 GV G Sbjct: 644 PGVPG 648 Score = 37.7 bits (86), Expect = 0.028 Identities = 50/158 (31%), Positives = 59/158 (37%), Gaps = 41/158 (25%) Query: 22 PPGPMPPAPRRGGGVGVGG-------------GGTGVGGGDRDR-DSGVVGARPRASPPP 67 PPGP P +P G G+ G G +GV G R D G GA A P Sbjct: 743 PPGP-PGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPG 801 Query: 68 ----QGP-----------LPGPPG-ALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG- 110 +GP +PGPPG + R A +P Q P G PG PG Sbjct: 802 FLGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPG--------QPGLPGYPGSPGAPGG 853 Query: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147 G PGD AG+ + G GA G G PG Sbjct: 854 KGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPG 891 Score = 37.4 bits (85), Expect = 0.037 Identities = 49/145 (33%), Positives = 56/145 (38%), Gaps = 22/145 (15%) Query: 20 PPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGA-RPRASPPPQGPLPGPPG 76 P PGP P G G G G G+ G D G+ G P+ P +G PGPPG Sbjct: 304 PGFPGPRGD-PGSYGSPGFPGLKGELGLVG-----DPGLFGLIGPKGDPGNRGH-PGPPG 356 Query: 77 ALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPG--DALGAAAAGVGAAGVVVG 132 L PP + GP P G G GP G PG G A AG+ G Sbjct: 357 -----VLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQG 411 Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPG 157 G G+ G PG R APG Sbjct: 412 FPGLPGLPGEAGIPG---RPDSAPG 433 Score = 34.7 bits (78), Expect = 0.24 Identities = 44/137 (32%), Positives = 49/137 (35%), Gaps = 18/137 (13%) Query: 38 VGGGGTGVGGGDRDRDSGVVGARP-RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQ 96 V G G G RD V P + S P GP PGP G P G + P P Sbjct: 36 VYGSGKKYIGPCGGRDCSVCHCVPEKGSRGPPGP-PGPQG---------PIGPLGAPGPI 85 Query: 97 QASPPP-CGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRR--R 153 S G GP G GD GV + G+ G G G PG S R Sbjct: 86 GLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNGSR 145 Query: 154 QAPGV----GAVGGGSP 166 PG GA+G G P Sbjct: 146 GDPGFPGGRGALGPGGP 162 Score = 34.7 bits (78), Expect = 0.24 Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 25/115 (21%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR-- 60 P+ +P PP AD + P PG +P AP G G G G G G + G+ G R Sbjct: 1362 PRGEPGPP-ADVDDCPRIPG-LPGAPGMRGPEGAMGLPGMRGPSGPGCKGEPGLDGRRGV 1419 Query: 61 ---PRASPPP-------QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGG 105 P + PP + PG PG PPG + P P+ P GG Sbjct: 1420 DGVPGSPGPPGRKGDTGEDGYPGGPG---------PPGPIGDPGPKGFGPGYLGG 1465 Score = 33.1 bits (74), Expect = 0.70 Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 15/146 (10%) Query: 14 ADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73 A P P PG + P P + G G+ G GVG + D G VG + SP P + Sbjct: 207 AGPTGYPGEPGLVGP-PGQPGRPGLKGN-PGVGVKGQMGDPGEVGQQ--GSPGPTLLVEP 262 Query: 74 PPGALHRWALAVP--PGAVAGPRPQQ-------ASPPPCGGPG--GPGGGPGDALGAAAA 122 P L++ + PG V P P + G PG GP G PG Sbjct: 263 PDFCLYKGEKGIKGIPGMVGLPGPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFP 322 Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGH 148 G+ +VG G G+ G PG+ Sbjct: 323 GLKGELGLVGDPGLFGLIGPKGDPGN 348 Score = 30.8 bits (68), Expect = 3.5 Identities = 37/138 (26%), Positives = 49/138 (35%), Gaps = 14/138 (10%) Query: 20 PPPPGPMPPAPRRGGGVGVGGG-GTGVGGGDRDRDSGVVGARPRASPPPQGPL------P 72 PP P P P G G+ G + G + G+ GA P + P Sbjct: 406 PPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVIYCSVGNP 465 Query: 73 GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVV- 130 GP G + PPG GP+ ++ + C GP G PG L G G+ Sbjct: 466 GPQGIKGKVG---PPGG-RGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPG 521 Query: 131 -VGVGGAVGVGGCCSGPG 147 +G G G G PG Sbjct: 522 WLGTKGDPGPPGAEGPPG 539 >gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] Length = 416 Score = 56.2 bits (134), Expect = 8e-08 Identities = 40/116 (34%), Positives = 46/116 (39%), Gaps = 20/116 (17%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58 P+ PP P PPPPG P +GG G G GG + R S Sbjct: 242 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPP 301 Query: 59 ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109 +P+ PP G P GPP PPG GP PQ + PPP G P GP Sbjct: 302 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 348 Score = 53.9 bits (128), Expect = 4e-07 Identities = 39/115 (33%), Positives = 45/115 (39%), Gaps = 19/115 (16%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGG-----DRDRDSGVVGA 59 P+ PP P PPPPG P +GG G G G D+ R Sbjct: 57 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPG 116 Query: 60 RPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109 +P+ PP G P GPP PPG GP PQ + PPP G P GP Sbjct: 117 KPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 162 Score = 53.9 bits (128), Expect = 4e-07 Identities = 39/116 (33%), Positives = 46/116 (39%), Gaps = 20/116 (17%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58 P+ PP P PPPPG P +GG G G G ++ R S Sbjct: 118 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPP 177 Query: 59 ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109 +P+ PP G P GPP PPG GP PQ + PPP G P GP Sbjct: 178 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 224 Score = 52.4 bits (124), Expect = 1e-06 Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 P+ PP P PPPPG P +GG G G G + G++ R++ Sbjct: 304 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG----GSKSRSA 359 Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113 P G GPP PP A G PQQ PP G P GP P Sbjct: 360 RSPPGKPQGPPQQEGNNPQGPPPPA--GGNPQQPQAPPAGQPQGPPRPP 406 Score = 51.2 bits (121), Expect = 2e-06 Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 20/116 (17%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58 P+ PP P PPPPG P +GG G G G ++ + + Sbjct: 180 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPP 239 Query: 59 ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109 +P+ PP G P GPP PPG GP PQ + PPP G P GP Sbjct: 240 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 286 Score = 47.0 bits (110), Expect = 5e-05 Identities = 37/111 (33%), Positives = 43/111 (38%), Gaps = 10/111 (9%) Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65 K + PPP D + P P P P GG G G G G +P+ P Sbjct: 97 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GNKPQGPP 154 Query: 66 PPQGPL-PGPPGALHRWALAVPPGAVAGP------RPQQASPPPCGGPGGP 109 PP P P P G + PPG GP +PQ PPP G P GP Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP-GKPQGP 204 Score = 46.2 bits (108), Expect = 8e-05 Identities = 43/136 (31%), Positives = 51/136 (37%), Gaps = 36/136 (26%) Query: 9 PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGGG-------GTGVGGGDRD 51 PPPP P PP P GP PP P +G G GG++ Sbjct: 194 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP 253 Query: 52 RDSGVVGARPRASPP-----PQGPLP-----GPP--GALHRWALAVPPGAVAGP------ 93 + +P+ PP PQGP P GPP G + PPG GP Sbjct: 254 QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGN 313 Query: 94 RPQQASPPPCGGPGGP 109 +PQ PPP G P GP Sbjct: 314 QPQGPPPPP-GKPQGP 328 Score = 45.8 bits (107), Expect = 1e-04 Identities = 37/111 (33%), Positives = 42/111 (37%), Gaps = 10/111 (9%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 P+ PP P P PPG P P GG G G G G +P+ Sbjct: 36 PQGAPPQGGNKPQGPPSPPGK-PQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GNKPQGP 92 Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGP------RPQQASPPPCGGPGGP 109 PPP P PP + PPG GP +PQ PPP G P GP Sbjct: 93 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP-GKPQGP 142 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 30/97 (30%) Query: 9 PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGG------------------ 40 PPPP P PP P GP PP P +GG Sbjct: 318 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNP 377 Query: 41 -GGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPP 75 G GG+ + +P+ P PPQG P P Sbjct: 378 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 56.2 bits (134), Expect = 8e-08 Identities = 48/152 (31%), Positives = 53/152 (34%), Gaps = 29/152 (19%) Query: 5 PKKKPPPPDAD---------------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGD 49 P PPPP A A PP PGP P PR + Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAP---- 184 Query: 50 RDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGP 109 A P A PP GP PP A+ +PP PQQ PPP P Sbjct: 185 ---------AAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPP 235 Query: 110 GGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141 GG A G AA V VV +GG+ G GG Sbjct: 236 EGGAVRA-GGAARPVSLREVVRYLGGSGGAGG 266 Score = 37.4 bits (85), Expect = 0.037 Identities = 33/111 (29%), Positives = 36/111 (32%), Gaps = 16/111 (14%) Query: 19 EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPPGA 77 +PP G PPAP R R + A P +P PP P P A Sbjct: 100 QPPRRGATPPAPPRA---------------PRGAPAAAAAAAPPPTPAPPPPPAPVAAAA 144 Query: 78 LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAG 128 R A A A P P A P P P P A A A AG Sbjct: 145 PARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195 Score = 35.4 bits (80), Expect = 0.14 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 43/130 (33%) Query: 5 PKKKPPP------PDADPANEPPPPG----PMPPAPR---RGGGVGVGG----------- 40 P++ PPP P P +PP P P PP P+ GG V GG Sbjct: 196 PRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVV 255 Query: 41 ---GGTGVGGG--DRDRDSGVVGARPRASPPPQGPLPGPPGALHR---WALAVPPGAVAG 92 GG+G GG R R G++ A G L R ALA+P G G Sbjct: 256 RYLGGSGGAGGRLTRGRVQGLLEEEAAAR-----------GRLERTRLGALALPRGDRPG 304 Query: 93 PRPQQASPPP 102 P AS P Sbjct: 305 RAPPAASARP 314 Score = 32.3 bits (72), Expect = 1.2 Identities = 20/61 (32%), Positives = 21/61 (34%) Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121 R PP +G P P R A A A P P PP P P A AA Sbjct: 98 RVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAAT 157 Query: 122 A 122 A Sbjct: 158 A 158 >gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo sapiens] Length = 921 Score = 55.5 bits (132), Expect = 1e-07 Identities = 58/178 (32%), Positives = 68/178 (38%), Gaps = 22/178 (12%) Query: 5 PKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-- 60 PK P PP PA EP PG P P G G G +G + + GV G+R Sbjct: 297 PKGPPGPP--GPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGF 354 Query: 61 -PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL 117 R P P GP G PG L R PG P P P P G G G GD L Sbjct: 355 PGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP----PGPPGPRGTIGFHDGDPL 410 Query: 118 GAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173 A G +G + G+ G G G PG + + G +G EVGA Sbjct: 411 CPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELG-------EVGA 461 Score = 49.7 bits (117), Expect = 7e-06 Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 35/185 (18%) Query: 22 PPGPMPPAPRRG--GGVGVGG-----GGTGVGGGD-RDRDSGVVGARPRASPP-PQGP-- 70 PPG P RG G G+ G G TG+ G D RD G+ G + P P G Sbjct: 509 PPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAG 568 Query: 71 ---LPGPPGALHRWALAVPPGAVAGP----------RPQQASPPPCGGPGGPGGGPGDAL 117 LPG PG +A G+ P +P Q PP GP GP G PG Sbjct: 569 LQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRG 628 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVGGGSPEREEVGA 173 G +G G+ G+ G PG PG+ G VG P+ E+ + Sbjct: 629 ELGPVGSPGLPGKLGSLGSPGLPGLPGPPG-------LPGMKGDRGVVGEPGPKGEQGAS 681 Query: 174 GYNSE 178 G E Sbjct: 682 GEEGE 686 Score = 37.4 bits (85), Expect = 0.037 Identities = 49/161 (30%), Positives = 54/161 (33%), Gaps = 33/161 (20%) Query: 12 PDADPANEPPPPGPMPPAPRRGGGVGVGG---------GGTGVGGGDRDRDSGVVGARPR 62 P DP PP P PP PR G G G +G G R G GA+ Sbjct: 380 PVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMR--GHKGAKGE 437 Query: 63 ASPP----------PQGPL-----PGPPGA--LHRWALAVPPGAVAGPRPQQASPPPCGG 105 P QG L GPPGA L V G R P P G Sbjct: 438 IGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGL 497 Query: 106 PGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141 PG PG G PG+A G A + G+ G G G Sbjct: 498 PGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTG 538 Score = 36.2 bits (82), Expect = 0.082 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 24/111 (21%) Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121 R P QGP PGPPG PPG G GP G PG A Sbjct: 268 RGPPGEQGP-PGPPG---------PPGV--------PGIDGIDGDRGPKGPPGPPGPAGE 309 Query: 122 AGVGAAGVVVGVGGAVGVGGCCSGPGH--SKRRRQAPGV----GAVGGGSP 166 G A G GA G+ G PG SK ++ PGV G G G P Sbjct: 310 PGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIP 360 Score = 35.0 bits (79), Expect = 0.18 Identities = 34/111 (30%), Positives = 38/111 (34%), Gaps = 8/111 (7%) Query: 53 DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112 DSG G R PP GP PGPPG P P PP G GP G Sbjct: 785 DSGATGLPGRPGPP--GP-PGPPGEN-----GFPGQMGIRGLPGIKGPPGALGLRGPKGD 836 Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163 G+ G G G+ +G G G R PGV + G Sbjct: 837 LGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPG 887 Score = 34.7 bits (78), Expect = 0.24 Identities = 51/201 (25%), Positives = 65/201 (32%), Gaps = 49/201 (24%) Query: 9 PPPP-------DADPANEPPPPGPMPPAPRRG--------GGVGVGGGGTGVGGGDRDRD 53 P PP D EP P G + G G +G+ G G Sbjct: 654 PGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGL 713 Query: 54 SGVVGAR-------PRASPPPQGPLPGPPGALHRWALAVPPG------------------ 88 G G+R PR P P+G + G GA + PPG Sbjct: 714 RGPEGSRGLPGVEGPRGPPGPRG-VQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQE 772 Query: 89 -----AVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141 A + RP + P GP GP G PG+ G+ + G GA+G+ G Sbjct: 773 HFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRG 832 Query: 142 CCSGPGHSKRRRQAPGVGAVG 162 G K R PG G G Sbjct: 833 -PKGDLGEKGERGPPGRGPNG 852 Score = 33.1 bits (74), Expect = 0.70 Identities = 41/137 (29%), Positives = 44/137 (32%), Gaps = 24/137 (17%) Query: 12 PDADPANEPPPPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70 PD+ P PGP PP P G G G G+ G PP Sbjct: 784 PDSGATGLPGRPGPPGPPGPP---------GENGFPG-----QMGIRGLPGIKGPPGALG 829 Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG----GGPGDALGAAAAGVGA 126 L GP G L PPG R P G PG PG G G GV Sbjct: 830 LRGPKGDLGEKGERGPPG-----RGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAG 884 Query: 127 AGVVVGVGGAVGVGGCC 143 V G G G+ G C Sbjct: 885 IPGVPGPPGPPGLPGFC 901 >gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo sapiens] Length = 678 Score = 55.5 bits (132), Expect = 1e-07 Identities = 58/178 (32%), Positives = 68/178 (38%), Gaps = 22/178 (12%) Query: 5 PKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-- 60 PK P PP PA EP PG P P G G G +G + + GV G+R Sbjct: 54 PKGPPGPP--GPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGF 111 Query: 61 -PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL 117 R P P GP G PG L R PG P P P P G G G GD L Sbjct: 112 PGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP----PGPPGPRGTIGFHDGDPL 167 Query: 118 GAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173 A G +G + G+ G G G PG + + G +G EVGA Sbjct: 168 CPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELG-------EVGA 218 Score = 49.7 bits (117), Expect = 7e-06 Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 35/185 (18%) Query: 22 PPGPMPPAPRRG--GGVGVGG-----GGTGVGGGD-RDRDSGVVGARPRASPP-PQGP-- 70 PPG P RG G G+ G G TG+ G D RD G+ G + P P G Sbjct: 266 PPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAG 325 Query: 71 ---LPGPPGALHRWALAVPPGAVAGP----------RPQQASPPPCGGPGGPGGGPGDAL 117 LPG PG +A G+ P +P Q PP GP GP G PG Sbjct: 326 LQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRG 385 Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVGGGSPEREEVGA 173 G +G G+ G+ G PG PG+ G VG P+ E+ + Sbjct: 386 ELGPVGSPGLPGKLGSLGSPGLPGLPGPPG-------LPGMKGDRGVVGEPGPKGEQGAS 438 Query: 174 GYNSE 178 G E Sbjct: 439 GEEGE 443 Score = 38.1 bits (87), Expect = 0.022 Identities = 43/130 (33%), Positives = 47/130 (36%), Gaps = 33/130 (25%) Query: 52 RDSGVVG---------ARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102 RD G +G A R P QGP PGPPG PPG Sbjct: 6 RDRGALGLLLLGLCLCAAQRGPPGEQGP-PGPPG---------PPGV--------PGIDG 47 Query: 103 CGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH--SKRRRQAPGV-- 158 G GP G PG A G A G GA G+ G PG SK ++ PGV Sbjct: 48 IDGDRGPKGPPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPG 107 Query: 159 --GAVGGGSP 166 G G G P Sbjct: 108 SRGFPGRGIP 117 Score = 37.4 bits (85), Expect = 0.037 Identities = 49/161 (30%), Positives = 54/161 (33%), Gaps = 33/161 (20%) Query: 12 PDADPANEPPPPGPMPPAPRRGGGVGVGG---------GGTGVGGGDRDRDSGVVGARPR 62 P DP PP P PP PR G G G +G G R G GA+ Sbjct: 137 PVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMR--GHKGAKGE 194 Query: 63 ASPP----------PQGPL-----PGPPGA--LHRWALAVPPGAVAGPRPQQASPPPCGG 105 P QG L GPPGA L V G R P P G Sbjct: 195 IGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGL 254 Query: 106 PGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141 PG PG G PG+A G A + G+ G G G Sbjct: 255 PGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTG 295 Score = 35.0 bits (79), Expect = 0.18 Identities = 34/111 (30%), Positives = 38/111 (34%), Gaps = 8/111 (7%) Query: 53 DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112 DSG G R PP GP PGPPG P P PP G GP G Sbjct: 542 DSGATGLPGRPGPP--GP-PGPPGEN-----GFPGQMGIRGLPGIKGPPGALGLRGPKGD 593 Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163 G+ G G G+ +G G G R PGV + G Sbjct: 594 LGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPG 644 Score = 34.7 bits (78), Expect = 0.24 Identities = 51/201 (25%), Positives = 65/201 (32%), Gaps = 49/201 (24%) Query: 9 PPPP-------DADPANEPPPPGPMPPAPRRG--------GGVGVGGGGTGVGGGDRDRD 53 P PP D EP P G + G G +G+ G G Sbjct: 411 PGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGL 470 Query: 54 SGVVGAR-------PRASPPPQGPLPGPPGALHRWALAVPPG------------------ 88 G G+R PR P P+G + G GA + PPG Sbjct: 471 RGPEGSRGLPGVEGPRGPPGPRG-VQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQE 529 Query: 89 -----AVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141 A + RP + P GP GP G PG+ G+ + G GA+G+ G Sbjct: 530 HFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRG 589 Query: 142 CCSGPGHSKRRRQAPGVGAVG 162 G K R PG G G Sbjct: 590 -PKGDLGEKGERGPPGRGPNG 609 Score = 33.1 bits (74), Expect = 0.70 Identities = 41/137 (29%), Positives = 44/137 (32%), Gaps = 24/137 (17%) Query: 12 PDADPANEPPPPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70 PD+ P PGP PP P G G G G+ G PP Sbjct: 541 PDSGATGLPGRPGPPGPPGPP---------GENGFPG-----QMGIRGLPGIKGPPGALG 586 Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG----GGPGDALGAAAAGVGA 126 L GP G L PPG R P G PG PG G G GV Sbjct: 587 LRGPKGDLGEKGERGPPG-----RGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAG 641 Query: 127 AGVVVGVGGAVGVGGCC 143 V G G G+ G C Sbjct: 642 IPGVPGPPGPPGLPGFC 658 >gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 preproprotein [Homo sapiens] Length = 331 Score = 55.5 bits (132), Expect = 1e-07 Identities = 44/133 (33%), Positives = 49/133 (36%), Gaps = 17/133 (12%) Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65 K + PPP D + P P P P GG G G G G +P+ P Sbjct: 137 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GKKPQGPP 194 Query: 66 PPQGPLPGPPGALHRWALAVPPGAVAGPRPQ-----QASPPPCGGPGGP---GGG----- 112 PP P PP + PPG GP PQ Q PPP G P GP GG Sbjct: 195 PPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 254 Query: 113 --PGDALGAAAAG 123 PG G A G Sbjct: 255 PPPGKPQGPPAQG 267 Score = 53.1 bits (126), Expect = 7e-07 Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTG-----VGGGDRDRDSGVVGA 59 P+ PP P PPPPG P +GG G G GD+ R Sbjct: 97 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPG 156 Query: 60 RPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQ----QASPPPCGGPGGP 109 +P+ PP G P GPP PPG GP PQ PPP G P GP Sbjct: 157 KPQGPPPQGGNQPQGPP---------PPPGKPQGPPPQGGKKPQGPPPPGKPQGP 202 Score = 52.0 bits (123), Expect = 1e-06 Identities = 38/111 (34%), Positives = 43/111 (38%), Gaps = 29/111 (26%) Query: 9 PPPPDADPANEPP-----PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63 PPPP P PP P GP PP +G GD+ R +P+ Sbjct: 50 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ----------GDKSRSPRSPPGKPQG 99 Query: 64 SPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109 PP G P GPP PPG GP PQ + PPP G P GP Sbjct: 100 PPPQGGNQPQGPPP---------PPGKPQGPPPQGGNRPQGPPPPGKPQGP 141 Score = 52.0 bits (123), Expect = 1e-06 Identities = 40/123 (32%), Positives = 47/123 (38%), Gaps = 31/123 (25%) Query: 9 PPPPDADPANEPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP 67 PPP PPPPG P P P+ GD+ R S +P+ PP Sbjct: 182 PPPQGGKKPQGPPPPGKPQGPPPQ----------------GDKSRSSQSPPGKPQGPPPQ 225 Query: 68 QGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGPGGGPGDALGAAAA 122 G P GPP PPG GP PQ + PPP G P GP G +A + Sbjct: 226 GGNQPQGPP---------PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARS 276 Query: 123 GVG 125 G Sbjct: 277 PPG 279 Score = 51.6 bits (122), Expect = 2e-06 Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 20/116 (17%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVG------GGGTGVGGGDRDRDSGVVG 58 P+ PP P PPPPG P +GG G G GG + + + Sbjct: 219 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPP 278 Query: 59 ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113 +P+ P +G P GPP PP AG PQQ PP G P GP P Sbjct: 279 GKPQGPPQQEGNNPQGPP----------PP---AGGNPQQPQAPPAGQPQGPPRPP 321 Score = 48.1 bits (113), Expect = 2e-05 Identities = 38/111 (34%), Positives = 46/111 (41%), Gaps = 8/111 (7%) Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64 P+ PP D +++ PP P P P+ GG G G G G +P+ Sbjct: 199 PQGPPPQGDKSRSSQSPPGKPQGPPPQ--GGNQPQGPPPPPGKPQGPPPQG--GNKPQGP 254 Query: 65 PPPQGPLPGPP--GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113 PPP P GPP G + PPG GP PQQ P G P GG P Sbjct: 255 PPPGKP-QGPPAQGGSKSQSARSPPGKPQGP-PQQEGNNPQGPPPPAGGNP 303 Score = 34.3 bits (77), Expect = 0.31 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 17/56 (30%) Query: 58 GARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109 G P+ PQGP P PPG GP PQ + PPP G P GP Sbjct: 38 GPSPQGGNKPQGPPP-------------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 80 Score = 32.0 bits (71), Expect = 1.6 Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 30/97 (30%) Query: 9 PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGG------------------ 40 PPPP P PP P GP PP P +GG Sbjct: 233 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNP 292 Query: 41 -GGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPP 75 G GG+ + +P+ P PPQG P P Sbjct: 293 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 329 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.132 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,944,788 Number of Sequences: 37866 Number of extensions: 2120193 Number of successful extensions: 38708 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 555 Number of HSP's successfully gapped in prelim test: 1526 Number of HSP's that attempted gapping in prelim test: 15785 Number of HSP's gapped (non-prelim): 13529 length of query: 566 length of database: 18,247,518 effective HSP length: 108 effective length of query: 458 effective length of database: 14,157,990 effective search space: 6484359420 effective search space used: 6484359420 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.