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Search of human proteins with 209977019
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
(566 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 1174 0.0
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 1174 0.0
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 1168 0.0
gi|209977067 OTU domain containing 5 isoform c [Homo sapiens] 716 0.0
gi|223941923 OTU domain containing 1 [Homo sapiens] 69 1e-11
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 67 3e-11
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 61 2e-09
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 60 4e-09
gi|73476377 LBXCOR1 homolog [Homo sapiens] 60 4e-09
gi|126352608 elastin isoform e precursor [Homo sapiens] 59 1e-08
gi|126352446 elastin isoform d precursor [Homo sapiens] 59 1e-08
gi|126352322 elastin isoform c precursor [Homo sapiens] 59 1e-08
gi|126352700 elastin isoform b precursor [Homo sapiens] 59 1e-08
gi|126352440 elastin isoform a precursor [Homo sapiens] 59 1e-08
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 59 1e-08
gi|149192871 OTU domain containing 3 [Homo sapiens] 59 2e-08
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 58 2e-08
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 58 2e-08
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 58 3e-08
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 58 3e-08
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 57 3e-08
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 57 3e-08
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 57 5e-08
gi|48762934 alpha 2 type I collagen [Homo sapiens] 56 8e-08
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 56 8e-08
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 56 8e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 56 8e-08
gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo s... 55 1e-07
gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo s... 55 1e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 55 1e-07
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 1174 bits (3038), Expect = 0.0
Identities = 566/566 (100%), Positives = 566/566 (100%)
Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR
Sbjct: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA
Sbjct: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE
Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH
Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ
Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
Query: 301 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM 360
YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM
Sbjct: 301 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM 360
Query: 361 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS 420
KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS
Sbjct: 361 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS 420
Query: 421 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA 480
QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA
Sbjct: 421 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA 480
Query: 481 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV 540
KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV
Sbjct: 481 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV 540
Query: 541 LAVSQQEYLDSMKKNKVHRDPPPDKS 566
LAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 541 LAVSQQEYLDSMKKNKVHRDPPPDKS 566
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 1174 bits (3038), Expect = 0.0
Identities = 566/566 (100%), Positives = 566/566 (100%)
Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR
Sbjct: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA
Sbjct: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE
Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH
Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ
Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
Query: 301 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM 360
YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM
Sbjct: 301 YSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLM 360
Query: 361 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS 420
KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS
Sbjct: 361 KNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPS 420
Query: 421 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA 480
QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA
Sbjct: 421 QPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALA 480
Query: 481 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV 540
KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV
Sbjct: 481 KPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDEILASV 540
Query: 541 LAVSQQEYLDSMKKNKVHRDPPPDKS 566
LAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 541 LAVSQQEYLDSMKKNKVHRDPPPDKS 566
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 1168 bits (3022), Expect = 0.0
Identities = 566/571 (99%), Positives = 566/571 (99%), Gaps = 5/571 (0%)
Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR
Sbjct: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA
Sbjct: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE
Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH
Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ
Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
Query: 301 YST-----EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 355
YST EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA
Sbjct: 301 YSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 360
Query: 356 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 415
EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ
Sbjct: 361 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 420
Query: 416 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 475
VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT
Sbjct: 421 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 480
Query: 476 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 535
VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE
Sbjct: 481 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 540
Query: 536 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 566
ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 541 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 571
>gi|209977067 OTU domain containing 5 isoform c [Homo sapiens]
Length = 349
Score = 716 bits (1847), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 218 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 277
MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN
Sbjct: 1 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 60
Query: 278 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 337
CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN
Sbjct: 61 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 120
Query: 338 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 397
KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV
Sbjct: 121 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 180
Query: 398 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 457
ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP
Sbjct: 181 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 240
Query: 458 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 517
EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL
Sbjct: 241 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 300
Query: 518 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 566
IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 301 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 349
>gi|223941923 OTU domain containing 1 [Homo sapiens]
Length = 481
Score = 68.9 bits (167), Expect = 1e-11
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 102 PCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
P PG P GPG A G G G G C PG RR P A
Sbjct: 210 PAATPGSPDPGPGPWGEEHLAERGPRGWERG-------GDRCDAPGGDAARRPDPEAEAP 262
Query: 162 GGGSPEREEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKED 221
GS E A A+ A VE+Q+ + + R+K F I D
Sbjct: 263 PAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQDKYLRQ--RNKYRFHIIP---D 317
Query: 222 GACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGN 281
G CL+RAV+ VYGDQ +H +R+ + Y+ + D+FS + D +I ++
Sbjct: 318 GNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAG 377
Query: 282 HIEMQAMAEMYNRPVEVY---QYSTEPINT---FHGIHQNEDEPIRVSYHRNIHYNSV 333
+ E+ AM +M N + + + + ++T + G + I +S+ N HY++V
Sbjct: 378 YPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAV 435
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 67.4 bits (163), Expect = 3e-11
Identities = 65/181 (35%), Positives = 71/181 (39%), Gaps = 18/181 (9%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
P K P DA + PPGP PA G G VG G G +G GA R
Sbjct: 823 PGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGR 882
Query: 63 ASPP-PQGPL--PGPPGALHRWALAVPPGAVAGP--RPQQASPPPCGGPGGPGGGPGDAL 117
PP P G PGPPG + P G GP RP + PP GP G G PG
Sbjct: 883 VGPPGPSGNAGPPGPPGPAGKEGGKGPRGET-GPAGRPGEVGPPGPPGPAGEKGSPGADG 941
Query: 118 GAAAAGV-GAAGV-----VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171
A A G G G+ VVG+ G G G PG S PG G S ER
Sbjct: 942 PAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGE----PGKQGPSGASGERGPP 997
Query: 172 G 172
G
Sbjct: 998 G 998
Score = 57.4 bits (137), Expect = 3e-08
Identities = 53/151 (35%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 5 PKKKPPPPDADPANEPPPPGPM--PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-P 61
P + P P P P G P AP G G G VG +G G R
Sbjct: 412 PGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGA 471
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRP---QQASPPPCGGPGGPGGGPGDA 116
R P P G LPGPPG PGA VAGP+ ++ SP GP GP G PG+A
Sbjct: 472 RGEPGPTG-LPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSP----GPAGPKGSPGEA 526
Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
AG+ A + G G+ G G PG
Sbjct: 527 GRPGEAGLPGAKGLTGSPGSPGPDGKTGPPG 557
Score = 55.5 bits (132), Expect = 1e-07
Identities = 50/158 (31%), Positives = 56/158 (35%), Gaps = 3/158 (1%)
Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68
PP D P P P PP P G+G G D G+ P P+
Sbjct: 128 PPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPR 187
Query: 69 GPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAG 128
G LPGPPGA PPG P + P GP GP G GD A G
Sbjct: 188 G-LPGPPGAPGPQGFQGPPGEPG--EPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER 244
Query: 129 VVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
G GA G+ G PG R + GA G P
Sbjct: 245 GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 282
Score = 54.7 bits (130), Expect = 2e-07
Identities = 58/178 (32%), Positives = 65/178 (36%), Gaps = 35/178 (19%)
Query: 19 EPPPPGPMPPA-----PRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPPPQGPL 71
EP PPGP A P G G G G G+ G G GAR + P G
Sbjct: 372 EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP-----GFPGARGPSGPQGPGGP 426
Query: 72 PGP---------PGALHRWALAVPPGAVA-----------GPRPQQASPPPCGGPGGPG- 110
PGP PG+ PG V G R + P P G PG PG
Sbjct: 427 PGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGE 486
Query: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166
GGPG A GV G G+ G G PG + R +A GA G GSP
Sbjct: 487 RGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP 544
Score = 54.7 bits (130), Expect = 2e-07
Identities = 59/172 (34%), Positives = 62/172 (36%), Gaps = 16/172 (9%)
Query: 9 PPPPDADPAN-----EPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
PP P + EP P G P PP R G G G GV G G G R
Sbjct: 459 PPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAG-----PKGPAGER-- 511
Query: 63 ASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122
SP P GP G PG R A PGA G SP P G G PG D
Sbjct: 512 GSPGPAGP-KGSPGEAGRPGEAGLPGA-KGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPG 569
Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
GA G GV G G G PG + R GAVG + E G
Sbjct: 570 PPGARG-QAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQG 620
Score = 53.9 bits (128), Expect = 4e-07
Identities = 60/183 (32%), Positives = 65/183 (35%), Gaps = 25/183 (13%)
Query: 9 PPPPDADPAN--EPPPPGPMPPAPRRG-----------GGVGVGGGGTGVGGGDRDRDSG 55
PP P P + E P GP P RG G G G G + G
Sbjct: 771 PPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPG 830
Query: 56 VVGARPRASPP-PQGPL--PGP------PGALHRWALAVPPGAVAGP-RPQQASPPPCGG 105
GA+ A PP P GP PGP PGA A PPGA P + PP G
Sbjct: 831 DAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSG 890
Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGG 164
GP G PG A G G G VG G GP K A G GA G
Sbjct: 891 NAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPG-PPGPAGEKGSPGADGPAGAPGTP 949
Query: 165 SPE 167
P+
Sbjct: 950 GPQ 952
Score = 51.6 bits (122), Expect = 2e-06
Identities = 57/186 (30%), Positives = 68/186 (36%), Gaps = 34/186 (18%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
P K PP PA + PGP P RG +G G G+ + A R
Sbjct: 549 PDGKTGPP--GPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGK------AGERGV 600
Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG-----GPGGGPGDALGA 119
P P G + GP G PPG AGP ++ P G PG GP G PG+A
Sbjct: 601 PGPPGAV-GPAGKDGEAGAQGPPGP-AGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKP 658
Query: 120 AAAGV----GAAGV--------------VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
GV GA G V G G G G PG+ + A GA
Sbjct: 659 GEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAP 718
Query: 162 GG-GSP 166
G G+P
Sbjct: 719 GSQGAP 724
Score = 51.6 bits (122), Expect = 2e-06
Identities = 63/213 (29%), Positives = 75/213 (35%), Gaps = 50/213 (23%)
Query: 7 KKPPPPDADPANEPPPPGPMP----------PAPR-------RGGGVGVGGGGTGVGGGD 49
K PP A P PPGP P P+ + G GV G VG
Sbjct: 552 KTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAG 611
Query: 50 RDRDSGVVG----ARPRASPPPQGP--------LP---GPPGALHRWALAVPPGAVAGPR 94
+D ++G G A P QGP LP GPPG + PG + P
Sbjct: 612 KDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG 671
Query: 95 PQQA-------------SPPPCGGPGGPGGGPGD--ALG-AAAAGVGAAGVVVGVGGAVG 138
P A PP GP G G PG+ A G A A G + G+ G G
Sbjct: 672 PSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPG 731
Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171
G PG R A GA GSP ++ V
Sbjct: 732 ERGAAGLPGPKGDRGDAGPKGA--DGSPGKDGV 762
Score = 51.2 bits (121), Expect = 2e-06
Identities = 67/208 (32%), Positives = 74/208 (35%), Gaps = 39/208 (18%)
Query: 5 PKKKPPPPDADPA----------NEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDR 52
PK +P P + A E PG PA RG G G G G
Sbjct: 285 PKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPG 344
Query: 53 DSGVVGAR-------PRASPPPQGPL--PGPPGALHRWALAVPPGAVAGP-------RPQ 96
G VGA+ PR S PQG PGPPG A PGA P P
Sbjct: 345 FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPG 404
Query: 97 QASPP-------PCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
A P P G GPGGP G G++ A G G G VGV G GP
Sbjct: 405 IAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQG-PPGPA 463
Query: 148 HSKRRRQAPG-VGAVGGGSPEREEVGAG 174
+ +R A G G G P E G G
Sbjct: 464 GEEGKRGARGEPGPTGLPGPPGERGGPG 491
Score = 51.2 bits (121), Expect = 2e-06
Identities = 55/188 (29%), Positives = 60/188 (31%), Gaps = 28/188 (14%)
Query: 10 PPPDADPANEPP--------PPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGA 59
P P +P + P PPGPM P G G G G G RD G G
Sbjct: 976 PGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGD 1035
Query: 60 RPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--------GPGGPGG 111
R P PG PGA V P +G R + P G GP GP G
Sbjct: 1036 RGETGPAGPPGAPGAPGA----PGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQG 1091
Query: 112 GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171
GD G G G G G PG Q P GA G P
Sbjct: 1092 PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPG-----EQGPS-GASGPAGPRGPPG 1145
Query: 172 GAGYNSED 179
AG +D
Sbjct: 1146 SAGAPGKD 1153
Score = 50.4 bits (119), Expect = 4e-06
Identities = 56/181 (30%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 4 LPKKKPPPPDADPANEPPPPG---------PM-PPAPRRGGGVGVGGGGTGVGGGDRDRD 53
LP K DA P PG P+ PP P G G +G G R
Sbjct: 738 LPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGAR- 796
Query: 54 SGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--GPGGPGG 111
G G R PP GPPGA + PG AG + P P G GP GP G
Sbjct: 797 -GAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGD-AGAKGDAGPPGPAGPAGPPGPIG 854
Query: 112 GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171
G A G G GA G G GP + PG GG R E
Sbjct: 855 NVGAPGAKGARGSAGPPGATGFPGAAGRVG-PPGPSGNAGPPGPPGPAGKEGGKGPRGET 913
Query: 172 G 172
G
Sbjct: 914 G 914
Score = 50.1 bits (118), Expect = 6e-06
Identities = 59/182 (32%), Positives = 66/182 (36%), Gaps = 28/182 (15%)
Query: 5 PKKKPPPPDA-------DPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSG 55
P+ P PP A P EP PG P RG G G G G R + G
Sbjct: 186 PRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERG 245
Query: 56 VVGARPRASPPPQGPLPGPPGALHRWAL----AVPPGAVAGPRPQQASPPPCGGPG--GP 109
G + P LPG G HR A AGP+ + SP G PG GP
Sbjct: 246 PPGPQGARGLPGTAGLPGMKG--HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP 303
Query: 110 GGGPGDALGAAAAG-VGAAG--VVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGGS 165
G PG+ A G GA G G G G G PG PG VGA G
Sbjct: 304 RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGF-------PGAVGAKGEAG 356
Query: 166 PE 167
P+
Sbjct: 357 PQ 358
Score = 46.6 bits (109), Expect = 6e-05
Identities = 54/200 (27%), Positives = 64/200 (32%), Gaps = 27/200 (13%)
Query: 22 PPGPMPP-----APRRGGGVGVGG--------GGTGVGGGDRDRDS----GVVGARPRAS 64
PPGP P AP G G G G G+ G +R + G G R A
Sbjct: 690 PPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAG 749
Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPP-----PCGGPGGPG-----GGPG 114
P PG G PPG P + S P P G G PG G PG
Sbjct: 750 PKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPG 809
Query: 115 DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
A A G G G G G PG + +G VG + AG
Sbjct: 810 PAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAG 869
Query: 175 YNSEDEYEAAAARIEAMDPA 194
+ AA R+ P+
Sbjct: 870 PPGATGFPGAAGRVGPPGPS 889
Score = 40.4 bits (93), Expect = 0.004
Identities = 52/179 (29%), Positives = 63/179 (35%), Gaps = 17/179 (9%)
Query: 16 PANEPPPPGPMPP--APRRGGGVGVGG--GGTGVGG--GDRDRDSGVVGARPRASPPPQG 69
PA E PGP P +P G G G G G+ G G D P G
Sbjct: 507 PAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPG 566
Query: 70 PLPGPPGALHRWALAVPPGAV-AGPRPQQASPPPCGGPGGPGGGPGDALGAAAAG----V 124
P PGPPGA + + PG A P +A GP G G G A A G
Sbjct: 567 P-PGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPA 625
Query: 125 GAAGV-----VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178
G AG G G G+ G PG + + + G +G P G+ E
Sbjct: 626 GPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGE 684
Score = 40.0 bits (92), Expect = 0.006
Identities = 48/149 (32%), Positives = 55/149 (36%), Gaps = 47/149 (31%)
Query: 11 PPDADPANEPPPPGPMPPAPRRG-----GGVGVGG-----GGTGVGG-----GDRDR--- 52
PP A A P PGP+ PA + G G G G G G G GD+
Sbjct: 1044 PPGAPGA--PGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGE 1101
Query: 53 --DSGVVGAR----------PRASPPPQGPL-----------PGPPGALHRWALAVPPGA 89
D G+ G R P SP QGP PG GA + L PG
Sbjct: 1102 QGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGP 1161
Query: 90 VA--GPRPQQASPPPCGGPG--GPGGGPG 114
+ GPR + P G PG GP G PG
Sbjct: 1162 IGPPGPRGRTGDAGPVGPPGPPGPPGPPG 1190
Score = 38.9 bits (89), Expect = 0.013
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 9 PPPPDADPANEPP-----PPGPMPP-----APRRGGGVGVGGGGTGVGGGDRDRDSGVVG 58
PP P P + P P GP P AP + G G+ G G R D+G VG
Sbjct: 1119 PPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVG 1178
Query: 59 ARPRASPPPQGPLPGPPGA 77
P P P GP PGPP A
Sbjct: 1179 --PPGPPGPPGP-PGPPSA 1194
Score = 36.6 bits (83), Expect = 0.063
Identities = 43/132 (32%), Positives = 47/132 (35%), Gaps = 27/132 (20%)
Query: 43 TGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102
TGV G D +G G R A PP + +PG PG L PPG PP
Sbjct: 108 TGVEGPKGD--TGPRGPRGPAGPPGRDGIPGQPG------LPGPPG-----------PPG 148
Query: 103 CGGPGGPGGGPGDALGAAAAGVGAAGV-VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
GP G GG L G+ V G G G G PG APG
Sbjct: 149 PPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPG-------APGPQGF 201
Query: 162 GGGSPEREEVGA 173
G E E GA
Sbjct: 202 QGPPGEPGEPGA 213
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 61.2 bits (147), Expect = 2e-09
Identities = 60/217 (27%), Positives = 76/217 (35%), Gaps = 49/217 (22%)
Query: 6 KKKPPPPDADPANEPPPPGP----------MPPAPRRGGGVGV----GGGGTGVGGGDRD 51
+++ PPP P +PPP P PP P + V G GVG
Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPA 127
Query: 52 RDSGVVGARPRASPPP---QGPLPGPPGALHRWALAVPPGA----------------VAG 92
S P + PP GP P PP A+ + PPGA G
Sbjct: 128 SSSAPPATPPTSGAPPGSGPGPTPTPPPAV----TSAPPGAPPPTPPSSGVPTTPPQAGG 183
Query: 93 PRPQQASPPPCG-------GPGGPGGG--PGDALGAAAAGVGAAG---VVVGVGGAVGVG 140
P P A+ P G GPGGP GG PG G+ G GG G
Sbjct: 184 PPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRG 243
Query: 141 GCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNS 177
G P + ++ Q P G GG S E+ G+ +
Sbjct: 244 GRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
Score = 36.6 bits (83), Expect = 0.063
Identities = 35/96 (36%), Positives = 40/96 (41%), Gaps = 27/96 (28%)
Query: 2 TILPKK--KPPPPDADPANEPPP---PGP-------MPPAPRRGGGVGVGGGGTGVGGGD 49
T P+ PPPP A P P P PGP MP P+ GGG G+ + GG
Sbjct: 176 TTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGL----STPGGHP 231
Query: 50 RDRDSGVVGARPRAS----PP-----PQGPLPGPPG 76
+ G G PR PP QGP PG PG
Sbjct: 232 KPPHRG--GGEPRGGRQHHPPYHQQHHQGPPPGGPG 265
Score = 33.9 bits (76), Expect = 0.41
Identities = 47/144 (32%), Positives = 49/144 (34%), Gaps = 19/144 (13%)
Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG--------PPGALHRWALA 84
GGG GGG G GG D S G + P GP PG PP H+
Sbjct: 13 GGGFHRRGGGGG-RGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQ 71
Query: 85 VPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144
PP P PQQ PPP P P V G G A GVG S
Sbjct: 72 PPP---QQPPPQQ--PPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVG---S 123
Query: 145 GPGHSKRRRQA--PGVGAVGGGSP 166
P S A P GA G P
Sbjct: 124 APPASSSAPPATPPTSGAPPGSGP 147
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 60.5 bits (145), Expect = 4e-09
Identities = 61/167 (36%), Positives = 69/167 (41%), Gaps = 27/167 (16%)
Query: 22 PPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRD----SGVVGARPRASPP-PQGP-- 70
PPG P P P+ G GG G G +R +G G R A PP P+G
Sbjct: 649 PPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKG 708
Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GGPGDALGAAAAGVGAAG 128
GPPG PPGA AG Q P GG G PG G G+ G A GV
Sbjct: 709 AAGPPG---------PPGA-AGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKD 758
Query: 129 VVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP-EREEVG 172
G G +G G PG K APG+ + G GSP ER E G
Sbjct: 759 GPRGPTGPIGPPGPAGQPG-DKGEGGAPGLPGIAGPRGSPGERGETG 804
Score = 57.8 bits (138), Expect = 3e-08
Identities = 50/158 (31%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69
PP A P P GP P +G GG G +G GAR PP
Sbjct: 838 PPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGA----------AGFPGARGLPGPPGSN 887
Query: 70 PLPGPPGALHRWALAVPPGAVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAA 127
PGPPG PPG P +P P GP G G PG+ A G A
Sbjct: 888 GNPGPPGPSGSPGKDGPPG----PAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGA 943
Query: 128 GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165
+G+ G G G PG R +PG V G S
Sbjct: 944 PGPLGIAGITGARGLAGPPG-MPGPRGSPGPQGVKGES 980
Score = 55.8 bits (133), Expect = 1e-07
Identities = 53/162 (32%), Positives = 60/162 (37%), Gaps = 14/162 (8%)
Query: 23 PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHR 80
PGPM P AP G G+ G G G D R S P PP PG PGA
Sbjct: 296 PGPMGPRGAPGERGRPGLPGAA-GARGNDGARGSDGQPGPP--GPPGTAGFPGSPGAKGE 352
Query: 81 WALAVPPGAVAGPRPQQASPPPCG--------GPGGPGGGPGDALGAAAAGVGAAGVVVG 132
A PG+ P Q+ P P G GP G G PG AG+ A ++G
Sbjct: 353 VGPAGSPGSNGAP-GQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMG 411
Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
G G G PG + GA G P E AG
Sbjct: 412 ARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAG 453
Score = 53.9 bits (128), Expect = 4e-07
Identities = 54/174 (31%), Positives = 61/174 (35%), Gaps = 23/174 (13%)
Query: 8 KPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP- 65
KP PP + + P PPGP P + G G G G G G P+ P
Sbjct: 550 KPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPG 609
Query: 66 -----PPQGPLPGPPGALHRWALAVPPG--------AVAGPRPQQASPPPCGGPGGPGGG 112
PQGP PGP G PPG GP P + P GP G G
Sbjct: 610 KNGETGPQGP-PGPTGPGGDKGDTGPPGPQGLQGLPGTGGP-PGENGKPGEPGPKGDAGA 667
Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
PG G AG G+ GA G+ G PG G GA G P
Sbjct: 668 PGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPG------PEGGKGAAGPPGP 715
Score = 52.8 bits (125), Expect = 9e-07
Identities = 59/194 (30%), Positives = 70/194 (36%), Gaps = 27/194 (13%)
Query: 19 EPPPPGP-----MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
+P PPGP P +P G VG G G + + G G PP + G
Sbjct: 331 QPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGING 390
Query: 74 PPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GGPGDALGAAAAGV------- 124
PG A PGA G + P P G G PG GG G+ A G
Sbjct: 391 SPGGKGEMGPAGIPGA-PGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGER 449
Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG----AGYNSEDE 180
G AG + GV GA G G PG PG + G + ER G AG N
Sbjct: 450 GEAG-IPGVPGAKGEDGKDGSPGE-------PGANGLPGAAGERGAPGFRGPAGPNGIPG 501
Query: 181 YEAAAARIEAMDPA 194
+ A A PA
Sbjct: 502 EKGPAGERGAPGPA 515
Score = 52.4 bits (124), Expect = 1e-06
Identities = 59/177 (33%), Positives = 65/177 (36%), Gaps = 26/177 (14%)
Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA--------- 59
PP P+ PPGP P A G G+ G G+G D G G
Sbjct: 700 PPGPEGGKG-AAGPPGP-PGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGK 757
Query: 60 -RPRASPPPQGPLPGPPGALHRWALAVPPG--AVAGP------RPQQASPPPCGGPGGPG 110
PR P GP PGP G PG +AGP R + P P G PG PG
Sbjct: 758 DGPRGPTGPIGP-PGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPG 816
Query: 111 --GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAP-GVGAVG 162
G PG A G G GV G G G PG K R +P G GA G
Sbjct: 817 QNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAG 873
Score = 51.2 bits (121), Expect = 2e-06
Identities = 55/171 (32%), Positives = 65/171 (38%), Gaps = 18/171 (10%)
Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRA 63
P PP ++ P PPGP +P + G G G G GV G D P A
Sbjct: 881 PGPPGSNG--NPGPPGP-SGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937
Query: 64 SPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122
PP P P G G LA PPG + GPR SP P G G G + L
Sbjct: 938 QGPPGAPGPLGIAGITGARGLAGPPG-MPGPR---GSPGPQGVKGESGKPGANGLSGERG 993
Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173
G G + G+ G G G PG PG GG +R E G+
Sbjct: 994 PPGPQG-LPGLAGTAGEPGRDGNPGSD----GLPGRDGSPGGKGDRGENGS 1039
Score = 50.4 bits (119), Expect = 4e-06
Identities = 50/144 (34%), Positives = 57/144 (39%), Gaps = 25/144 (17%)
Query: 14 ADPANEPPP------PGPMPPAPRRG-----GGVGVGG-----GGTGVGGGDRDR-DSGV 56
A PA P P PGP P +G G G+ G G G G G
Sbjct: 1070 AGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGA 1129
Query: 57 VG----ARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG- 111
+G A PR P GP PG G PPG G R ++ S G PG PG
Sbjct: 1130 IGSPGPAGPRGPVGPSGP-PGKDGTSGHPGPIGPPGP-RGNRGERGSEGSPGHPGQPGPP 1187
Query: 112 GPGDALGAAAAGVGAAGVVVGVGG 135
GP A G GVGAA + G+GG
Sbjct: 1188 GPPGAPGPCCGGVGAAAI-AGIGG 1210
Score = 50.1 bits (118), Expect = 6e-06
Identities = 51/152 (33%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 6 KKKPPPPDAD--PANEPP--PPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
K +P P AD P + P P GP+ PP P G GG G+ G R G G R
Sbjct: 743 KGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPR--GSPGER 800
Query: 61 PRASPPPQGPLPGPPGALH----RWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-D 115
PP PG PG + P G P A PP GP GP G G
Sbjct: 801 GETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVK 860
Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
+ G GAAG G G G G PG
Sbjct: 861 GERGSPGGPGAAG-FPGARGLPGPPGSNGNPG 891
Score = 48.5 bits (114), Expect = 2e-05
Identities = 52/173 (30%), Positives = 61/173 (35%), Gaps = 14/173 (8%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGARP 61
P P P A PP P AP GG G G G G G +R ++G+ G
Sbjct: 400 PAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPG 459
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121
+ PG PGA PGA AG R P GP GP G PG+ A
Sbjct: 460 AKGEDGKDGSPGEPGANGL------PGA-AGER----GAPGFRGPAGPNGIPGEKGPAGE 508
Query: 122 AGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
G G G G G GPG G G+ G P + +G
Sbjct: 509 RGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESG 561
Score = 48.1 bits (113), Expect = 2e-05
Identities = 48/157 (30%), Positives = 54/157 (34%), Gaps = 16/157 (10%)
Query: 20 PPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRD----SGVVGARPRASPPPQGPLPG 73
P PGP P P + G G G G TG GG D G+ G PP + PG
Sbjct: 599 PGGPGPQGP-PGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPG 657
Query: 74 PPGALHRWALAVPPGAVA--------GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVG 125
PG PG GP P A P G GP G G A G
Sbjct: 658 EPGPKGDAGAPGAPGGKGDAGAPGERGP-PGLAGAPGLRGGAGPPGPEGGKGAAGPPGPP 716
Query: 126 AAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
A G+ G G G PG + + G GA G
Sbjct: 717 GAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADG 753
Score = 47.8 bits (112), Expect = 3e-05
Identities = 50/169 (29%), Positives = 54/169 (31%), Gaps = 15/169 (8%)
Query: 4 LPKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARP 61
LP P E PPGP P AP + G G G G GV G P
Sbjct: 787 LPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAG--P 844
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG----GPGGPGGGPGDAL 117
P GP PGP G PGA P + PP GP GP G PG
Sbjct: 845 PGGSGPAGP-PGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDG 903
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
AG G G+ GV G G + G G P
Sbjct: 904 PPGPAGN------TGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGP 946
Score = 47.4 bits (111), Expect = 4e-05
Identities = 51/171 (29%), Positives = 61/171 (35%), Gaps = 15/171 (8%)
Query: 17 ANEPPPPGPM--------PPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRAS-- 64
+ E PPGP P R G G G G G GG DR P A
Sbjct: 989 SGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGH 1048
Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGV 124
P P GP+ GP G + P G P P + P GP GP G G+ AAG+
Sbjct: 1049 PGPPGPV-GPAGKSGDRGESGPAGPAGAPGPAGSRGAP--GPQGPRGDKGETGERGAAGI 1105
Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175
G GA G G G A G VG P ++ +G+
Sbjct: 1106 KGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGH 1156
Score = 41.6 bits (96), Expect = 0.002
Identities = 49/187 (26%), Positives = 57/187 (30%), Gaps = 33/187 (17%)
Query: 9 PPPPDADPANEPPPPGPMPPA----PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
PP P P P P P P G G G G +G G R
Sbjct: 178 PPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPG 237
Query: 65 PPPQGPLPGPPGALHRWALAVPPG-----------------AVAGPRPQQASPPPCGGPG 107
P + LPGPPG + PG G + + P G PG
Sbjct: 238 RPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPG 297
Query: 108 --GPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165
GP G PG+ G+ A G GA G G PG PG G
Sbjct: 298 PMGPRGAPGE---RGRPGLPGAAGARGNDGARGSDGQPGPPG-------PPGTAGFPGSP 347
Query: 166 PEREEVG 172
+ EVG
Sbjct: 348 GAKGEVG 354
Score = 37.4 bits (85), Expect = 0.037
Identities = 44/162 (27%), Positives = 52/162 (32%), Gaps = 9/162 (5%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69
P + A P PG + G G G G+R A P P +G
Sbjct: 445 PRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKG 504
Query: 70 PLP--GPPGALHRWALAVPPG--AVAGPRPQQASPPPCGGPG-----GPGGGPGDALGAA 120
P G PG A PG V G + P GGPG GP G G++
Sbjct: 505 PAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPG 564
Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
G GV G G G PG + R G G G
Sbjct: 565 PPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQG 606
Score = 36.2 bits (82), Expect = 0.082
Identities = 50/172 (29%), Positives = 57/172 (33%), Gaps = 25/172 (14%)
Query: 8 KPPPPDADPANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
+PP P N P GP P P R G G+ G G G G
Sbjct: 90 QPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGS------PGPPGICES 143
Query: 63 ASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122
PQ P + +AV G +AG P A PP GP G G PG
Sbjct: 144 CPTGPQNYSPQYDSYDVKSGVAV--GGLAG-YPGPAGPPGPPGPPGTSGHPGSPGSPGYQ 200
Query: 123 G----VGAAGV--VVGVGGAVGVGGCCSGPGHSKR-----RRQAPGVGAVGG 163
G G AG G GA+G G G S R R PG + G
Sbjct: 201 GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKG 252
Score = 32.0 bits (71), Expect = 1.6
Identities = 46/171 (26%), Positives = 58/171 (33%), Gaps = 30/171 (17%)
Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68
P PP A PP G P P+ G G+ G R+ D G+ G P
Sbjct: 89 PQPPTAPTR---PPNGQGPQGPKGDPGP------PGIPG--RNGDPGIPGQ------PGS 131
Query: 69 GPLPGPPGALHRWALAVPPGAVAGPR---PQQASPPPCGGP--GGPGGGPGDALGAAAAG 123
PGPPG + GP+ PQ S G GG G PG A G
Sbjct: 132 PGSPGPPG--------ICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPG 183
Query: 124 VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
G G+ G G PG + GA+G P ++ +G
Sbjct: 184 PPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESG 234
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 60.5 bits (145), Expect = 4e-09
Identities = 55/171 (32%), Positives = 64/171 (37%), Gaps = 22/171 (12%)
Query: 9 PPPPDADPANEPP---PPGPMPPAPRRGGGVGVGGGGT----GVGGGDRDRDSGVVGARP 61
PPP + E PPGP PP P+RG G+ G G G GGG R V+
Sbjct: 276 PPPHKSLRCGEDEAAGPPGPPPPHPQRGLGLATGASGPAGPGGPGGGAGVRSYPVIPVPS 335
Query: 62 RAS------PPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG 114
+ PPP P P G P A P AG P GGPG GG G
Sbjct: 336 KGFGLLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGE--------PKGGPGTGSGGGG 387
Query: 115 DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165
G A G GA+ + G G G G G S + A V A +
Sbjct: 388 AGTGGGAGGPGASHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAA 438
Score = 39.7 bits (91), Expect = 0.007
Identities = 45/169 (26%), Positives = 52/169 (30%), Gaps = 4/169 (2%)
Query: 4 LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
L +K PPP P P G P G G GG G G G +G P A
Sbjct: 340 LLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGEPKGGPGTGSGGGGAGTGGGAGGPGA 399
Query: 64 SPPPQGPLPGPPGALHRW----ALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGA 119
S P G GP G W + A A A+ P P G
Sbjct: 400 SHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAATVYPTFPMFWPAAGSLPVPSY 459
Query: 120 AAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPER 168
AA A V V A +G G + A G G+ ER
Sbjct: 460 PAAQSQAKAVAAAVAAAAAAAAAAAGSGAPEPLDGAEPAKESGLGAEER 508
Score = 32.7 bits (73), Expect = 0.91
Identities = 30/112 (26%), Positives = 35/112 (31%), Gaps = 26/112 (23%)
Query: 12 PDADPANEPPPPGPMPPAPRRGGGVG-------VGGGGTGVGGGDRDRDSGVVGARPRAS 64
PD + A E P AP GGG +G G D G R R
Sbjct: 625 PDDEDAQEETEPS----APSAGGGPDGEQPTGPPSATSSGADGPANSPDGGSPRPRRRLG 680
Query: 65 PPPQG---------------PLPGPPGALHRWALAVPPGAVAGPRPQQASPP 101
PPP G P PP + L P G + GP P + P
Sbjct: 681 PPPAGRPAFGDLAAEDLVRRPERSPPSGGGGYELREPCGPLGGPAPAKVFAP 732
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 58.9 bits (141), Expect = 1e-08
Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
P P G +P P G GV GVGG +G+ G P P P PL P
Sbjct: 156 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 208
Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
P + PG VAG + G P G G GP A AAA
Sbjct: 209 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 262
Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
G GAAGV+ GVGGA GV G PG PG+G + G G+P A
Sbjct: 263 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 312
Query: 178 EDEYEAAAARI 188
+Y AAA +
Sbjct: 313 AAKYGAAAGLV 323
Score = 55.8 bits (133), Expect = 1e-07
Identities = 54/149 (36%), Positives = 63/149 (42%), Gaps = 25/149 (16%)
Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
G GVGVG G GVG +GV G A P G +PG A ++ AVP G +
Sbjct: 533 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 584
Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
G GG G PGG G G A AAAA A G+ GA G+GG G
Sbjct: 585 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 635
Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGYNS 177
PGVG +GG P A Y +
Sbjct: 636 ----LGVPGVGGLGGIPPAAAAKAAKYGA 660
Score = 48.1 bits (113), Expect = 2e-05
Identities = 54/161 (33%), Positives = 60/161 (37%), Gaps = 33/161 (20%)
Query: 21 PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70
P P+ P P G G+G G G V GG D + A+ A G
Sbjct: 58 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG---LGG 114
Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA-G 128
+PG G L V GAV P G G PG PG L GA GVG G
Sbjct: 115 VPGVGG------LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 168
Query: 129 VVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
V G G A GVGG +G PGVG GG P
Sbjct: 169 VPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 200
Score = 46.6 bits (109), Expect = 6e-05
Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%)
Query: 29 APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88
A + G G+ GG G G G GV GA P +P PGA +P
Sbjct: 313 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 362
Query: 89 AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144
AV G +A+ G PG +G GVGA G VGVGG GV G
Sbjct: 363 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 422
Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173
G PGVG V G SPE + A
Sbjct: 423 VGG-------VPGVGGVPGVGISPEAQAAAA 446
Score = 43.1 bits (100), Expect = 7e-04
Identities = 53/148 (35%), Positives = 57/148 (38%), Gaps = 27/148 (18%)
Query: 20 PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGA 77
P PG +P A G GGV G G G GG G +G P PL PG
Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG------GALG-------PGGKPLKPVPGG 69
Query: 78 LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGG 135
L L GA G P P G PGG A AA AG G G V GVGG
Sbjct: 70 LAGAGL----GAGLGAFPAVTFP----GALVPGGVADAAAAYKAAKAGAGLGG-VPGVGG 120
Query: 136 -AVGVGGCCSGPGHSKRRRQAPGVGAVG 162
V G PG + + PGVG G
Sbjct: 121 LGVSAGAVVPQPGAGVKPGKVPGVGLPG 148
Score = 42.7 bits (99), Expect = 9e-04
Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%)
Query: 35 GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91
GVG GG G GVGG GV G P G +PG + A A A
Sbjct: 398 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 452
Query: 92 GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147
G P P G G G PG L A GVG A GV GVG A G+G G +
Sbjct: 453 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 509
Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
S + R A G+GA VG G P VGAG
Sbjct: 510 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 548
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)
Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
G G G TG G G + + A + G LPG GA VP PGA+
Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 290
Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
G P A+ PGGPG GPG G GV AG
Sbjct: 291 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 350
Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
+ V G+ GA V G S +K +A GA VG G VGAG
Sbjct: 351 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 402
Score = 37.7 bits (86), Expect = 0.028
Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%)
Query: 33 GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78
G GVGVGG G GVGG S A A G +PG PG
Sbjct: 406 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 465
Query: 79 HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110
+ V PG P P P G GPGG
Sbjct: 466 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 525
Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156
G PG +G G+G V G+G GV G + PG + A
Sbjct: 526 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 585
Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
G+GA+GG VGAG + AAA+
Sbjct: 586 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 616
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 58.9 bits (141), Expect = 1e-08
Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
P P G +P P G GV GVGG +G+ G P P P PL P
Sbjct: 161 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 213
Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
P + PG VAG + G P G G GP A AAA
Sbjct: 214 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 267
Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
G GAAGV+ GVGGA GV G PG PG+G + G G+P A
Sbjct: 268 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 317
Query: 178 EDEYEAAAARI 188
+Y AAA +
Sbjct: 318 AAKYGAAAGLV 328
Score = 55.5 bits (132), Expect = 1e-07
Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 18/147 (12%)
Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
G G G+ G G GVG +GV G A P G +PG A ++ AV PG +
Sbjct: 550 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV-PGVL 608
Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
G GG G PGG G G A AAAA A G+ GA G+GG G
Sbjct: 609 GG-------LGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVG--- 658
Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175
PGVG +GG P A Y
Sbjct: 659 ---GLGVPGVGGLGGIPPAAAAKAAKY 682
Score = 48.9 bits (115), Expect = 1e-05
Identities = 55/163 (33%), Positives = 60/163 (36%), Gaps = 32/163 (19%)
Query: 21 PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70
P P+ P P G G+G G G V GG D + A+ A
Sbjct: 58 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG------ 111
Query: 71 LPGPPGALHRWALAVP--PGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA 127
L G PG A P PGAV P G G PG PG L GA GVG
Sbjct: 112 LGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171
Query: 128 -GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
GV G G A GVGG +G PGVG GG P
Sbjct: 172 PGVPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 205
Score = 44.7 bits (104), Expect = 2e-04
Identities = 46/142 (32%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93
GG G G G GV G +GV G + P P G PGA ++ A A
Sbjct: 330 GGPGFGPGVVGVPG------AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAA 383
Query: 94 RPQQASPPPCGGPGG-------PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146
+ + P G GG GG PG G G+ V GVGG GVGG G
Sbjct: 384 KAAKYGARPGVGVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGG-VPGV 440
Query: 147 GHSKRRRQAPGVGAV--GGGSP 166
G S + A A G G+P
Sbjct: 441 GISPEAQAAAAAKAAKYGVGTP 462
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)
Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
G G G TG G G + + A + G LPG GA VP PGA+
Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 295
Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
G P A+ PGGPG GPG G GV AG
Sbjct: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 355
Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
+ V G+ GA V G S +K +A GA VG G VGAG
Sbjct: 356 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407
Score = 37.4 bits (85), Expect = 0.037
Identities = 59/168 (35%), Positives = 63/168 (37%), Gaps = 32/168 (19%)
Query: 33 GGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRASPPPQGPLP----GPPGALHRWAL 83
G GVGVGG G GVGG VG P A G P A A
Sbjct: 411 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAA--AK 468
Query: 84 AVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG 140
A A G P P G G G PG L A GVG A GV GVG A G+G
Sbjct: 469 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIG 525
Query: 141 -GCCSGPGHSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
G + S + R A G+GA VG G P VGAG
Sbjct: 526 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 572
Score = 37.4 bits (85), Expect = 0.037
Identities = 52/171 (30%), Positives = 63/171 (36%), Gaps = 29/171 (16%)
Query: 35 GVGVGGGGTGVGGGDRDRDSGVVGARPRAS-PPPQGPLPG---PPGALHRWALAVPPGAV 90
GVGV G GV G VG P P G PG PG A + PG V
Sbjct: 481 GVGVAPG-VGVAPG--------VGVAPGVGLAPGVGVAPGVGVAPGV--GVAPGIGPGGV 529
Query: 91 AGPRPQQA---SPPPCGGPGGPGGG-PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146
A A + G G G PG +G G+G V G+G GV G + P
Sbjct: 530 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVP 589
Query: 147 GHSKRRRQAP----------GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
G + A G+GA+GG VGAG + AAA+
Sbjct: 590 GALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 640
Score = 33.5 bits (75), Expect = 0.53
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 87 PGAVAGPRPQQASPPPCG------GPGGPGGGPGDAL--GAAAAGVGA---AGVVVGVGG 135
PGA+ G P P G G GPGG P + G A AG+GA A V G
Sbjct: 30 PGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPG 89
Query: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
A+ GG K + G+G V G
Sbjct: 90 ALVPGGVADAAAAYKAAKAGAGLGGVPG 117
Score = 30.8 bits (68), Expect = 3.5
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGV--GGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
P PGG PG G GV G +G GGA+G GG K + PG G G
Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG--------KPLKPVPG-GLAGA 73
Query: 164 G 164
G
Sbjct: 74 G 74
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 58.9 bits (141), Expect = 1e-08
Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
P P G +P P G GV GVGG +G+ G P P P PL P
Sbjct: 161 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 213
Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
P + PG VAG + G P G G GP A AAA
Sbjct: 214 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 267
Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
G GAAGV+ GVGGA GV G PG PG+G + G G+P A
Sbjct: 268 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 317
Query: 178 EDEYEAAAARI 188
+Y AAA +
Sbjct: 318 AAKYGAAAGLV 328
Score = 55.5 bits (132), Expect = 1e-07
Identities = 54/147 (36%), Positives = 62/147 (42%), Gaps = 25/147 (17%)
Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
G GVGVG G GVG +GV G A P G +PG A ++ AVP G +
Sbjct: 538 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 589
Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
G GG G PGG G G A AAAA A G+ GA G+GG G
Sbjct: 590 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 640
Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175
PGVG +GG P A Y
Sbjct: 641 ----LGVPGVGGLGGIPPAAAAKAAKY 663
Score = 48.9 bits (115), Expect = 1e-05
Identities = 55/163 (33%), Positives = 60/163 (36%), Gaps = 32/163 (19%)
Query: 21 PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70
P P+ P P G G+G G G V GG D + A+ A
Sbjct: 58 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG------ 111
Query: 71 LPGPPGALHRWALAVP--PGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA 127
L G PG A P PGAV P G G PG PG L GA GVG
Sbjct: 112 LGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171
Query: 128 -GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
GV G G A GVGG +G PGVG GG P
Sbjct: 172 PGVPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 205
Score = 46.6 bits (109), Expect = 6e-05
Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%)
Query: 29 APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88
A + G G+ GG G G G GV GA P +P PGA +P
Sbjct: 318 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 367
Query: 89 AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144
AV G +A+ G PG +G GVGA G VGVGG GV G
Sbjct: 368 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 427
Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173
G PGVG V G SPE + A
Sbjct: 428 VGG-------VPGVGGVPGVGISPEAQAAAA 451
Score = 42.7 bits (99), Expect = 9e-04
Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%)
Query: 35 GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91
GVG GG G GVGG GV G P G +PG + A A A
Sbjct: 403 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
Query: 92 GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147
G P P G G G PG L A GVG A GV GVG A G+G G +
Sbjct: 458 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 514
Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
S + R A G+GA VG G P VGAG
Sbjct: 515 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 553
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)
Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
G G G TG G G + + A + G LPG GA VP PGA+
Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 295
Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
G P A+ PGGPG GPG G GV AG
Sbjct: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 355
Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
+ V G+ GA V G S +K +A GA VG G VGAG
Sbjct: 356 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407
Score = 37.7 bits (86), Expect = 0.028
Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%)
Query: 33 GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78
G GVGVGG G GVGG S A A G +PG PG
Sbjct: 411 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 470
Query: 79 HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110
+ V PG P P P G GPGG
Sbjct: 471 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 530
Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156
G PG +G G+G V G+G GV G + PG + A
Sbjct: 531 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 590
Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
G+GA+GG VGAG + AAA+
Sbjct: 591 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 621
Score = 33.5 bits (75), Expect = 0.53
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 87 PGAVAGPRPQQASPPPCG------GPGGPGGGPGDAL--GAAAAGVGA---AGVVVGVGG 135
PGA+ G P P G G GPGG P + G A AG+GA A V G
Sbjct: 30 PGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPG 89
Query: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
A+ GG K + G+G V G
Sbjct: 90 ALVPGGVADAAAAYKAAKAGAGLGGVPG 117
Score = 30.8 bits (68), Expect = 3.5
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGV--GGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
P PGG PG G GV G +G GGA+G GG K + PG G G
Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG--------KPLKPVPG-GLAGA 73
Query: 164 G 164
G
Sbjct: 74 G 74
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 58.9 bits (141), Expect = 1e-08
Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
P P G +P P G GV GVGG +G+ G P P P PL P
Sbjct: 146 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 198
Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
P + PG VAG + G P G G GP A AAA
Sbjct: 199 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 252
Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
G GAAGV+ GVGGA GV G PG PG+G + G G+P A
Sbjct: 253 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 302
Query: 178 EDEYEAAAARI 188
+Y AAA +
Sbjct: 303 AAKYGAAAGLV 313
Score = 55.5 bits (132), Expect = 1e-07
Identities = 54/147 (36%), Positives = 62/147 (42%), Gaps = 25/147 (17%)
Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
G GVGVG G GVG +GV G A P G +PG A ++ AVP G +
Sbjct: 523 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 574
Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
G GG G PGG G G A AAAA A G+ GA G+GG G
Sbjct: 575 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 625
Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175
PGVG +GG P A Y
Sbjct: 626 ----LGVPGVGGLGGIPPAAAAKAAKY 648
Score = 48.5 bits (114), Expect = 2e-05
Identities = 59/186 (31%), Positives = 66/186 (35%), Gaps = 42/186 (22%)
Query: 5 PKKKPPPPDADPANEP---------PPPGPMPPAPRRGGGVGVGGG----------GTGV 45
P + P A P P P P+ P P G G+G G G V
Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82
Query: 46 GGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGG 105
GG D + A+ A G +PG G L V GAV P G
Sbjct: 83 PGGVADAAAAYKAAKAGAG---LGGVPGVGG------LGVSAGAVVPQPGAGVKPGKVPG 133
Query: 106 PGGPGGGPGDAL-GAAAAGVGAA-GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGA 160
G PG PG L GA GVG GV G G A GVGG +G PGVG
Sbjct: 134 VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAG---------IPGVGP 184
Query: 161 VGGGSP 166
GG P
Sbjct: 185 FGGPQP 190
Score = 46.6 bits (109), Expect = 6e-05
Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%)
Query: 29 APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88
A + G G+ GG G G G GV GA P +P PGA +P
Sbjct: 303 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 352
Query: 89 AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144
AV G +A+ G PG +G GVGA G VGVGG GV G
Sbjct: 353 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 412
Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173
G PGVG V G SPE + A
Sbjct: 413 VGG-------VPGVGGVPGVGISPEAQAAAA 436
Score = 42.7 bits (99), Expect = 9e-04
Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%)
Query: 35 GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91
GVG GG G GVGG GV G P G +PG + A A A
Sbjct: 388 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 442
Query: 92 GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147
G P P G G G PG L A GVG A GV GVG A G+G G +
Sbjct: 443 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 499
Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
S + R A G+GA VG G P VGAG
Sbjct: 500 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 538
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)
Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
G G G TG G G + + A + G LPG GA VP PGA+
Sbjct: 227 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 280
Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
G P A+ PGGPG GPG G GV AG
Sbjct: 281 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 340
Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
+ V G+ GA V G S +K +A GA VG G VGAG
Sbjct: 341 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 392
Score = 37.7 bits (86), Expect = 0.028
Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%)
Query: 33 GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78
G GVGVGG G GVGG S A A G +PG PG
Sbjct: 396 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 455
Query: 79 HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110
+ V PG P P P G GPGG
Sbjct: 456 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 515
Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156
G PG +G G+G V G+G GV G + PG + A
Sbjct: 516 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 575
Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
G+GA+GG VGAG + AAA+
Sbjct: 576 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 606
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 58.9 bits (141), Expect = 1e-08
Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
P P G +P P G GV GVGG +G+ G P P P PL P
Sbjct: 156 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 208
Query: 75 -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
P + PG VAG + G P G G GP A AAA
Sbjct: 209 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 262
Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
G GAAGV+ GVGGA GV G PG PG+G + G G+P A
Sbjct: 263 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 312
Query: 178 EDEYEAAAARI 188
+Y AAA +
Sbjct: 313 AAKYGAAAGLV 323
Score = 55.8 bits (133), Expect = 1e-07
Identities = 54/149 (36%), Positives = 63/149 (42%), Gaps = 25/149 (16%)
Query: 33 GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
G GVGVG G GVG +GV G A P G +PG A ++ AVP G +
Sbjct: 552 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 603
Query: 91 AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
G GG G PGG G G A AAAA A G+ GA G+GG G
Sbjct: 604 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 654
Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGYNS 177
PGVG +GG P A Y +
Sbjct: 655 ----LGVPGVGGLGGIPPAAAAKAAKYGA 679
Score = 48.1 bits (113), Expect = 2e-05
Identities = 54/161 (33%), Positives = 60/161 (37%), Gaps = 33/161 (20%)
Query: 21 PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70
P P+ P P G G+G G G V GG D + A+ A G
Sbjct: 58 PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG---LGG 114
Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA-G 128
+PG G L V GAV P G G PG PG L GA GVG G
Sbjct: 115 VPGVGG------LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 168
Query: 129 VVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
V G G A GVGG +G PGVG GG P
Sbjct: 169 VPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 200
Score = 44.7 bits (104), Expect = 2e-04
Identities = 46/142 (32%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93
GG G G G GV G +GV G + P P G PGA ++ A A
Sbjct: 325 GGPGFGPGVVGVPG------AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAA 378
Query: 94 RPQQASPPPCGGPGG-------PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146
+ + P G GG GG PG G G+ V GVGG GVGG G
Sbjct: 379 KAAKYGARPGVGVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGG-VPGV 435
Query: 147 GHSKRRRQAPGVGAV--GGGSP 166
G S + A A G G+P
Sbjct: 436 GISPEAQAAAAAKAAKYGVGTP 457
Score = 43.1 bits (100), Expect = 7e-04
Identities = 53/148 (35%), Positives = 57/148 (38%), Gaps = 27/148 (18%)
Query: 20 PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGA 77
P PG +P A G GGV G G G GG G +G P PL PG
Sbjct: 23 PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG------GALG-------PGGKPLKPVPGG 69
Query: 78 LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGG 135
L L GA G P P G PGG A AA AG G G V GVGG
Sbjct: 70 LAGAGL----GAGLGAFPAVTFP----GALVPGGVADAAAAYKAAKAGAGLGG-VPGVGG 120
Query: 136 -AVGVGGCCSGPGHSKRRRQAPGVGAVG 162
V G PG + + PGVG G
Sbjct: 121 LGVSAGAVVPQPGAGVKPGKVPGVGLPG 148
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)
Query: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
G G G TG G G + + A + G LPG GA VP PGA+
Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 290
Query: 92 G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
G P A+ PGGPG GPG G GV AG
Sbjct: 291 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 350
Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
+ V G+ GA V G S +K +A GA VG G VGAG
Sbjct: 351 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 402
Score = 37.4 bits (85), Expect = 0.037
Identities = 59/168 (35%), Positives = 63/168 (37%), Gaps = 32/168 (19%)
Query: 33 GGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRASPPPQGPLP----GPPGALHRWAL 83
G GVGVGG G GVGG VG P A G P A A
Sbjct: 406 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAA--AK 463
Query: 84 AVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG 140
A A G P P G G G PG L A GVG A GV GVG A G+G
Sbjct: 464 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIG 520
Query: 141 -GCCSGPGHSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
G + S + R A G+GA VG G P VGAG
Sbjct: 521 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 567
Score = 37.4 bits (85), Expect = 0.037
Identities = 52/171 (30%), Positives = 63/171 (36%), Gaps = 29/171 (16%)
Query: 35 GVGVGGGGTGVGGGDRDRDSGVVGARPRAS-PPPQGPLPG---PPGALHRWALAVPPGAV 90
GVGV G GV G VG P P G PG PG A + PG V
Sbjct: 476 GVGVAPG-VGVAPG--------VGVAPGVGLAPGVGVAPGVGVAPGV--GVAPGIGPGGV 524
Query: 91 AGPRPQQA---SPPPCGGPGGPGGG-PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146
A A + G G G PG +G G+G V G+G GV G + P
Sbjct: 525 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVP 584
Query: 147 GHSKRRRQAP----------GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
G + A G+GA+GG VGAG + AAA+
Sbjct: 585 GALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 635
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 58.9 bits (141), Expect = 1e-08
Identities = 54/183 (29%), Positives = 68/183 (37%), Gaps = 28/183 (15%)
Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
+ L ++P PP+ P P + P G G G GG G G GGG +R+ G
Sbjct: 132 LAALGGRRPGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGEREGGA---- 187
Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
PPP P G + A G G + ASP P G G G+
Sbjct: 188 --PQPPP------PRGWRGKGVRAQQRGGSGG---EGASPSPSSSSAGKTPG----TGSR 232
Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSG---PGHSKRRRQAPGVGAV------GGGSPEREEV 171
+G G AG G GG+ GC H K+ R A A GGGS R
Sbjct: 233 NSGSGVAGGGSGGGGSYWKEGCLQSELIQFHLKKERAAAAAAAAQMHAKNGGGSSSRSSP 292
Query: 172 GAG 174
+G
Sbjct: 293 VSG 295
>gi|149192871 OTU domain containing 3 [Homo sapiens]
Length = 398
Score = 58.5 bits (140), Expect = 2e-08
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 168 REEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFR 227
R E G G E+E+ + A +++A+ G ++++ DG CLFR
Sbjct: 40 RPESGGGGGCEEEFVSFANQLQAL--------------------GLKLREVPGDGNCLFR 79
Query: 228 AVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEM 285
A+ DQ+ G H R+ +DY++K + F +V +D F ++ K + +
Sbjct: 80 ALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAI 139
Query: 286 QAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSV--VNPN 337
A A + V ++Q + P+ G ++ + ++Y HY+SV +N N
Sbjct: 140 VAFARNHQLNVVIHQLNA-PLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDN 192
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 58.2 bits (139), Expect = 2e-08
Identities = 50/147 (34%), Positives = 56/147 (38%), Gaps = 37/147 (25%)
Query: 2 TILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVG-----GGDR- 50
TI+P PPP D PPPP P PP P GGV + GGT + GD
Sbjct: 585 TIIP---PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDAT 641
Query: 51 -----DRDSGVVGARPRASP-----PPQGPLPG-----PPGALHRWALAVPPGAVAGPRP 95
GV P + P PP PLPG PP + +PP P
Sbjct: 642 IPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 701
Query: 96 QQASPPPCGGPGGPG--------GGPG 114
PPP PGGPG GGPG
Sbjct: 702 AGMPPPPPPLPGGPGIPPPPPFPGGPG 728
Score = 33.1 bits (74), Expect = 0.70
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG 111
RA PP PLPG G + + PP P PPP P PGG
Sbjct: 570 RAPVPPAPPLPGDSGTI----IPPPPAPGDSTTPPPPPPPPPPPPPLPGG 615
Score = 32.0 bits (71), Expect = 1.6
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 9 PPPPDADPANEPPPPGP-MPPAPRRGGGV 36
PPP P PPPPG MPP P G GV
Sbjct: 720 PPPFPGGPGIPPPPPGMGMPPPPPFGFGV 748
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 58.2 bits (139), Expect = 2e-08
Identities = 50/147 (34%), Positives = 56/147 (38%), Gaps = 37/147 (25%)
Query: 2 TILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVG-----GGDR- 50
TI+P PPP D PPPP P PP P GGV + GGT + GD
Sbjct: 594 TIIP---PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDAT 650
Query: 51 -----DRDSGVVGARPRASP-----PPQGPLPG-----PPGALHRWALAVPPGAVAGPRP 95
GV P + P PP PLPG PP + +PP P
Sbjct: 651 IPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 710
Query: 96 QQASPPPCGGPGGPG--------GGPG 114
PPP PGGPG GGPG
Sbjct: 711 AGMPPPPPPLPGGPGIPPPPPFPGGPG 737
Score = 33.1 bits (74), Expect = 0.70
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG 111
RA PP PLPG G + + PP P PPP P PGG
Sbjct: 579 RAPVPPAPPLPGDSGTI----IPPPPAPGDSTTPPPPPPPPPPPPPLPGG 624
Score = 32.0 bits (71), Expect = 1.6
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 9 PPPPDADPANEPPPPGP-MPPAPRRGGGV 36
PPP P PPPPG MPP P G GV
Sbjct: 729 PPPFPGGPGIPPPPPGMGMPPPPPFGFGV 757
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 57.8 bits (138), Expect = 3e-08
Identities = 64/217 (29%), Positives = 71/217 (32%), Gaps = 60/217 (27%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGA--- 59
P + PP A P GP PA R G G VG+ G VG D D G +G
Sbjct: 1107 PGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQ 1166
Query: 60 ------RPRASPP----PQGPL--------------------------------PGPPGA 77
+ PP PQGP+ PGPPG
Sbjct: 1167 KGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGP 1226
Query: 78 LHRWALAVPPGAVAGPRP-QQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVVVGVGG 135
+ L PPG Q PP GP GP G PG D G+G G V G
Sbjct: 1227 VGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAV----G 1282
Query: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
G G PG PG G G ER E G
Sbjct: 1283 EKGEPGEAGEPG-------LPGEGGPPGPKGERGEKG 1312
Score = 50.8 bits (120), Expect = 3e-06
Identities = 54/175 (30%), Positives = 62/175 (35%), Gaps = 17/175 (9%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
P +P P AD P PPG M P R GG G G + + ++ A
Sbjct: 500 PPGRPGLPGADGL--PGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLAL 557
Query: 65 PPPQGPL-----PGPPGALHRWALAVPPGAVA--GPRPQQASPPPCGGPGGPGGGPGDAL 117
P GP+ PGP G L PG V GPR Q GP GP G PG
Sbjct: 558 RGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQ-------GPPGPAGKPGRRG 610
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
A + G G G G G PG K R PG G + E G
Sbjct: 611 RAGSDGARGMPGQTGPKGDRGFDGLAGLPG-EKGHRGDPGPSGPPGPPGDDGERG 664
Score = 48.9 bits (115), Expect = 1e-05
Identities = 56/173 (32%), Positives = 69/173 (39%), Gaps = 23/173 (13%)
Query: 4 LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
LP +K D P+ P PPG RG VG G G R G++G P+
Sbjct: 638 LPGEKGHRGDPGPSGPPGPPG---DDGERGDDGEVGPRGLPGEPGPR----GLLG--PKG 688
Query: 64 SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-GGPGDALGAAAA 122
P P PGPPG P G V GP+ + P G PG G GP A+G
Sbjct: 689 PPGP----PGPPGVTGMDGQPGPKGNV-GPQGEPGPPGQQGNPGAQGLPGPQGAIGPP-- 741
Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175
G G +G G G+ G PGH ++ P G GG P + GY
Sbjct: 742 --GEKG-PLGKPGLPGMPGADGPPGHP--GKEGP-PGEKGGQGPPGPQGPIGY 788
Score = 48.5 bits (114), Expect = 2e-05
Identities = 52/178 (29%), Positives = 61/178 (34%), Gaps = 12/178 (6%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
P +K D P PPGP P+ G G G G+G + G G
Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPSGAPGAD-GPQGPPGGIGNPGAVGEKGEPGEAGEPG 1294
Query: 65 PPPQGPLPGPPGALHRWA------LAVPPGAVAGPRPQ--QASPPPCGGPGGPG--GGPG 114
P +G PGP G A PPG P + SP P G PG PG G PG
Sbjct: 1295 LPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPG 1354
Query: 115 DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
A G G G+ G G GP +R PG G E+ G
Sbjct: 1355 PAGQDGPPGDKGDDGEPGQTGSPGPTG-EPGPSGPPGKRGPPGPAGPEGRQGEKGAKG 1411
Score = 47.4 bits (111), Expect = 4e-05
Identities = 54/197 (27%), Positives = 62/197 (31%), Gaps = 32/197 (16%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRA 63
P K PP D P P P G P P G G G G D + G G+ P
Sbjct: 1323 PGPKGPPGDDGPKGSPGPVG-FPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTG 1381
Query: 64 SPPPQGPL-----PGPPGALHRWA---------LAVPPGAVA--GPRPQQASPPPCG--- 104
P P GP PGP G R L PPG GP+ P P G
Sbjct: 1382 EPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRG 1441
Query: 105 -----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRR 153
G GP G PG G+ G G G+ G PG +
Sbjct: 1442 IPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKG 1501
Query: 154 QAPGVGAVGGGSPEREE 170
G G P+ E+
Sbjct: 1502 DRGLPGPQGSSGPKGEQ 1518
Score = 45.8 bits (107), Expect = 1e-04
Identities = 41/118 (34%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 12 PDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPPPQG 69
P DP + P GP PA + G+GG G G G + G++ P P P+G
Sbjct: 419 PYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGP---PGPEG 475
Query: 70 P--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG---------GGPGDA 116
P LPGPPG + PG GP + P G PG PG GG GDA
Sbjct: 476 PAGLPGPPGTMGPTGQVGDPGE-RGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDA 532
Score = 45.8 bits (107), Expect = 1e-04
Identities = 53/183 (28%), Positives = 62/183 (33%), Gaps = 10/183 (5%)
Query: 4 LPKKKPPPPDADPANEPPPPGP-----MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG 58
LP + P P P PPGP M P G VG G G G+ G
Sbjct: 674 LPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPG 733
Query: 59 ARPRASPPPQ-GPL--PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGD 115
+ PP + GPL PG PG PG P + PP GP GP G PG
Sbjct: 734 PQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP--GPQGPIGYPGP 791
Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175
A G+ G G G G G R + G G PE + G
Sbjct: 792 RGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGP 851
Query: 176 NSE 178
N +
Sbjct: 852 NGD 854
Score = 44.3 bits (103), Expect = 3e-04
Identities = 47/148 (31%), Positives = 53/148 (35%), Gaps = 17/148 (11%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVG-ARPRA 63
P + P E PGP P +G G G G G +D G+ G R
Sbjct: 1004 PTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRG 1063
Query: 64 SPPPQGPL--------PGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--GPGGPGGGP 113
P P G L PGPPG P GA AGP P P G GP G G P
Sbjct: 1064 LPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGA-AGPIGIPGRPGPQGPPGPAGEKGAP 1122
Query: 114 GDALGAAAAGVGAAGVVVGVGGAVGVGG 141
G+ AG VG+ G G G
Sbjct: 1123 GEKGPQGPAGRDGLQGPVGLPGPAGPVG 1150
Score = 43.9 bits (102), Expect = 4e-04
Identities = 55/178 (30%), Positives = 59/178 (33%), Gaps = 23/178 (12%)
Query: 7 KKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
+K P +A P GP P RG G G G G D G P+ S
Sbjct: 1283 EKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDG-----PKGS 1337
Query: 65 PPPQG--PLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG-----------GPGGP 109
P P G PGPPG PPG G Q SP P G GP GP
Sbjct: 1338 PGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGP 1397
Query: 110 GGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166
G G A G G G +G G PG R VG G GSP
Sbjct: 1398 AGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSP 1455
Score = 41.6 bits (96), Expect = 0.002
Identities = 48/169 (28%), Positives = 53/169 (31%), Gaps = 35/169 (20%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69
PP PA P PPG M P G VG D G G R P
Sbjct: 470 PPGPEGPAGLPGPPGTMGPT----GQVG---------------DPGERGPPGRPGLPGAD 510
Query: 70 PLPGPPGALHRWALAVPPGAVAGPRPQQASPPPC----------------GGPGGPGGGP 113
LPGPPG + G AG + S GP G G P
Sbjct: 511 GLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRP 570
Query: 114 GDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
G + G+ VG G GV G G RR +A GA G
Sbjct: 571 GPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARG 619
Score = 41.6 bits (96), Expect = 0.002
Identities = 48/152 (31%), Positives = 53/152 (34%), Gaps = 27/152 (17%)
Query: 6 KKKPPPPDA-----DPANEPPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGV 56
K PP P P E P G P PP P G+ G G G D G
Sbjct: 989 KTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKG-----DPGP 1043
Query: 57 VGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDA 116
G + PP PG G PG V + PP GP GP G PG+
Sbjct: 1044 AGLPGKDGPPGLRGFPGDRGL---------PGPVGALGLKGNEGPP--GPPGPAGSPGER 1092
Query: 117 LGAAAAG-VGAAGVVVGVGGAVGVGGCCSGPG 147
A AAG +G G G G G G PG
Sbjct: 1093 GPAGAAGPIGIPG-RPGPQGPPGPAGEKGAPG 1123
Score = 41.2 bits (95), Expect = 0.003
Identities = 55/174 (31%), Positives = 64/174 (36%), Gaps = 26/174 (14%)
Query: 11 PPDADPANEPPPPGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRD-------SGVVGA 59
P P + P GP RG G G G GG G G +R +G G
Sbjct: 903 PGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGP 962
Query: 60 RPRASPPPQGPLPGPPGALHRWAL---AVPPG--AVAGPRPQQASPPPCG--GPGGPGGG 112
+ PP + LPG PG PPG V GP+ P G G GP G
Sbjct: 963 KGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGP 1022
Query: 113 PGD-ALGAAAAGVGAAG--VVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVG 162
PG+ L A G G G+ G G G PG R PG VGA+G
Sbjct: 1023 PGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGD----RGLPGPVGALG 1072
Score = 39.7 bits (91), Expect = 0.007
Identities = 36/120 (30%), Positives = 44/120 (36%), Gaps = 23/120 (19%)
Query: 10 PPPDADPANEPPP-----PGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDR--------- 52
P PD P PP G P +G G +G +G G GDR
Sbjct: 1455 PGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGP 1514
Query: 53 --DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG 110
+ G+ G PP LPGPPG + P GP+ + P P G PG PG
Sbjct: 1515 KGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGP----TGPKGEAGHPGPPGPPGPPG 1570
Score = 37.0 bits (84), Expect = 0.048
Identities = 37/128 (28%), Positives = 44/128 (34%), Gaps = 19/128 (14%)
Query: 22 PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRW 81
PPGPM P G G+ G G G++G LPGP G+
Sbjct: 1460 PPGPMGPP----GLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGS---- 1511
Query: 82 ALAVPPGAVAGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGV 139
+GP+ +Q P G GP GP G PG A G G G G
Sbjct: 1512 ---------SGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGP 1562
Query: 140 GGCCSGPG 147
G PG
Sbjct: 1563 PGPPGPPG 1570
Score = 37.0 bits (84), Expect = 0.048
Identities = 31/85 (36%), Positives = 33/85 (38%), Gaps = 30/85 (35%)
Query: 16 PANEPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP 74
P P PPG P PP P+ G SG G + A P GP PGP
Sbjct: 1526 PIGPPGPPGLPGPPGPKGAKG-----------------SSGPTGPKGEAGHP--GP-PGP 1565
Query: 75 PGALHRWALAVPPGAVAGPRPQQAS 99
PG PPG V P P QAS
Sbjct: 1566 PG---------PPGEVIQPLPIQAS 1581
Score = 35.4 bits (80), Expect = 0.14
Identities = 49/190 (25%), Positives = 66/190 (34%), Gaps = 21/190 (11%)
Query: 5 PKKKPPPP--DADPANE--PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVG 58
P+ +P PP +P + P P G + P +G G G+ G G G G
Sbjct: 713 PQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPG 772
Query: 59 ARPRASPP-PQGPL--PGPPGALHRWALAVPPGAVAGPRPQQASPPPCG----------- 104
+ PP PQGP+ PGP G + G G + + P G
Sbjct: 773 EKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGT-KGEKGEDGFPGFKGDMGIKGDRGEI 831
Query: 105 GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGG 164
GP GP G G G +G G G G PG+ R+ +G G
Sbjct: 832 GPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFP 891
Query: 165 SPEREEVGAG 174
E+ G G
Sbjct: 892 GANGEKGGRG 901
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 57.8 bits (138), Expect = 3e-08
Identities = 58/185 (31%), Positives = 67/185 (36%), Gaps = 23/185 (12%)
Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGG-GVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
K +P PP PP P P P G G+ G G G R +G G +
Sbjct: 76 KGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVG 135
Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQ----------QASPPPCG-----GPGGP 109
PP Q L G PG L PPG P P Q P P G GP G
Sbjct: 136 PPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGE 195
Query: 110 GGGPGDALGAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
G PGD GVG G+ G GGA G G G K PG+ + G +
Sbjct: 196 PGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK-----PGLDGLPGAPGD 250
Query: 168 REEVG 172
+ E G
Sbjct: 251 KGESG 255
Score = 42.7 bits (99), Expect = 9e-04
Identities = 54/192 (28%), Positives = 64/192 (33%), Gaps = 16/192 (8%)
Query: 4 LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
LP PP P EP G R GG GV G G G+ G P
Sbjct: 413 LPGAHGPPGPTGPKGEPGFTG-------RPGGPGVAGALGQKGDLGLPGQPGLRG--PSG 463
Query: 64 SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAG 123
P QGP GP G L PG P +A P GP GP G PG + G
Sbjct: 464 IPGLQGPA-GPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPG------SPG 516
Query: 124 VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEA 183
+ G G G G G + GV G + + G G S A
Sbjct: 517 ITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPA 576
Query: 184 AAARIEAMDPAT 195
A + + PA+
Sbjct: 577 FTAVLTSPFPAS 588
Score = 42.4 bits (98), Expect = 0.001
Identities = 58/195 (29%), Positives = 73/195 (37%), Gaps = 54/195 (27%)
Query: 10 PPPDADPANEP-------PP-------------PGPMPPAPRRG--------GGVG-VGG 40
PP P EP PP PGP P+ +G G +G G
Sbjct: 256 PPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGY 315
Query: 41 GGTGVGGGDRDRD----SGVVGARPR----ASPPPQGP--LPGPPGALHRWALAVPPGAV 90
G G+ G DR G++G R P QGP L GPPG PG+
Sbjct: 316 GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGL---------PGS- 365
Query: 91 AGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
AG ++ P P G GPGGP G PG +G+ GV G G+ G PG
Sbjct: 366 AGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGK---PGVPGERGLPGAHGPPGP 422
Query: 149 SKRRRQAPGVGAVGG 163
+ + + G GG
Sbjct: 423 TGPKGEPGFTGRPGG 437
Score = 42.4 bits (98), Expect = 0.001
Identities = 56/184 (30%), Positives = 71/184 (38%), Gaps = 28/184 (15%)
Query: 11 PPDADPANEPPP---PGPMPPAPRRG--------GGVG-VGGGGTGVGGGDRDRDS---- 54
PP D P PGP P+ +G G +G G G G+ G DR
Sbjct: 274 PPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVP 333
Query: 55 GVVGARPR----ASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGG 108
G++G R P QGP L GPPG L PG P P+ + P GGP G
Sbjct: 334 GLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGL---PGRRGPPGPKGEAGP--GGPPG 388
Query: 109 PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPER 168
G GD + AG G+ GA G G +GP PG V G ++
Sbjct: 389 VPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPG-PTGPKGEPGFTGRPGGPGVAGALGQK 447
Query: 169 EEVG 172
++G
Sbjct: 448 GDLG 451
Score = 42.0 bits (97), Expect = 0.002
Identities = 59/221 (26%), Positives = 73/221 (33%), Gaps = 78/221 (35%)
Query: 9 PPPP----DADPANEPPPPGP-------------MPPAPRRGGGVGVGG--GGTGVGGGD 49
P PP + P EP PPG +P AP +GG G G G G+G
Sbjct: 181 PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPG 240
Query: 50 RDRDSGVVGARPRASPP---------------------------------PQGP------ 70
D G G + + PP PQGP
Sbjct: 241 LDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE 300
Query: 71 --LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGA 126
GPPG + +P + GP+ + P G PG G G PG+ G
Sbjct: 301 PGTRGPPGLIGPTGYGMP--GLPGPKGDRG---PAGVPGLLGDRGEPGEDGEPGEQG--- 352
Query: 127 AGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGGSP 166
G+GG G+ G PG RR PG G G G P
Sbjct: 353 ---PQGLGGPPGLPGSAGLPG----RRGPPGPKGEAGPGGP 386
Score = 35.4 bits (80), Expect = 0.14
Identities = 46/166 (27%), Positives = 55/166 (33%), Gaps = 23/166 (13%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDR-DSGVVGARPRA 63
P + PP P P P P R GV G G G D + + G G
Sbjct: 301 PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP 360
Query: 64 SPPPQGPLPG---PPGALHRWALAVPPGAVA-----GPR--------PQQASPPPCGGPG 107
P LPG PPG PPG GP P + P GP
Sbjct: 361 GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPP 420
Query: 108 GPGGGPGD-ALGAAAAGVGAAGVV-----VGVGGAVGVGGCCSGPG 147
GP G G+ G G AG + +G+ G G+ G PG
Sbjct: 421 GPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPG 466
Score = 30.8 bits (68), Expect = 3.5
Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 25/132 (18%)
Query: 40 GGGTGVGGGDRDRDSGVVGARP--RASPPPQGPLPGPP-----GALHRWALAVPPGAVAG 92
GGG G G G P P +GP+ GPP G L + P + G
Sbjct: 29 GGGAG----------GAAGYAPVKYIQPMQKGPV-GPPFREGKGQYLEMPLPLLPMDLKG 77
Query: 93 PRPQQASPPPCGGPGGPG--GGPGDALGAAAAGVGAAGVV----VGVGGAVGVGGCCSGP 146
P P G PG PG G PG G AG +G G G+ G P
Sbjct: 78 EPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPP 137
Query: 147 GHSKRRRQAPGV 158
G R + PG+
Sbjct: 138 GQPGLRGE-PGI 148
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 57.4 bits (137), Expect = 3e-08
Identities = 56/171 (32%), Positives = 63/171 (36%), Gaps = 21/171 (12%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL---- 71
P N PP P PP P G+GG G D +G GA+ P GP+
Sbjct: 158 PGNPGPPGPPGPPGPP-----GLGGNFAAQMAGGFDEKAG--GAQLGVMQGPMGPMGPRG 210
Query: 72 -PGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAG 123
PGP GA PG V+GP + P P G PG G G PG A G
Sbjct: 211 PPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPG 270
Query: 124 VGAAGVVVGVGGAVGVGGCCSGPG--HSKRRRQAPGVGAVGGGSPEREEVG 172
A G G GV G PG +K APGV G E G
Sbjct: 271 PQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPG 321
Score = 55.1 bits (131), Expect = 2e-07
Identities = 58/175 (33%), Positives = 67/175 (38%), Gaps = 14/175 (8%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
P K +A + PGP P AP G GV G G +G GA R
Sbjct: 845 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 904
Query: 63 ASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPGGP---GGGPGDAL 117
PP PGPPG P GA +GP P +A P GP GP G PGD
Sbjct: 905 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP-PGRAGEPGLQGPAGPPGEKGEPGDDG 963
Query: 118 GAAAAG----VGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
+ A G G AG +VG+ G G G PG S + GA G P
Sbjct: 964 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGP 1018
Score = 52.0 bits (123), Expect = 1e-06
Identities = 64/204 (31%), Positives = 71/204 (34%), Gaps = 46/204 (22%)
Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
+K P D PPGP PA +G G G G R RD G G P
Sbjct: 105 QKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRD-GEPGTPGNPGP 163
Query: 66 P-PQGPLPGPPGALHRWALAV---------------------------PPGAVAGPRPQ- 96
P P GP PGPPG +A + PPG P PQ
Sbjct: 164 PGPPGP-PGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 222
Query: 97 -QASPPPCG-----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144
Q +P G GP GP G PGD A G G GA G G
Sbjct: 223 FQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPG 282
Query: 145 GPGHSKRRRQAPGV-GAVG-GGSP 166
PG K R PG+ GA G G+P
Sbjct: 283 LPG-VKGHRGYPGLDGAKGEAGAP 305
Score = 51.6 bits (122), Expect = 2e-06
Identities = 64/184 (34%), Positives = 71/184 (38%), Gaps = 40/184 (21%)
Query: 10 PPPDADPANE------PPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA 59
PP A PA E P P G P PP P GG G G G G+VG
Sbjct: 643 PPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAP-----GLVGP 697
Query: 60 R-------PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112
R R SP QG L GP G P GA +GP A PP GP G G
Sbjct: 698 RGERGFPGERGSPGAQG-LQGPRGLPGTPGTDGPKGA-SGP----AGPPGAQGPPGLQGM 751
Query: 113 PGDALGAAAAGVGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG--GGSPER 168
PG+ GAAG+ G G VG G PG R +G G G + E+
Sbjct: 752 PGER--------GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803
Query: 169 EEVG 172
EVG
Sbjct: 804 GEVG 807
Score = 50.8 bits (120), Expect = 3e-06
Identities = 56/163 (34%), Positives = 62/163 (38%), Gaps = 23/163 (14%)
Query: 23 PGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP--PGAL 78
PGPM P P G G G G G D G G P P P GP GP PGA
Sbjct: 320 PGPMGPRGLPGERGRTGPAGAA-GARGND-----GQPG--PAGPPGPVGPAGGPGFPGAP 371
Query: 79 HRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVG 138
A P GA GP Q GP G G PG A A+G + G G+ G
Sbjct: 372 GAKGEAGPTGA-RGPEGAQ-------GPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAG 423
Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPERE--EVG-AGYNSE 178
G PG R GA G P+ + E G AG+ E
Sbjct: 424 APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGE 466
Score = 50.1 bits (118), Expect = 6e-06
Identities = 56/162 (34%), Positives = 58/162 (35%), Gaps = 20/162 (12%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPP 75
P EP P GP AP G G G GG G GA P Q L GP
Sbjct: 469 PKGEPGPAGPQG-APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPK 527
Query: 76 GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVV 130
GA P +AGP+ P G PG PG G PGDA G G
Sbjct: 528 GAPGERG----PSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDA--------GPQG-K 574
Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
VG GA G G PG R Q PGV G E G
Sbjct: 575 VGPSGAPGEDGRPGPPGPQGARGQ-PGVMGFPGPKGANGEPG 615
Score = 48.9 bits (115), Expect = 1e-05
Identities = 49/153 (32%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 19 EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGP--LPGPP 75
E PPGP A G G G G + D+G G + P +P PQGP + GP
Sbjct: 826 ETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG-DAGAPGPQGPSGAPGPQGPTGVTGPK 884
Query: 76 GALHRWALAVPPGAVAGPRPQ-QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVG 134
GA R A PPGA P + PP G GP G PG + G G
Sbjct: 885 GA--RGAQG-PPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 941
Query: 135 GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
G G+ G PG GA G P+
Sbjct: 942 GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQ 974
Score = 48.1 bits (113), Expect = 2e-05
Identities = 57/177 (32%), Positives = 68/177 (38%), Gaps = 12/177 (6%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDRDSGVVGARP 61
PK +P P A P P P G RG GGVG +G G G+R A P
Sbjct: 469 PKGEPGP--AGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGP 526
Query: 62 RASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDAL 117
+ +P +GP L GP GA PG + G R P G G GP G PG+
Sbjct: 527 KGAPGERGPSGLAGPKGANGDPGRPGEPG-LPGARGLTGRPGDAGPQGKVGPSGAPGEDG 585
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAPGVGAVGGGSPEREEVG 172
G A GV G G G PG + K APG+ + G E G
Sbjct: 586 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAG 642
Score = 47.0 bits (110), Expect = 5e-05
Identities = 58/196 (29%), Positives = 74/196 (37%), Gaps = 41/196 (20%)
Query: 8 KPPPPDADPANEPPP----PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVG--- 58
+P PP A P PGP P + G G+ G G +D ++G G
Sbjct: 586 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPG 645
Query: 59 -ARP------RASPPPQG--PLPGPPGALHRWALAVPPGAVAGPR----PQQASPPPCGG 105
A P + +P P G LPGPPG PPG P P +A P G
Sbjct: 646 PAGPAGERGEQGAPGPSGFQGLPGPPG---------PPGEGGKPGDQGVPGEAGAPGLVG 696
Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV------- 158
P G G PG+ A G+ + G G G G SGP + PG+
Sbjct: 697 PRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKG-ASGPAGPPGAQGPPGLQGMPGER 755
Query: 159 GAVGGGSP--EREEVG 172
GA G P +R +VG
Sbjct: 756 GAAGIAGPKGDRGDVG 771
Score = 45.1 bits (105), Expect = 2e-04
Identities = 50/162 (30%), Positives = 59/162 (36%), Gaps = 25/162 (15%)
Query: 22 PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGPLPGPPGALHR 80
PPGP+ PA GG G G G G GA+ PR P G PGP GA
Sbjct: 355 PPGPVGPA----GGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS-PGPAGA--- 406
Query: 81 WALAVPPG--AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGAAGVVVGVGGA 136
+ PG + G + +P G PG GP G PG GA G +G G
Sbjct: 407 ---SGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ--------GATG-PLGPKGQ 454
Query: 137 VGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178
G G G + + G G P EE G E
Sbjct: 455 TGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGE 496
Score = 45.1 bits (105), Expect = 2e-04
Identities = 55/158 (34%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 16 PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
P EP PG PA G G G+ G G G+ GA P P+GP PG
Sbjct: 391 PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA------PGIAGAP--GFPGPRGP-PG 441
Query: 74 PPGA---LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
P GA L PG +AG + +Q P GP GP G PG A GA G
Sbjct: 442 PQGATGPLGPKGQTGEPG-IAGFKGEQG-PKGEPGPAGPQGAPGPA--GEEGKRGARGEP 497
Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP 166
GV G +G G PG+ R PG + G G+P
Sbjct: 498 GGV-GPIGPPGERGAPGN----RGFPGQDGLAGPKGAP 530
Score = 44.7 bits (104), Expect = 2e-04
Identities = 58/193 (30%), Positives = 68/193 (35%), Gaps = 39/193 (20%)
Query: 13 DADPANEPPPPGPMPPA--PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGAR----PRA 63
D P PPG PA P R G G G G G G DR ++G VGA P
Sbjct: 1015 DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPG 1074
Query: 64 SPPPQGPLP-----GPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--------- 107
SP P GP G GA + P GA + GP+ + G PG
Sbjct: 1075 SPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRG 1134
Query: 108 -----------GPGGGPGDALGAAAAGV-GAAGVV--VGVGGAVGVGGCCSGPGHSKRRR 153
GP G G + A +G G G V G GA G+ G PG R
Sbjct: 1135 FTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSG 1194
Query: 154 QAPGVGAVGGGSP 166
+ G G P
Sbjct: 1195 ETGPAGPPGNPGP 1207
Score = 44.3 bits (103), Expect = 3e-04
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 9 PPPPDAD--------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
PP P D P+ PPGP+ P+ + G G+ G G R ++G G
Sbjct: 1144 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGAN-GIPGPIGPPGPRGRSGETGPAG-- 1200
Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102
P +P P GP PGPPG + A AG P++ P P
Sbjct: 1201 PPGNPGPPGP-PGPPGP------GIDMSAFAGLGPREKGPDP 1235
Score = 42.4 bits (98), Expect = 0.001
Identities = 47/142 (33%), Positives = 55/142 (38%), Gaps = 30/142 (21%)
Query: 13 DADPANEPPPPGPMPPAPRRG--------GGVGVGG-----------GGTGVGG-GDRDR 52
D A P GP PA RG G G G G TG+ G
Sbjct: 1087 DRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG 1146
Query: 53 DSGVVGARPRASPP-PQGPLPGPPGALHRWALAVPPGAVAGPRPQ-------QASPPPCG 104
SG GA A P P+GP PGP G + PG + P P+ A PP
Sbjct: 1147 PSGDQGASGPAGPSGPRGP-PGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNP 1205
Query: 105 GPGGPGGGPGDALGAAA-AGVG 125
GP GP G PG + +A AG+G
Sbjct: 1206 GPPGPPGPPGPGIDMSAFAGLG 1227
Score = 42.0 bits (97), Expect = 0.002
Identities = 51/176 (28%), Positives = 57/176 (32%), Gaps = 22/176 (12%)
Query: 11 PPDADPAN----EPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVGARP 61
PP AN E PPGP A RG G G G G D G G +
Sbjct: 793 PPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQG 852
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDA 116
A PGP G P G V GP+ + + P G G PG G PG
Sbjct: 853 EAGQKGDAGAPGPQGPSGAPGPQGPTG-VTGPKGARGAQGPPGATGFPGAAGRVGPPGSN 911
Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
G G G G G PG R PG+ G E+ E G
Sbjct: 912 GNPGPPGPPGPS---GKDGPKGARGDSGPPG----RAGEPGLQGPAGPPGEKGEPG 960
Score = 41.2 bits (95), Expect = 0.003
Identities = 52/173 (30%), Positives = 58/173 (33%), Gaps = 21/173 (12%)
Query: 16 PANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-ARPRASPPPQG 69
PA P P G P P G +G G G D ++G G A R P PQG
Sbjct: 214 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQG 273
Query: 70 P-----LPGPPGALHRWALAVPPGA-----VAGPRPQQASPPPCGGPG--GPGGGPGD-- 115
PG PG GA G + + SP G PG GP G PG+
Sbjct: 274 ARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERG 333
Query: 116 -ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
A AAG G G G G GPG G G PE
Sbjct: 334 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 386
Score = 41.2 bits (95), Expect = 0.003
Identities = 55/183 (30%), Positives = 59/183 (32%), Gaps = 22/183 (12%)
Query: 11 PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP--- 67
P A A PP P A R G G G G G GAR + PP
Sbjct: 883 PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 942
Query: 68 ----QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP--CGGPG-----------GPG 110
QGP GPPG P GA P PQ + G PG GP
Sbjct: 943 EPGLQGPA-GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPS 1001
Query: 111 GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREE 170
G PG A+G VG G G G G S PG G +R E
Sbjct: 1002 GEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG-SPGADGPPGRDGAAGVKGDRGE 1060
Query: 171 VGA 173
GA
Sbjct: 1061 TGA 1063
Score = 38.1 bits (87), Expect = 0.022
Identities = 51/169 (30%), Positives = 61/169 (36%), Gaps = 26/169 (15%)
Query: 5 PKKKPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR- 60
P+ P P D P P GP P A G G+ G G G+ G DR G VG +
Sbjct: 718 PRGLPGTPGTDGPKGASGPAGP-PGAQGPPGLQGMPGERGAAGIAGPKGDR--GDVGEKG 774
Query: 61 PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALG 118
P +P G L GP G PPG AG ++ G GP G G A
Sbjct: 775 PEGAPGKDGGRGLTGPIG---------PPGP-AGANGEK-------GEVGPPGPAGSAGA 817
Query: 119 AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
A G G G G G PG + +A G G P+
Sbjct: 818 RGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQ 866
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 57.4 bits (137), Expect = 3e-08
Identities = 56/171 (32%), Positives = 63/171 (36%), Gaps = 21/171 (12%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL---- 71
P N PP P PP P G+GG G D +G GA+ P GP+
Sbjct: 89 PGNPGPPGPPGPPGPP-----GLGGNFAAQMAGGFDEKAG--GAQLGVMQGPMGPMGPRG 141
Query: 72 -PGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAG 123
PGP GA PG V+GP + P P G PG G G PG A G
Sbjct: 142 PPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPG 201
Query: 124 VGAAGVVVGVGGAVGVGGCCSGPG--HSKRRRQAPGVGAVGGGSPEREEVG 172
A G G GV G PG +K APGV G E G
Sbjct: 202 PQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPG 252
Score = 55.1 bits (131), Expect = 2e-07
Identities = 58/175 (33%), Positives = 67/175 (38%), Gaps = 14/175 (8%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
P K +A + PGP P AP G GV G G +G GA R
Sbjct: 776 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 835
Query: 63 ASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPGGP---GGGPGDAL 117
PP PGPPG P GA +GP P +A P GP GP G PGD
Sbjct: 836 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP-PGRAGEPGLQGPAGPPGEKGEPGDDG 894
Query: 118 GAAAAG----VGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
+ A G G AG +VG+ G G G PG S + GA G P
Sbjct: 895 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGP 949
Score = 52.0 bits (123), Expect = 1e-06
Identities = 64/204 (31%), Positives = 71/204 (34%), Gaps = 46/204 (22%)
Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
+K P D PPGP PA +G G G G R RD G G P
Sbjct: 36 QKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRD-GEPGTPGNPGP 94
Query: 66 P-PQGPLPGPPGALHRWALAV---------------------------PPGAVAGPRPQ- 96
P P GP PGPPG +A + PPG P PQ
Sbjct: 95 PGPPGP-PGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 153
Query: 97 -QASPPPCG-----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144
Q +P G GP GP G PGD A G G GA G G
Sbjct: 154 FQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPG 213
Query: 145 GPGHSKRRRQAPGV-GAVG-GGSP 166
PG K R PG+ GA G G+P
Sbjct: 214 LPG-VKGHRGYPGLDGAKGEAGAP 236
Score = 51.6 bits (122), Expect = 2e-06
Identities = 64/184 (34%), Positives = 71/184 (38%), Gaps = 40/184 (21%)
Query: 10 PPPDADPANE------PPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA 59
PP A PA E P P G P PP P GG G G G G+VG
Sbjct: 574 PPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAP-----GLVGP 628
Query: 60 R-------PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112
R R SP QG L GP G P GA +GP A PP GP G G
Sbjct: 629 RGERGFPGERGSPGAQG-LQGPRGLPGTPGTDGPKGA-SGP----AGPPGAQGPPGLQGM 682
Query: 113 PGDALGAAAAGVGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG--GGSPER 168
PG+ GAAG+ G G VG G PG R +G G G + E+
Sbjct: 683 PGER--------GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734
Query: 169 EEVG 172
EVG
Sbjct: 735 GEVG 738
Score = 50.8 bits (120), Expect = 3e-06
Identities = 56/163 (34%), Positives = 62/163 (38%), Gaps = 23/163 (14%)
Query: 23 PGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP--PGAL 78
PGPM P P G G G G G D G G P P P GP GP PGA
Sbjct: 251 PGPMGPRGLPGERGRTGPAGAA-GARGND-----GQPG--PAGPPGPVGPAGGPGFPGAP 302
Query: 79 HRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVG 138
A P GA GP Q GP G G PG A A+G + G G+ G
Sbjct: 303 GAKGEAGPTGA-RGPEGAQ-------GPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAG 354
Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPERE--EVG-AGYNSE 178
G PG R GA G P+ + E G AG+ E
Sbjct: 355 APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGE 397
Score = 50.1 bits (118), Expect = 6e-06
Identities = 56/162 (34%), Positives = 58/162 (35%), Gaps = 20/162 (12%)
Query: 16 PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPP 75
P EP P GP AP G G G GG G GA P Q L GP
Sbjct: 400 PKGEPGPAGPQG-APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPK 458
Query: 76 GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVV 130
GA P +AGP+ P G PG PG G PGDA G G
Sbjct: 459 GAPGERG----PSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDA--------GPQG-K 505
Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
VG GA G G PG R Q PGV G E G
Sbjct: 506 VGPSGAPGEDGRPGPPGPQGARGQ-PGVMGFPGPKGANGEPG 546
Score = 48.9 bits (115), Expect = 1e-05
Identities = 49/153 (32%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 19 EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGP--LPGPP 75
E PPGP A G G G G + D+G G + P +P PQGP + GP
Sbjct: 757 ETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG-DAGAPGPQGPSGAPGPQGPTGVTGPK 815
Query: 76 GALHRWALAVPPGAVAGPRPQ-QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVG 134
GA R A PPGA P + PP G GP G PG + G G
Sbjct: 816 GA--RGAQG-PPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 872
Query: 135 GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
G G+ G PG GA G P+
Sbjct: 873 GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQ 905
Score = 48.1 bits (113), Expect = 2e-05
Identities = 57/177 (32%), Positives = 68/177 (38%), Gaps = 12/177 (6%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDRDSGVVGARP 61
PK +P P A P P P G RG GGVG +G G G+R A P
Sbjct: 400 PKGEPGP--AGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGP 457
Query: 62 RASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDAL 117
+ +P +GP L GP GA PG + G R P G G GP G PG+
Sbjct: 458 KGAPGERGPSGLAGPKGANGDPGRPGEPG-LPGARGLTGRPGDAGPQGKVGPSGAPGEDG 516
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAPGVGAVGGGSPEREEVG 172
G A GV G G G PG + K APG+ + G E G
Sbjct: 517 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAG 573
Score = 47.0 bits (110), Expect = 5e-05
Identities = 58/196 (29%), Positives = 74/196 (37%), Gaps = 41/196 (20%)
Query: 8 KPPPPDADPANEPPP----PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVG--- 58
+P PP A P PGP P + G G+ G G +D ++G G
Sbjct: 517 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPG 576
Query: 59 -ARP------RASPPPQG--PLPGPPGALHRWALAVPPGAVAGPR----PQQASPPPCGG 105
A P + +P P G LPGPPG PPG P P +A P G
Sbjct: 577 PAGPAGERGEQGAPGPSGFQGLPGPPG---------PPGEGGKPGDQGVPGEAGAPGLVG 627
Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV------- 158
P G G PG+ A G+ + G G G G SGP + PG+
Sbjct: 628 PRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKG-ASGPAGPPGAQGPPGLQGMPGER 686
Query: 159 GAVGGGSP--EREEVG 172
GA G P +R +VG
Sbjct: 687 GAAGIAGPKGDRGDVG 702
Score = 45.1 bits (105), Expect = 2e-04
Identities = 50/162 (30%), Positives = 59/162 (36%), Gaps = 25/162 (15%)
Query: 22 PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGPLPGPPGALHR 80
PPGP+ PA GG G G G G GA+ PR P G PGP GA
Sbjct: 286 PPGPVGPA----GGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS-PGPAGA--- 337
Query: 81 WALAVPPG--AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGAAGVVVGVGGA 136
+ PG + G + +P G PG GP G PG GA G +G G
Sbjct: 338 ---SGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ--------GATG-PLGPKGQ 385
Query: 137 VGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178
G G G + + G G P EE G E
Sbjct: 386 TGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGE 427
Score = 45.1 bits (105), Expect = 2e-04
Identities = 55/158 (34%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 16 PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
P EP PG PA G G G+ G G G+ GA P P+GP PG
Sbjct: 322 PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA------PGIAGAP--GFPGPRGP-PG 372
Query: 74 PPGA---LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
P GA L PG +AG + +Q P GP GP G PG A GA G
Sbjct: 373 PQGATGPLGPKGQTGEPG-IAGFKGEQG-PKGEPGPAGPQGAPGPA--GEEGKRGARGEP 428
Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP 166
GV G +G G PG+ R PG + G G+P
Sbjct: 429 GGV-GPIGPPGERGAPGN----RGFPGQDGLAGPKGAP 461
Score = 44.7 bits (104), Expect = 2e-04
Identities = 58/193 (30%), Positives = 68/193 (35%), Gaps = 39/193 (20%)
Query: 13 DADPANEPPPPGPMPPA--PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGAR----PRA 63
D P PPG PA P R G G G G G G DR ++G VGA P
Sbjct: 946 DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPG 1005
Query: 64 SPPPQGPLP-----GPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--------- 107
SP P GP G GA + P GA + GP+ + G PG
Sbjct: 1006 SPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRG 1065
Query: 108 -----------GPGGGPGDALGAAAAGV-GAAGVV--VGVGGAVGVGGCCSGPGHSKRRR 153
GP G G + A +G G G V G GA G+ G PG R
Sbjct: 1066 FTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSG 1125
Query: 154 QAPGVGAVGGGSP 166
+ G G P
Sbjct: 1126 ETGPAGPPGNPGP 1138
Score = 44.3 bits (103), Expect = 3e-04
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 9 PPPPDAD--------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
PP P D P+ PPGP+ P+ + G G+ G G R ++G G
Sbjct: 1075 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGAN-GIPGPIGPPGPRGRSGETGPAG-- 1131
Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102
P +P P GP PGPPG + A AG P++ P P
Sbjct: 1132 PPGNPGPPGP-PGPPGP------GIDMSAFAGLGPREKGPDP 1166
Score = 42.4 bits (98), Expect = 0.001
Identities = 47/142 (33%), Positives = 55/142 (38%), Gaps = 30/142 (21%)
Query: 13 DADPANEPPPPGPMPPAPRRG--------GGVGVGG-----------GGTGVGG-GDRDR 52
D A P GP PA RG G G G G TG+ G
Sbjct: 1018 DRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG 1077
Query: 53 DSGVVGARPRASPP-PQGPLPGPPGALHRWALAVPPGAVAGPRPQ-------QASPPPCG 104
SG GA A P P+GP PGP G + PG + P P+ A PP
Sbjct: 1078 PSGDQGASGPAGPSGPRGP-PGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNP 1136
Query: 105 GPGGPGGGPGDALGAAA-AGVG 125
GP GP G PG + +A AG+G
Sbjct: 1137 GPPGPPGPPGPGIDMSAFAGLG 1158
Score = 42.0 bits (97), Expect = 0.002
Identities = 51/176 (28%), Positives = 57/176 (32%), Gaps = 22/176 (12%)
Query: 11 PPDADPAN----EPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVGARP 61
PP AN E PPGP A RG G G G G D G G +
Sbjct: 724 PPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQG 783
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDA 116
A PGP G P G V GP+ + + P G G PG G PG
Sbjct: 784 EAGQKGDAGAPGPQGPSGAPGPQGPTG-VTGPKGARGAQGPPGATGFPGAAGRVGPPGSN 842
Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
G G G G G PG R PG+ G E+ E G
Sbjct: 843 GNPGPPGPPGPS---GKDGPKGARGDSGPPG----RAGEPGLQGPAGPPGEKGEPG 891
Score = 41.2 bits (95), Expect = 0.003
Identities = 52/173 (30%), Positives = 58/173 (33%), Gaps = 21/173 (12%)
Query: 16 PANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-ARPRASPPPQG 69
PA P P G P P G +G G G D ++G G A R P PQG
Sbjct: 145 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQG 204
Query: 70 P-----LPGPPGALHRWALAVPPGA-----VAGPRPQQASPPPCGGPG--GPGGGPGD-- 115
PG PG GA G + + SP G PG GP G PG+
Sbjct: 205 ARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERG 264
Query: 116 -ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
A AAG G G G G GPG G G PE
Sbjct: 265 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 317
Score = 41.2 bits (95), Expect = 0.003
Identities = 55/183 (30%), Positives = 59/183 (32%), Gaps = 22/183 (12%)
Query: 11 PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP--- 67
P A A PP P A R G G G G G GAR + PP
Sbjct: 814 PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 873
Query: 68 ----QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP--CGGPG-----------GPG 110
QGP GPPG P GA P PQ + G PG GP
Sbjct: 874 EPGLQGPA-GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPS 932
Query: 111 GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREE 170
G PG A+G VG G G G G S PG G +R E
Sbjct: 933 GEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG-SPGADGPPGRDGAAGVKGDRGE 991
Query: 171 VGA 173
GA
Sbjct: 992 TGA 994
Score = 38.1 bits (87), Expect = 0.022
Identities = 51/169 (30%), Positives = 61/169 (36%), Gaps = 26/169 (15%)
Query: 5 PKKKPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR- 60
P+ P P D P P GP P A G G+ G G G+ G DR G VG +
Sbjct: 649 PRGLPGTPGTDGPKGASGPAGP-PGAQGPPGLQGMPGERGAAGIAGPKGDR--GDVGEKG 705
Query: 61 PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALG 118
P +P G L GP G PPG AG ++ G GP G G A
Sbjct: 706 PEGAPGKDGGRGLTGPIG---------PPGP-AGANGEK-------GEVGPPGPAGSAGA 748
Query: 119 AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
A G G G G G PG + +A G G P+
Sbjct: 749 RGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQ 797
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 57.0 bits (136), Expect = 5e-08
Identities = 62/189 (32%), Positives = 69/189 (36%), Gaps = 41/189 (21%)
Query: 17 ANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ-------- 68
AN PP GP P + G GG G GG G VG R PPP
Sbjct: 626 ANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGG----PGGPVGPRLLGPPPPPRGGDPFWD 681
Query: 69 --------GPL---PGP-PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGG-PGGGPGD 115
GP+ PGP PG HR G G P PP G GG GGGP +
Sbjct: 682 GPGDPMRGGPMRGGPGPGPGPYHRGR-----GGRGGNEPPPPPPPFRGARGGRSGGGPPN 736
Query: 116 ALGAAAAG-VGAAGVVVGVGGAVGVG---------GCCSGPGHSKRRRQAPGVGAVGGGS 165
G G VG G G G+G G G G R + PG G++GGG
Sbjct: 737 GRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPG-GSMGGGG 795
Query: 166 PEREEVGAG 174
R G G
Sbjct: 796 GHRPHEGPG 804
Score = 56.6 bits (135), Expect = 6e-08
Identities = 60/194 (30%), Positives = 68/194 (35%), Gaps = 32/194 (16%)
Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVGARPR 62
P P + PPGP P P GG G G +G GGD D G R
Sbjct: 631 PGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGP--GDPMR 688
Query: 63 ASPPPQGPLPGPPGALHRWALA-------VPPGAVAGPRPQQASPPPCGGPGGPGGG--- 112
P GP PGP G HR PP G R ++ P G GGPGGG
Sbjct: 689 GGPMRGGPGPGP-GPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVG 747
Query: 113 -----PGDALGAAAAGVGAAGVVVGVGGAVGVG-------GCCSGPGHSKRRRQAPGVGA 160
P + G G GG +G G G G G R + PG G
Sbjct: 748 GGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPG-GG 806
Query: 161 VGGGSPEREEVGAG 174
+ GGS R G G
Sbjct: 807 ISGGSGHRPHEGPG 820
Score = 53.1 bits (126), Expect = 7e-07
Identities = 54/176 (30%), Positives = 64/176 (36%), Gaps = 19/176 (10%)
Query: 9 PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP- 67
PPP DP + P P RGG + GG G G G R R G G P PPP
Sbjct: 671 PPPRGGDPFWDGPGD------PMRGGPMR-GGPGPGPGPYHRGR-GGRGGNEPPPPPPPF 722
Query: 68 QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG-----GPGDALGAAAA 122
+G G G P G + G + P GG G G GPG +G+
Sbjct: 723 RGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHR 782
Query: 123 GVGAAGVVVGVGGAVGV-----GGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173
G +G GG GG G GH G+GA GG P G+
Sbjct: 783 PHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGS 838
Score = 52.4 bits (124), Expect = 1e-06
Identities = 56/162 (34%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 18 NEPPPPGPM---PPAPRRGGGVGVGGGGTG---VGGGDRDRDSGVVGARPRASP--PPQG 69
NEPPPP P R GGG G GG G VGGG G G +S P +G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEG 772
Query: 70 PLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG-----GPGDALGAAAAGV 124
P G G+ HR P G++ G + P GG G G GPG +GA
Sbjct: 773 P-GGGMGSGHR-PHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAG---- 826
Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
G G GG++G G GH R + PG G G P
Sbjct: 827 GGHRPHEGPGGSMGGSG-----GH--RPHEGPGHGGPHGHRP 861
Score = 45.1 bits (105), Expect = 2e-04
Identities = 53/160 (33%), Positives = 59/160 (36%), Gaps = 31/160 (19%)
Query: 24 GPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPP------PQGPL-PGPPG 76
GP P GGG+ V T + G S + +P S P G L PGP
Sbjct: 570 GPQGPG---GGGINVQEILTSIMGSPNSHPSEELLKQPDYSDKIKQMLVPHGLLGPGPI- 625
Query: 77 ALHRWALAVPPGAVAGPRPQQASPPPCGGP-GGPGGGPGDALGAAAAGV-----GAAGVV 130
A PPG GP+ Q PP GGP GP GGPG +G G G
Sbjct: 626 -----ANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFW 680
Query: 131 VGVG----GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
G G G GG GPG R G G GG P
Sbjct: 681 DGPGDPMRGGPMRGGPGPGPGPYHR-----GRGGRGGNEP 715
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 56.2 bits (134), Expect = 8e-08
Identities = 52/169 (30%), Positives = 63/169 (37%), Gaps = 35/169 (20%)
Query: 23 PGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRD-SGVVGARPRASPPPQGPLPGPPGA 77
PGP+ PA RG G +G G G TG G + D+ +G+ GAR P GPPG
Sbjct: 477 PGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPG- 535
Query: 78 LHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGG---------------PGDAL 117
P V G + +Q P P G GP GP G PG A
Sbjct: 536 ---------PQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAG 586
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
G G G +G G PG + + VGAVG P
Sbjct: 587 PRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGP 635
Score = 53.1 bits (126), Expect = 7e-07
Identities = 50/171 (29%), Positives = 58/171 (33%), Gaps = 17/171 (9%)
Query: 12 PDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL 71
P A N P P G VG G G G G A PP
Sbjct: 201 PGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGA 260
Query: 72 PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVV 130
PGP G + A P G AGPR + P GP GP G PG + L A G GV
Sbjct: 261 PGPKGEIGAVGNAGPAGP-AGPR-GEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVA 318
Query: 131 --------------VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
VG GA G G PG + + ++ G G P+
Sbjct: 319 GAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQ 369
Score = 51.6 bits (122), Expect = 2e-06
Identities = 59/174 (33%), Positives = 65/174 (37%), Gaps = 34/174 (19%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVG-VGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68
P A P PPG P AP G +G VG G G R G VG P
Sbjct: 242 PVGPAGPIGSAGPPG-FPGAPGPKGEIGAVGNAGPAGPAGPR----GEVGL-----PGLS 291
Query: 69 GPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGV 124
GP+ GPPG PGA + G + P G PG GP G PG V
Sbjct: 292 GPV-GPPGN---------PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGP--------V 333
Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178
GAAG G G VG G G S + + G G P EE G N E
Sbjct: 334 GAAG-ATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGE 386
Score = 51.6 bits (122), Expect = 2e-06
Identities = 55/165 (33%), Positives = 63/165 (38%), Gaps = 34/165 (20%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69
P A PA PPGP A RG G G G+ +G GA R PP
Sbjct: 758 PVGAAGPAGPNGPPGP---AGSRGDG-----GPPGM--------TGFPGAAGRTGPPGPS 801
Query: 70 PLPGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAA 122
+ GPPG PPG + GPR Q G G GP G G+ + A
Sbjct: 802 GISGPPG---------PPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEA 852
Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV-GAVGGGSP 166
G G G +G G PG S+ R PGV GAVG P
Sbjct: 853 GTAGPPGTPGPQGLLGAPGILGLPG-SRGERGLPGVAGAVGEPGP 896
Score = 50.4 bits (119), Expect = 4e-06
Identities = 56/178 (31%), Positives = 60/178 (33%), Gaps = 27/178 (15%)
Query: 9 PPPPDADPANEPP-PPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
P PP D + P PPGP P P GG G GVG G G +G P
Sbjct: 47 PGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLG-----PGPMGLMGPRGP 101
Query: 66 PPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVG 125
P PGP G A PG P Q P GP GP G G+ G
Sbjct: 102 PGAAGAPGPQGF---QGPAGEPG-----EPGQTGPAGARGPAGPPGKAGEDGHPGKPGRP 153
Query: 126 AAGVVVGVGGAVGVGGCCSGPGHS-----------KRRRQAPGVGAVGGGSPEREEVG 172
VVG GA G G PG K + APGV G E G
Sbjct: 154 GERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPG 211
Score = 48.9 bits (115), Expect = 1e-05
Identities = 52/172 (30%), Positives = 61/172 (35%), Gaps = 20/172 (11%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRG-----GGVGVGGGGTGVG----GGDRDRDSGVVGAR 60
PP + + P PPGP RG G VG G VG G++ A
Sbjct: 797 PPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAG 856
Query: 61 PRASPPPQGPLPGP-----PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGD 115
P +P PQG L P PG+ L GAV P P + PP G G PG
Sbjct: 857 PPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPP-----GARGPPGA 911
Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166
G G G G G PGH R +G VG G+P
Sbjct: 912 VGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGAAGAP 963
Score = 48.5 bits (114), Expect = 2e-05
Identities = 45/159 (28%), Positives = 56/159 (35%), Gaps = 9/159 (5%)
Query: 9 PPPPDADPANEPPPPGPMPPA-PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP 67
PP PD + EP G + A P G+ G G+ GG ++ G G R P
Sbjct: 614 PPGPDGNKG-EPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEK--GEPGLRGEIGNPG 670
Query: 68 QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA 127
+ G PGA+ A P G R + + P G P GP G PG+ AG
Sbjct: 671 RDGARGAPGAVG----APGPAGATGDRGEAGAAGPAG-PAGPRGSPGERGEVGPAGPNGF 725
Query: 128 GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
G G G G G G VG P
Sbjct: 726 AGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGP 764
Score = 47.4 bits (111), Expect = 4e-05
Identities = 61/181 (33%), Positives = 68/181 (37%), Gaps = 34/181 (18%)
Query: 16 PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
PA EP PG PA RG G G G G R + GVVG + P LPG
Sbjct: 116 PAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPG 175
Query: 74 PPGAL-HRW--ALAVPPGAVA-----GPRPQQASPPPCGGPGGPG-----GGPGDALGAA 120
G H L PGA G + +P G G PG G PG A A
Sbjct: 176 FKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPA--GA 233
Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG----VGAVGGGSP-----EREEV 171
G+ G VG G +G G PG APG +GAVG P R EV
Sbjct: 234 RGSDGSVG-PVGPAGPIGSAGPPGFPG-------APGPKGEIGAVGNAGPAGPAGPRGEV 285
Query: 172 G 172
G
Sbjct: 286 G 286
Score = 46.2 bits (108), Expect = 8e-05
Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 18/150 (12%)
Query: 27 PPAPRRGGGVGVGG-----GGTGVGG--GDRDRDSGVVGARPRASPPPQGPLPGPPGALH 79
P AP G G G G TG G G+R R A R S GP+ GP G +
Sbjct: 192 PGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPV-GPAGPI- 249
Query: 80 RWALAVPPGAVAGPRPQ-------QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVG 132
A PPG P P+ A P GP G G PG + G A + G
Sbjct: 250 --GSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTG 307
Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
GA G+ G PG R VGA G
Sbjct: 308 AKGAAGLPGVAGAPGLPGPRGIPGPVGAAG 337
Score = 46.2 bits (108), Expect = 8e-05
Identities = 57/180 (31%), Positives = 68/180 (37%), Gaps = 19/180 (10%)
Query: 17 ANEPPPPGPMPPAPRRGGGVGVGGGG-TGVGGGDRDRD-SGVVGAR-PRASPPPQGPLPG 73
A P P GP+ PA + G G G G G R SG G R + P +GP G
Sbjct: 960 AGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPR-G 1018
Query: 74 PPGALHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGGPG-DALGAAAAGVGAA 127
PG L PG +AG Q +P G GP GP G G D VG A
Sbjct: 1019 LPGLKGHNGLQGLPG-IAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPA 1077
Query: 128 GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
G + G G G G PG PG V GG + G Y ++ A + R
Sbjct: 1078 G-IRGPQGHQGPAGPPGPPG-------PPGPPGVSGGGYDFGYDGDFYRADQPRSAPSLR 1129
Score = 43.5 bits (101), Expect = 5e-04
Identities = 50/148 (33%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 8 KPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRDSGVVGARPRA 63
K P A P PPGP +RG G G G G G+ G R G+ GA RA
Sbjct: 360 KGEPGSAGPQG---PPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSR--GLPGADGRA 414
Query: 64 SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAA 121
+ GPPG+ A P V GP P P GP G G PG+ A
Sbjct: 415 G------VMGPPGSRG----ASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGK 464
Query: 122 AG-VGAAGVVVGVGGAVGVGGCCSGPGH 148
G VG G + G G +G G PG+
Sbjct: 465 EGPVGLPG-IDGRPGPIGPAGARGEPGN 491
Score = 43.1 bits (100), Expect = 7e-04
Identities = 45/143 (31%), Positives = 51/143 (35%), Gaps = 25/143 (17%)
Query: 30 PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVG----ARPRASPPPQGPL--PGPPGALHR 80
P R G G G G G G DR ++G G A PR SP +G + GP G
Sbjct: 669 PGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGP 728
Query: 81 WALAVPPGA--------------VAGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGV 124
A PGA V GP + P G GP GP G GD G
Sbjct: 729 AGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGF 788
Query: 125 GAAGVVVGVGGAVGVGGCCSGPG 147
A G G G+ G PG
Sbjct: 789 PGAAGRTGPPGPSGISGPPGPPG 811
Score = 41.6 bits (96), Expect = 0.002
Identities = 59/194 (30%), Positives = 66/194 (34%), Gaps = 35/194 (18%)
Query: 11 PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
P A P E PPG A G +G G G + GVVGA A P
Sbjct: 582 PGPAGPRGERGPPGESGAAGPTGP-IGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSG 640
Query: 71 LPGPPGALHRWALAVPPG----AVAGPRPQQASPPPCGGPGGPG-----------GGPGD 115
LPG GA +P G G R + +P G G PG G G+
Sbjct: 641 LPGERGAA-----GIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGE 695
Query: 116 ALGAAAAG-------VGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVG 162
A A AG G G V G G G G PG +K R A G G VG
Sbjct: 696 AGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPG-AKGERGAKGPKGENGVVG 754
Query: 163 GGSPEREEVGAGYN 176
P AG N
Sbjct: 755 PTGPVGAAGPAGPN 768
Score = 41.6 bits (96), Expect = 0.002
Identities = 45/147 (30%), Positives = 51/147 (34%), Gaps = 19/147 (12%)
Query: 11 PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
P A EP P G P RG VG G G+ RD G PP +
Sbjct: 885 PGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRD----GNPGNDGPPGRDG 940
Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
PG G P GA P P GP GP G G+ +G
Sbjct: 941 QPGHKGERGYPGNIGPVGAAGAPGPH--------GPVGPAGKHGNRGETGPSGP------ 986
Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPG 157
VG GAVG G SGP + + PG
Sbjct: 987 VGPAGAVGPRG-PSGPQGIRGDKGEPG 1012
Score = 38.5 bits (88), Expect = 0.017
Identities = 38/124 (30%), Positives = 43/124 (34%), Gaps = 30/124 (24%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRG--------GGVGVGG--------GGTGVGG--GDRD 51
P PA P GP P RG G G+ G G G+ G GD+
Sbjct: 983 PSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042
Query: 52 RDSGVVGARPRASPPPQGPL-----PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGP 106
V A PR P GP G PG V P + GP+ Q P G P
Sbjct: 1043 APGSVGPAGPRGPAGPSGPAGKDGRTGHPGT-------VGPAGIRGPQGHQGPAGPPGPP 1095
Query: 107 GGPG 110
G PG
Sbjct: 1096 GPPG 1099
Score = 38.1 bits (87), Expect = 0.022
Identities = 50/186 (26%), Positives = 58/186 (31%), Gaps = 34/186 (18%)
Query: 10 PPPDADPANEPPPPGPM-------------PPAPRRGGGVGVGGGGTGVGGGDRDRDSGV 56
P A P P PGP P PR G VG+ G VG +G+
Sbjct: 248 PIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPR--GEVGLPGLSGPVGPPGNPGANGL 305
Query: 57 VGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG---------- 104
GA+ A P PG PG + P GA G R P P G
Sbjct: 306 TGAKGAAGLPGVAGAPGLPGPR---GIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGE 362
Query: 105 ----GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGA 160
GP GP G G+ G + G G G G PG R G+
Sbjct: 363 PGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGS 422
Query: 161 VGGGSP 166
G P
Sbjct: 423 RGASGP 428
Score = 37.0 bits (84), Expect = 0.048
Identities = 43/145 (29%), Positives = 49/145 (33%), Gaps = 10/145 (6%)
Query: 23 PGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWA 82
PGP+ A G VG G G+ A P+ P P G G G
Sbjct: 330 PGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGE-EGKRGPNGEAG 388
Query: 83 LAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAV 137
A PPG P + SP G PG G G PG + AGV G G
Sbjct: 389 SAGPPG----PPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEP 444
Query: 138 GVGGCCSGPGHSKRRRQAPGVGAVG 162
G+ G PG A G VG
Sbjct: 445 GLMGPRGLPGSPGNIGPAGKEGPVG 469
Score = 35.0 bits (79), Expect = 0.18
Identities = 35/114 (30%), Positives = 39/114 (34%), Gaps = 11/114 (9%)
Query: 61 PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
P P+G GPPG PPG P PP G PG PG G A
Sbjct: 34 PAGDRGPRGER-GPPG---------PPGRDGEDGPTGPPGPP-GPPGPPGLGGNFAAQYD 82
Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
GVG +G+ G G G PG + A G G P AG
Sbjct: 83 GKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAG 136
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 56.2 bits (134), Expect = 8e-08
Identities = 61/200 (30%), Positives = 68/200 (34%), Gaps = 35/200 (17%)
Query: 9 PPPPDADPANEPPPPG-----------------PMPPAPRRGGGVGVGGGGTGVGGGDRD 51
PP PD P P PPG P PP P G G G G D
Sbjct: 1265 PPGPDG-PRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQ 1323
Query: 52 RDS----GVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG 107
+ G G PP + LPGPPG L P G P P G PG
Sbjct: 1324 KGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPG 1383
Query: 108 GPG-GGPGDALG----AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
PG GP A+G +G G G G+ G GV G PG R+ G G
Sbjct: 1384 APGMRGPEGAMGLPGMRGPSGPGCKG-EPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPG 1442
Query: 163 G-------GSPEREEVGAGY 175
G G P + G GY
Sbjct: 1443 GPGPPGPIGDPGPKGFGPGY 1462
Score = 48.9 bits (115), Expect = 1e-05
Identities = 50/146 (34%), Positives = 58/146 (39%), Gaps = 21/146 (14%)
Query: 9 PPPPDADPANEPPPPGPM--PPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRAS 64
P DPA+ PPGP P +P G G G G G+ G G+ R
Sbjct: 1070 PKGNKGDPASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGI--------QGPRGSPGRPG 1121
Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCGGPG--GPGGGPG----DA 116
PP PG PG L PG + GPR Q P G PG GP G PG
Sbjct: 1122 PPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHG 1181
Query: 117 LGAAAAGVGAAGV-VVGVGGAVGVGG 141
L GA+G+ VG G VG+ G
Sbjct: 1182 LKGQKGTKGASGLHDVGPPGPVGIPG 1207
Score = 47.8 bits (112), Expect = 3e-05
Identities = 46/150 (30%), Positives = 51/150 (34%), Gaps = 16/150 (10%)
Query: 9 PPPPDADPA-----NEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
PP P P +P PG PP PR G G +G G +G G P+
Sbjct: 1199 PPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGPPG-----PAGATGRAPKD 1253
Query: 64 SPPPQGP-LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGGPGDAL 117
P P P GPPG PPG + P CG GP GP G PG
Sbjct: 1254 IPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKG 1313
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
G VG G G G PG
Sbjct: 1314 FPGCDGKDGQKGPVGFPGPQGPHGFPGPPG 1343
Score = 43.9 bits (102), Expect = 4e-04
Identities = 49/158 (31%), Positives = 62/158 (39%), Gaps = 43/158 (27%)
Query: 12 PDADPANE--PPPPGPM--PPAPRRG--GGVGVGG-----------GGTGVGGGDRDRDS 54
P DP N P PPG + PP P +G G G G G G+ G + +
Sbjct: 342 PKGDPGNRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACA 401
Query: 55 GVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GG 112
G++G P PQG PG PG PG P ++P G PG PG G
Sbjct: 402 GMIGP-----PGPQG-FPGLPGL---------PGEAGIPGRPDSAPGKPGKPGSPGLPGA 446
Query: 113 PGDALGAAAAGVGAAGVV---VGVGGAVGVGGCCSGPG 147
PG G+ + V+ VG G G+ G PG
Sbjct: 447 PG------LQGLPGSSVIYCSVGNPGPQGIKGKVGPPG 478
Score = 42.7 bits (99), Expect = 9e-04
Identities = 47/150 (31%), Positives = 54/150 (36%), Gaps = 23/150 (15%)
Query: 12 PDADPANEPPPPGPMPPAPRRG--GGVGVGG--------GGTGVGGGDRDRDSGVVGARP 61
P+ P PPGP P G G +G+ G G G G D+ V P
Sbjct: 59 PEKGSRGPPGPPGPQGPIGPLGAPGPIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFP 118
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG--GPGGPGGGPGDAL 117
P PGPPG + PG G R P G GPGGP G PG+
Sbjct: 119 GLDGIPGH--PGPPGPRGK------PGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEK- 169
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
G V G V G+ G G G PG
Sbjct: 170 GEKGNSVFILGAVKGIQGDRGDPGLPGLPG 199
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/115 (31%), Positives = 40/115 (34%), Gaps = 9/115 (7%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGA 59
P +K P P EP PP + PR G G G G G+ G G G
Sbjct: 1351 PGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGPEGAMGLPGMRGPSGPGCKGE 1410
Query: 60 RPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG 114
+PG PG R G GP P P P G PG G GPG
Sbjct: 1411 PGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGGPGP----PGPIGDPGPKGFGPG 1461
Score = 41.6 bits (96), Expect = 0.002
Identities = 54/173 (31%), Positives = 58/173 (33%), Gaps = 36/173 (20%)
Query: 22 PPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPP----PQGP----L 71
PPG P P G G G G G G D G G PP P GP
Sbjct: 576 PPG-FPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGF 634
Query: 72 PGPPGALHRWALAVPPGAVAGPR----------------PQQASPPPCGGPGGPGGGPGD 115
PGPPG + PG V GP P + PP GP GP G PG
Sbjct: 635 PGPPGERGHPGVPGHPG-VRGPDGLKGQKGDTISCNVTYPGRHGPPGFDGPPGPKGFPGP 693
Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQA--PGVGAVGGGSP 166
A G+ + G G G G PG R PG G G SP
Sbjct: 694 ---QGAPGLSGSD---GHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSP 740
Score = 40.0 bits (92), Expect = 0.006
Identities = 63/204 (30%), Positives = 72/204 (35%), Gaps = 44/204 (21%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRAS 64
PP A P P P PP R G GV G G G+ G D S V R
Sbjct: 620 PPGKAGPVGPPGLGFPGPPGER--GHPGVPGHPGVRGPDGLKGQKGDTISCNVTYPGRHG 677
Query: 65 PP----PQGP--LPGPPGAL-------HRWALAVPPGA-VAGP---RPQQASP------- 100
PP P GP PGP GA H+ P A + GP R P
Sbjct: 678 PPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKG 737
Query: 101 -PPCGGPGGPG--------GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKR 151
P G PG PG G PGD A +G G G+ G G+ G PG
Sbjct: 738 SSPVGPPGPPGSPGVNGQKGIPGD---PAFGHLGPPG-KRGLSGVPGIKGPRGDPGCPGA 793
Query: 152 RRQAPGVGAVGGGSPEREEVGAGY 175
A G +G P+ E AG+
Sbjct: 794 EGPAGIPGFLGLKGPKGREGHAGF 817
Score = 39.7 bits (91), Expect = 0.007
Identities = 49/170 (28%), Positives = 57/170 (33%), Gaps = 29/170 (17%)
Query: 1 MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGG--GDRDRDSGV 56
M I+ +K P EP PPG P G G G G G G G G
Sbjct: 965 MAIISQKGTP-------GEPGPPGD-DGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGE 1016
Query: 57 VGARPRASPP-PQGP-----------LPGPPGALHRWALAVPPG-----AVAGPRPQQAS 99
G + + PP P GP PG PG PPG GP+ +
Sbjct: 1017 PGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGD 1076
Query: 100 PPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS 149
P GP GP G PG G + G+ G G G PG S
Sbjct: 1077 PASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGIQGPRGSPGRPGPPGSS 1126
Score = 38.9 bits (89), Expect = 0.013
Identities = 44/142 (30%), Positives = 52/142 (36%), Gaps = 14/142 (9%)
Query: 10 PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-----ARPRAS 64
PP + P PG P P G G GG G +G+ G RP A
Sbjct: 823 PPGHSCERGAPGIPG-QPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAH 881
Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGA 119
PP LPG PG L PPG GPR P G G PG G G+
Sbjct: 882 GPPG--LPGIPGPFGDDGLPGPPGP-KGPRGLPGFPGFPGERGKPGAEGCPGAKGEPGEK 938
Query: 120 AAAGVGAAGVVVGVGGAVGVGG 141
+G+ + G GA+G G
Sbjct: 939 GMSGLPGDRGLRGAKGAIGPPG 960
Score = 38.5 bits (88), Expect = 0.017
Identities = 55/198 (27%), Positives = 67/198 (33%), Gaps = 54/198 (27%)
Query: 13 DADPANEPPPPG-------PMPPAPR-----------RGG-GVGVGGGGTGVGG------ 47
D P P PG P PP PR RG G G G G GG
Sbjct: 108 DKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPG 167
Query: 48 --GDRDRDSGVVGARPRASPPPQGP-LPGPPGALHRWALAVPPGAVAGP-RPQQASPPPC 103
G++ ++GA P LPG PG+ W P G P P PP
Sbjct: 168 EKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGS---WGAGGPAGPTGYPGEPGLVGPP-- 222
Query: 104 GGPGGPG--GGPGDALGAAAAGVGAAG-----------------VVVGVGGAVGVGGCCS 144
G PG PG G PG + G G + G G G+ G
Sbjct: 223 GQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMVG 282
Query: 145 GPGHSKRRRQAPGVGAVG 162
PG R+ ++ G+GA G
Sbjct: 283 LPGPPGRKGES-GIGAKG 299
Score = 38.5 bits (88), Expect = 0.017
Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 6/125 (4%)
Query: 19 EPPPPGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPG 76
+P PPG P P + G G G G R G G R PP PG PG
Sbjct: 528 DPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGERGPDGPPG---FPGQPG 584
Query: 77 ALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGA 136
+ R A G P + + P G GP G PG A G+G G G G
Sbjct: 585 SHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGFPG-PPGERGH 643
Query: 137 VGVGG 141
GV G
Sbjct: 644 PGVPG 648
Score = 37.7 bits (86), Expect = 0.028
Identities = 50/158 (31%), Positives = 59/158 (37%), Gaps = 41/158 (25%)
Query: 22 PPGPMPPAPRRGGGVGVGG-------------GGTGVGGGDRDR-DSGVVGARPRASPPP 67
PPGP P +P G G+ G G +GV G R D G GA A P
Sbjct: 743 PPGP-PGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPG 801
Query: 68 ----QGP-----------LPGPPG-ALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG- 110
+GP +PGPPG + R A +P Q P G PG PG
Sbjct: 802 FLGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPG--------QPGLPGYPGSPGAPGG 853
Query: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
G PGD AG+ + G GA G G PG
Sbjct: 854 KGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPG 891
Score = 37.4 bits (85), Expect = 0.037
Identities = 49/145 (33%), Positives = 56/145 (38%), Gaps = 22/145 (15%)
Query: 20 PPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGA-RPRASPPPQGPLPGPPG 76
P PGP P G G G G G+ G D G+ G P+ P +G PGPPG
Sbjct: 304 PGFPGPRGD-PGSYGSPGFPGLKGELGLVG-----DPGLFGLIGPKGDPGNRGH-PGPPG 356
Query: 77 ALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPG--DALGAAAAGVGAAGVVVG 132
L PP + GP P G G GP G PG G A AG+ G
Sbjct: 357 -----VLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQG 411
Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPG 157
G G+ G PG R APG
Sbjct: 412 FPGLPGLPGEAGIPG---RPDSAPG 433
Score = 34.7 bits (78), Expect = 0.24
Identities = 44/137 (32%), Positives = 49/137 (35%), Gaps = 18/137 (13%)
Query: 38 VGGGGTGVGGGDRDRDSGVVGARP-RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQ 96
V G G G RD V P + S P GP PGP G P G + P P
Sbjct: 36 VYGSGKKYIGPCGGRDCSVCHCVPEKGSRGPPGP-PGPQG---------PIGPLGAPGPI 85
Query: 97 QASPPP-CGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRR--R 153
S G GP G GD GV + G+ G G G PG S R
Sbjct: 86 GLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNGSR 145
Query: 154 QAPGV----GAVGGGSP 166
PG GA+G G P
Sbjct: 146 GDPGFPGGRGALGPGGP 162
Score = 34.7 bits (78), Expect = 0.24
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 25/115 (21%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR-- 60
P+ +P PP AD + P PG +P AP G G G G G G + G+ G R
Sbjct: 1362 PRGEPGPP-ADVDDCPRIPG-LPGAPGMRGPEGAMGLPGMRGPSGPGCKGEPGLDGRRGV 1419
Query: 61 ---PRASPPP-------QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGG 105
P + PP + PG PG PPG + P P+ P GG
Sbjct: 1420 DGVPGSPGPPGRKGDTGEDGYPGGPG---------PPGPIGDPGPKGFGPGYLGG 1465
Score = 33.1 bits (74), Expect = 0.70
Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 15/146 (10%)
Query: 14 ADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
A P P PG + P P + G G+ G GVG + D G VG + SP P +
Sbjct: 207 AGPTGYPGEPGLVGP-PGQPGRPGLKGN-PGVGVKGQMGDPGEVGQQ--GSPGPTLLVEP 262
Query: 74 PPGALHRWALAVP--PGAVAGPRPQQ-------ASPPPCGGPG--GPGGGPGDALGAAAA 122
P L++ + PG V P P + G PG GP G PG
Sbjct: 263 PDFCLYKGEKGIKGIPGMVGLPGPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFP 322
Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGH 148
G+ +VG G G+ G PG+
Sbjct: 323 GLKGELGLVGDPGLFGLIGPKGDPGN 348
Score = 30.8 bits (68), Expect = 3.5
Identities = 37/138 (26%), Positives = 49/138 (35%), Gaps = 14/138 (10%)
Query: 20 PPPPGPMPPAPRRGGGVGVGGG-GTGVGGGDRDRDSGVVGARPRASPPPQGPL------P 72
PP P P P G G+ G + G + G+ GA P + P
Sbjct: 406 PPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVIYCSVGNP 465
Query: 73 GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVV- 130
GP G + PPG GP+ ++ + C GP G PG L G G+
Sbjct: 466 GPQGIKGKVG---PPGG-RGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPG 521
Query: 131 -VGVGGAVGVGGCCSGPG 147
+G G G G PG
Sbjct: 522 WLGTKGDPGPPGAEGPPG 539
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 56.2 bits (134), Expect = 8e-08
Identities = 40/116 (34%), Positives = 46/116 (39%), Gaps = 20/116 (17%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58
P+ PP P PPPPG P +GG G G GG + R S
Sbjct: 242 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPP 301
Query: 59 ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
+P+ PP G P GPP PPG GP PQ + PPP G P GP
Sbjct: 302 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 348
Score = 53.9 bits (128), Expect = 4e-07
Identities = 39/115 (33%), Positives = 45/115 (39%), Gaps = 19/115 (16%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGG-----DRDRDSGVVGA 59
P+ PP P PPPPG P +GG G G G D+ R
Sbjct: 57 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPG 116
Query: 60 RPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
+P+ PP G P GPP PPG GP PQ + PPP G P GP
Sbjct: 117 KPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 162
Score = 53.9 bits (128), Expect = 4e-07
Identities = 39/116 (33%), Positives = 46/116 (39%), Gaps = 20/116 (17%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58
P+ PP P PPPPG P +GG G G G ++ R S
Sbjct: 118 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPP 177
Query: 59 ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
+P+ PP G P GPP PPG GP PQ + PPP G P GP
Sbjct: 178 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 224
Score = 52.4 bits (124), Expect = 1e-06
Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
P+ PP P PPPPG P +GG G G G + G++ R++
Sbjct: 304 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG----GSKSRSA 359
Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113
P G GPP PP A G PQQ PP G P GP P
Sbjct: 360 RSPPGKPQGPPQQEGNNPQGPPPPA--GGNPQQPQAPPAGQPQGPPRPP 406
Score = 51.2 bits (121), Expect = 2e-06
Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 20/116 (17%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58
P+ PP P PPPPG P +GG G G G ++ + +
Sbjct: 180 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPP 239
Query: 59 ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
+P+ PP G P GPP PPG GP PQ + PPP G P GP
Sbjct: 240 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 286
Score = 47.0 bits (110), Expect = 5e-05
Identities = 37/111 (33%), Positives = 43/111 (38%), Gaps = 10/111 (9%)
Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
K + PPP D + P P P P GG G G G G +P+ P
Sbjct: 97 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GNKPQGPP 154
Query: 66 PPQGPL-PGPPGALHRWALAVPPGAVAGP------RPQQASPPPCGGPGGP 109
PP P P P G + PPG GP +PQ PPP G P GP
Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP-GKPQGP 204
Score = 46.2 bits (108), Expect = 8e-05
Identities = 43/136 (31%), Positives = 51/136 (37%), Gaps = 36/136 (26%)
Query: 9 PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGGG-------GTGVGGGDRD 51
PPPP P PP P GP PP P +G G GG++
Sbjct: 194 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP 253
Query: 52 RDSGVVGARPRASPP-----PQGPLP-----GPP--GALHRWALAVPPGAVAGP------ 93
+ +P+ PP PQGP P GPP G + PPG GP
Sbjct: 254 QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGN 313
Query: 94 RPQQASPPPCGGPGGP 109
+PQ PPP G P GP
Sbjct: 314 QPQGPPPPP-GKPQGP 328
Score = 45.8 bits (107), Expect = 1e-04
Identities = 37/111 (33%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
P+ PP P P PPG P P GG G G G G +P+
Sbjct: 36 PQGAPPQGGNKPQGPPSPPGK-PQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GNKPQGP 92
Query: 65 PPPQGPLPGPPGALHRWALAVPPGAVAGP------RPQQASPPPCGGPGGP 109
PPP P PP + PPG GP +PQ PPP G P GP
Sbjct: 93 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP-GKPQGP 142
Score = 31.2 bits (69), Expect = 2.7
Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 30/97 (30%)
Query: 9 PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGG------------------ 40
PPPP P PP P GP PP P +GG
Sbjct: 318 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNP 377
Query: 41 -GGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPP 75
G GG+ + +P+ P PPQG P P
Sbjct: 378 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 56.2 bits (134), Expect = 8e-08
Identities = 48/152 (31%), Positives = 53/152 (34%), Gaps = 29/152 (19%)
Query: 5 PKKKPPPPDAD---------------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGD 49
P PPPP A A PP PGP P PR +
Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAP---- 184
Query: 50 RDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGP 109
A P A PP GP PP A+ +PP PQQ PPP P
Sbjct: 185 ---------AAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPP 235
Query: 110 GGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
GG A G AA V VV +GG+ G GG
Sbjct: 236 EGGAVRA-GGAARPVSLREVVRYLGGSGGAGG 266
Score = 37.4 bits (85), Expect = 0.037
Identities = 33/111 (29%), Positives = 36/111 (32%), Gaps = 16/111 (14%)
Query: 19 EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPPGA 77
+PP G PPAP R R + A P +P PP P P A
Sbjct: 100 QPPRRGATPPAPPRA---------------PRGAPAAAAAAAPPPTPAPPPPPAPVAAAA 144
Query: 78 LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAG 128
R A A A P P A P P P P A A A AG
Sbjct: 145 PARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
Score = 35.4 bits (80), Expect = 0.14
Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 43/130 (33%)
Query: 5 PKKKPPP------PDADPANEPPPPG----PMPPAPR---RGGGVGVGG----------- 40
P++ PPP P P +PP P P PP P+ GG V GG
Sbjct: 196 PRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVV 255
Query: 41 ---GGTGVGGG--DRDRDSGVVGARPRASPPPQGPLPGPPGALHR---WALAVPPGAVAG 92
GG+G GG R R G++ A G L R ALA+P G G
Sbjct: 256 RYLGGSGGAGGRLTRGRVQGLLEEEAAAR-----------GRLERTRLGALALPRGDRPG 304
Query: 93 PRPQQASPPP 102
P AS P
Sbjct: 305 RAPPAASARP 314
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/61 (32%), Positives = 21/61 (34%)
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121
R PP +G P P R A A A P P PP P P A AA
Sbjct: 98 RVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAAT 157
Query: 122 A 122
A
Sbjct: 158 A 158
>gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo
sapiens]
Length = 921
Score = 55.5 bits (132), Expect = 1e-07
Identities = 58/178 (32%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 5 PKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-- 60
PK P PP PA EP PG P P G G G +G + + GV G+R
Sbjct: 297 PKGPPGPP--GPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGF 354
Query: 61 -PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL 117
R P P GP G PG L R PG P P P P G G G GD L
Sbjct: 355 PGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP----PGPPGPRGTIGFHDGDPL 410
Query: 118 GAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173
A G +G + G+ G G G PG + + G +G EVGA
Sbjct: 411 CPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELG-------EVGA 461
Score = 49.7 bits (117), Expect = 7e-06
Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 35/185 (18%)
Query: 22 PPGPMPPAPRRG--GGVGVGG-----GGTGVGGGD-RDRDSGVVGARPRASPP-PQGP-- 70
PPG P RG G G+ G G TG+ G D RD G+ G + P P G
Sbjct: 509 PPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAG 568
Query: 71 ---LPGPPGALHRWALAVPPGAVAGP----------RPQQASPPPCGGPGGPGGGPGDAL 117
LPG PG +A G+ P +P Q PP GP GP G PG
Sbjct: 569 LQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRG 628
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVGGGSPEREEVGA 173
G +G G+ G+ G PG PG+ G VG P+ E+ +
Sbjct: 629 ELGPVGSPGLPGKLGSLGSPGLPGLPGPPG-------LPGMKGDRGVVGEPGPKGEQGAS 681
Query: 174 GYNSE 178
G E
Sbjct: 682 GEEGE 686
Score = 37.4 bits (85), Expect = 0.037
Identities = 49/161 (30%), Positives = 54/161 (33%), Gaps = 33/161 (20%)
Query: 12 PDADPANEPPPPGPMPPAPRRGGGVGVGG---------GGTGVGGGDRDRDSGVVGARPR 62
P DP PP P PP PR G G G +G G R G GA+
Sbjct: 380 PVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMR--GHKGAKGE 437
Query: 63 ASPP----------PQGPL-----PGPPGA--LHRWALAVPPGAVAGPRPQQASPPPCGG 105
P QG L GPPGA L V G R P P G
Sbjct: 438 IGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGL 497
Query: 106 PGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
PG PG G PG+A G A + G+ G G G
Sbjct: 498 PGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTG 538
Score = 36.2 bits (82), Expect = 0.082
Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 24/111 (21%)
Query: 62 RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121
R P QGP PGPPG PPG G GP G PG A
Sbjct: 268 RGPPGEQGP-PGPPG---------PPGV--------PGIDGIDGDRGPKGPPGPPGPAGE 309
Query: 122 AGVGAAGVVVGVGGAVGVGGCCSGPGH--SKRRRQAPGV----GAVGGGSP 166
G A G GA G+ G PG SK ++ PGV G G G P
Sbjct: 310 PGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIP 360
Score = 35.0 bits (79), Expect = 0.18
Identities = 34/111 (30%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Query: 53 DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112
DSG G R PP GP PGPPG P P PP G GP G
Sbjct: 785 DSGATGLPGRPGPP--GP-PGPPGEN-----GFPGQMGIRGLPGIKGPPGALGLRGPKGD 836
Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
G+ G G G+ +G G G R PGV + G
Sbjct: 837 LGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPG 887
Score = 34.7 bits (78), Expect = 0.24
Identities = 51/201 (25%), Positives = 65/201 (32%), Gaps = 49/201 (24%)
Query: 9 PPPP-------DADPANEPPPPGPMPPAPRRG--------GGVGVGGGGTGVGGGDRDRD 53
P PP D EP P G + G G +G+ G G
Sbjct: 654 PGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGL 713
Query: 54 SGVVGAR-------PRASPPPQGPLPGPPGALHRWALAVPPG------------------ 88
G G+R PR P P+G + G GA + PPG
Sbjct: 714 RGPEGSRGLPGVEGPRGPPGPRG-VQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQE 772
Query: 89 -----AVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
A + RP + P GP GP G PG+ G+ + G GA+G+ G
Sbjct: 773 HFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRG 832
Query: 142 CCSGPGHSKRRRQAPGVGAVG 162
G K R PG G G
Sbjct: 833 -PKGDLGEKGERGPPGRGPNG 852
Score = 33.1 bits (74), Expect = 0.70
Identities = 41/137 (29%), Positives = 44/137 (32%), Gaps = 24/137 (17%)
Query: 12 PDADPANEPPPPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
PD+ P PGP PP P G G G G+ G PP
Sbjct: 784 PDSGATGLPGRPGPPGPPGPP---------GENGFPG-----QMGIRGLPGIKGPPGALG 829
Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG----GGPGDALGAAAAGVGA 126
L GP G L PPG R P G PG PG G G GV
Sbjct: 830 LRGPKGDLGEKGERGPPG-----RGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAG 884
Query: 127 AGVVVGVGGAVGVGGCC 143
V G G G+ G C
Sbjct: 885 IPGVPGPPGPPGLPGFC 901
>gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo
sapiens]
Length = 678
Score = 55.5 bits (132), Expect = 1e-07
Identities = 58/178 (32%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 5 PKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-- 60
PK P PP PA EP PG P P G G G +G + + GV G+R
Sbjct: 54 PKGPPGPP--GPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGF 111
Query: 61 -PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL 117
R P P GP G PG L R PG P P P P G G G GD L
Sbjct: 112 PGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP----PGPPGPRGTIGFHDGDPL 167
Query: 118 GAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173
A G +G + G+ G G G PG + + G +G EVGA
Sbjct: 168 CPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELG-------EVGA 218
Score = 49.7 bits (117), Expect = 7e-06
Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 35/185 (18%)
Query: 22 PPGPMPPAPRRG--GGVGVGG-----GGTGVGGGD-RDRDSGVVGARPRASPP-PQGP-- 70
PPG P RG G G+ G G TG+ G D RD G+ G + P P G
Sbjct: 266 PPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAG 325
Query: 71 ---LPGPPGALHRWALAVPPGAVAGP----------RPQQASPPPCGGPGGPGGGPGDAL 117
LPG PG +A G+ P +P Q PP GP GP G PG
Sbjct: 326 LQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRG 385
Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVGGGSPEREEVGA 173
G +G G+ G+ G PG PG+ G VG P+ E+ +
Sbjct: 386 ELGPVGSPGLPGKLGSLGSPGLPGLPGPPG-------LPGMKGDRGVVGEPGPKGEQGAS 438
Query: 174 GYNSE 178
G E
Sbjct: 439 GEEGE 443
Score = 38.1 bits (87), Expect = 0.022
Identities = 43/130 (33%), Positives = 47/130 (36%), Gaps = 33/130 (25%)
Query: 52 RDSGVVG---------ARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102
RD G +G A R P QGP PGPPG PPG
Sbjct: 6 RDRGALGLLLLGLCLCAAQRGPPGEQGP-PGPPG---------PPGV--------PGIDG 47
Query: 103 CGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH--SKRRRQAPGV-- 158
G GP G PG A G A G GA G+ G PG SK ++ PGV
Sbjct: 48 IDGDRGPKGPPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPG 107
Query: 159 --GAVGGGSP 166
G G G P
Sbjct: 108 SRGFPGRGIP 117
Score = 37.4 bits (85), Expect = 0.037
Identities = 49/161 (30%), Positives = 54/161 (33%), Gaps = 33/161 (20%)
Query: 12 PDADPANEPPPPGPMPPAPRRGGGVGVGG---------GGTGVGGGDRDRDSGVVGARPR 62
P DP PP P PP PR G G G +G G R G GA+
Sbjct: 137 PVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMR--GHKGAKGE 194
Query: 63 ASPP----------PQGPL-----PGPPGA--LHRWALAVPPGAVAGPRPQQASPPPCGG 105
P QG L GPPGA L V G R P P G
Sbjct: 195 IGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGL 254
Query: 106 PGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
PG PG G PG+A G A + G+ G G G
Sbjct: 255 PGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTG 295
Score = 35.0 bits (79), Expect = 0.18
Identities = 34/111 (30%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Query: 53 DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112
DSG G R PP GP PGPPG P P PP G GP G
Sbjct: 542 DSGATGLPGRPGPP--GP-PGPPGEN-----GFPGQMGIRGLPGIKGPPGALGLRGPKGD 593
Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
G+ G G G+ +G G G R PGV + G
Sbjct: 594 LGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPG 644
Score = 34.7 bits (78), Expect = 0.24
Identities = 51/201 (25%), Positives = 65/201 (32%), Gaps = 49/201 (24%)
Query: 9 PPPP-------DADPANEPPPPGPMPPAPRRG--------GGVGVGGGGTGVGGGDRDRD 53
P PP D EP P G + G G +G+ G G
Sbjct: 411 PGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGL 470
Query: 54 SGVVGAR-------PRASPPPQGPLPGPPGALHRWALAVPPG------------------ 88
G G+R PR P P+G + G GA + PPG
Sbjct: 471 RGPEGSRGLPGVEGPRGPPGPRG-VQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQE 529
Query: 89 -----AVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
A + RP + P GP GP G PG+ G+ + G GA+G+ G
Sbjct: 530 HFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRG 589
Query: 142 CCSGPGHSKRRRQAPGVGAVG 162
G K R PG G G
Sbjct: 590 -PKGDLGEKGERGPPGRGPNG 609
Score = 33.1 bits (74), Expect = 0.70
Identities = 41/137 (29%), Positives = 44/137 (32%), Gaps = 24/137 (17%)
Query: 12 PDADPANEPPPPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
PD+ P PGP PP P G G G G+ G PP
Sbjct: 541 PDSGATGLPGRPGPPGPPGPP---------GENGFPG-----QMGIRGLPGIKGPPGALG 586
Query: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG----GGPGDALGAAAAGVGA 126
L GP G L PPG R P G PG PG G G GV
Sbjct: 587 LRGPKGDLGEKGERGPPG-----RGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAG 641
Query: 127 AGVVVGVGGAVGVGGCC 143
V G G G+ G C
Sbjct: 642 IPGVPGPPGPPGLPGFC 658
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 55.5 bits (132), Expect = 1e-07
Identities = 44/133 (33%), Positives = 49/133 (36%), Gaps = 17/133 (12%)
Query: 6 KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
K + PPP D + P P P P GG G G G G +P+ P
Sbjct: 137 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GKKPQGPP 194
Query: 66 PPQGPLPGPPGALHRWALAVPPGAVAGPRPQ-----QASPPPCGGPGGP---GGG----- 112
PP P PP + PPG GP PQ Q PPP G P GP GG
Sbjct: 195 PPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 254
Query: 113 --PGDALGAAAAG 123
PG G A G
Sbjct: 255 PPPGKPQGPPAQG 267
Score = 53.1 bits (126), Expect = 7e-07
Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTG-----VGGGDRDRDSGVVGA 59
P+ PP P PPPPG P +GG G G GD+ R
Sbjct: 97 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPG 156
Query: 60 RPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQ----QASPPPCGGPGGP 109
+P+ PP G P GPP PPG GP PQ PPP G P GP
Sbjct: 157 KPQGPPPQGGNQPQGPP---------PPPGKPQGPPPQGGKKPQGPPPPGKPQGP 202
Score = 52.0 bits (123), Expect = 1e-06
Identities = 38/111 (34%), Positives = 43/111 (38%), Gaps = 29/111 (26%)
Query: 9 PPPPDADPANEPP-----PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
PPPP P PP P GP PP +G GD+ R +P+
Sbjct: 50 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ----------GDKSRSPRSPPGKPQG 99
Query: 64 SPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
PP G P GPP PPG GP PQ + PPP G P GP
Sbjct: 100 PPPQGGNQPQGPPP---------PPGKPQGPPPQGGNRPQGPPPPGKPQGP 141
Score = 52.0 bits (123), Expect = 1e-06
Identities = 40/123 (32%), Positives = 47/123 (38%), Gaps = 31/123 (25%)
Query: 9 PPPPDADPANEPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP 67
PPP PPPPG P P P+ GD+ R S +P+ PP
Sbjct: 182 PPPQGGKKPQGPPPPGKPQGPPPQ----------------GDKSRSSQSPPGKPQGPPPQ 225
Query: 68 QGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGPGGGPGDALGAAAA 122
G P GPP PPG GP PQ + PPP G P GP G +A +
Sbjct: 226 GGNQPQGPP---------PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARS 276
Query: 123 GVG 125
G
Sbjct: 277 PPG 279
Score = 51.6 bits (122), Expect = 2e-06
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 20/116 (17%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVG------GGGTGVGGGDRDRDSGVVG 58
P+ PP P PPPPG P +GG G G GG + + +
Sbjct: 219 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPP 278
Query: 59 ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113
+P+ P +G P GPP PP AG PQQ PP G P GP P
Sbjct: 279 GKPQGPPQQEGNNPQGPP----------PP---AGGNPQQPQAPPAGQPQGPPRPP 321
Score = 48.1 bits (113), Expect = 2e-05
Identities = 38/111 (34%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
P+ PP D +++ PP P P P+ GG G G G G +P+
Sbjct: 199 PQGPPPQGDKSRSSQSPPGKPQGPPPQ--GGNQPQGPPPPPGKPQGPPPQG--GNKPQGP 254
Query: 65 PPPQGPLPGPP--GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113
PPP P GPP G + PPG GP PQQ P G P GG P
Sbjct: 255 PPPGKP-QGPPAQGGSKSQSARSPPGKPQGP-PQQEGNNPQGPPPPAGGNP 303
Score = 34.3 bits (77), Expect = 0.31
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 17/56 (30%)
Query: 58 GARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
G P+ PQGP P PPG GP PQ + PPP G P GP
Sbjct: 38 GPSPQGGNKPQGPPP-------------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 80
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 30/97 (30%)
Query: 9 PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGG------------------ 40
PPPP P PP P GP PP P +GG
Sbjct: 233 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNP 292
Query: 41 -GGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPP 75
G GG+ + +P+ P PPQG P P
Sbjct: 293 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 329
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,944,788
Number of Sequences: 37866
Number of extensions: 2120193
Number of successful extensions: 38708
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 1526
Number of HSP's that attempted gapping in prelim test: 15785
Number of HSP's gapped (non-prelim): 13529
length of query: 566
length of database: 18,247,518
effective HSP length: 108
effective length of query: 458
effective length of database: 14,157,990
effective search space: 6484359420
effective search space used: 6484359420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.