LOC647166 1237

Name: LOC647166	Sequence: fasta or formatted (486aa)		NCBI GI: 113424170
Description: PREDICTED: similar to hCG28707		Not currently referenced in the text
Other entries for this name: alt prot {386aa} PREDICTED: similar to hCG28707 alt prot {386aa} PREDICTED: similar to hCG28707
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 39 3 C cysteine 1.2 6 1 D aspartate 4.1 20 1 E glutamate 7.6 37 2 F phenylalanine 3.5 17 2 G glycine 6.0 29 2 H histidine 3.1 15 1 I isoleucine 2.9 14 2 K lysine 7.0 34 2 L leucine 8.2 40 2 M methionine 1.4 7 1 N asparagine 2.5 12 1 P proline 5.6 27 1 Q glutamine 4.7 23 1 R arginine 7.8 38 2 S serine 11.7 57 3 T threonine 5.1 25 1 V valine 4.7 23 3 W tryptophan 1.6 8 1 Y tyrosine 3.1 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG28707 LOC647166 0.767 PREDICTED: similar to hCG28707 LOC647166 0.767 PREDICTED: similar to hCG28707 AGGF1 0.012 angiogenic factor VG5Q SRRM2 0.008 splicing coactivator subunit SRm300 MLLT1 0.008 myeloid/lymphoid or mixed-lineage leukemia (trithora... PHOX2B 0.007 paired-like homeobox 2b CAD 0.007 carbamoylphosphate synthetase 2/aspartate transcarba... DHDPSL 0.006 DHDPS-like protein isoform 1 ZEB2 0.006 zinc finger homeobox 1b RPS6KA5 0.006 ribosomal protein S6 kinase, polypeptide 5 isoform a... WDR74 0.006 WD repeat domain 74 MDM1 0.005 mouse Mdm1 nuclear protein homolog isoform 2 NOVA1 0.005 neuro-oncological ventral antigen 1 isoform 1 NOVA1 0.005 neuro-oncological ventral antigen 1 isoform 2 COL2A1 0.005 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.005 collagen, type II, alpha 1 isoform 2 precursor [Hom... HOXA6 0.005 homeobox A6 COL27A1 0.005 collagen, type XXVII, alpha 1 LIMCH1 0.005 LIM and calponin homology domains 1 isoform e [Homo... LIMCH1 0.005 LIM and calponin homology domains 1 isoform d [Homo... LIMCH1 0.005 LIM and calponin homology domains 1 isoform c [Homo... LIMCH1 0.005 LIM and calponin homology domains 1 isoform b [Homo... LIMCH1 0.005 LIM and calponin homology domains 1 isoform a [Homo... COL5A1 0.004 alpha 1 type V collagen preproprotein CEP250 0.004 centrosomal protein 2 GLDN 0.004 gliomedin WDR33 0.004 WD repeat domain 33 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.