LOC647166 8509

Name: LOC647166	Sequence: fasta or formatted (386aa)		NCBI GI: 169206491
Description: PREDICTED: similar to hCG28707		Not currently referenced in the text
Other entries for this name: alt prot {486aa} PREDICTED: similar to hCG28707 alt mRNA {386aa} PREDICTED: similar to hCG28707
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 31 2 C cysteine 0.8 3 1 D aspartate 4.9 19 1 E glutamate 7.3 28 2 F phenylalanine 4.1 16 2 G glycine 4.1 16 2 H histidine 3.4 13 1 I isoleucine 3.4 13 2 K lysine 7.5 29 2 L leucine 7.5 29 2 M methionine 2.1 8 1 N asparagine 1.8 7 1 P proline 5.4 21 1 Q glutamine 4.4 17 1 R arginine 9.1 35 2 S serine 11.1 43 3 T threonine 5.4 21 1 V valine 3.9 15 2 W tryptophan 1.8 7 1 Y tyrosine 3.9 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG28707 LOC647166 1.000 PREDICTED: similar to hCG28707 LOC647166 0.967 PREDICTED: similar to hCG28707 AGGF1 0.015 angiogenic factor VG5Q SRRM2 0.011 splicing coactivator subunit SRm300 MLLT1 0.011 myeloid/lymphoid or mixed-lineage leukemia (trithora... ZEB2 0.008 zinc finger homeobox 1b RPS6KA5 0.008 ribosomal protein S6 kinase, polypeptide 5 isoform a... WDR74 0.008 WD repeat domain 74 MDM1 0.007 mouse Mdm1 nuclear protein homolog isoform 2 LIMCH1 0.007 LIM and calponin homology domains 1 isoform e [Homo... LIMCH1 0.007 LIM and calponin homology domains 1 isoform d [Homo... LIMCH1 0.007 LIM and calponin homology domains 1 isoform c [Homo... LIMCH1 0.007 LIM and calponin homology domains 1 isoform b [Homo... LIMCH1 0.007 LIM and calponin homology domains 1 isoform a [Homo... IL1R1 0.005 interleukin 1 receptor, type I precursor LARP7 0.005 La ribonucleoprotein domain family, member 7 LARP7 0.005 La ribonucleoprotein domain family, member 7 PKD1L1 0.005 polycystin-1L1 C20orf94 0.005 hypothetical protein LOC128710 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.