Guide to the Human Genome
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Name: DHDPSL Sequence: fasta or formatted (327aa) NCBI GI: 31543060
Description:

DHDPS-like protein isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {164aa} DHDPS-like protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         30           2
 C cysteine            2.1          7           2
 D aspartate           3.7         12           1
 E glutamate           4.9         16           3
 F phenylalanine       3.4         11           1
 G glycine            10.1         33           2
 H histidine           1.8          6           2
 I isoleucine          3.1         10           1
 K lysine              3.7         12           2
 L leucine             9.8         32           3
 M methionine          3.1         10           1
 N asparagine          2.8          9           1
 P proline             5.5         18           2
 Q glutamine           4.6         15           1
 R arginine            5.5         18           2
 S serine              7.0         23           2
 T threonine           5.5         18           2
 V valine             10.1         33           2
 W tryptophan          1.5          5           1
 Y tyrosine            2.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DHDPS-like protein isoform 1 
DHDPSL                0.279   DHDPS-like protein isoform 2 
NPL                   0.091   N-acetylneuraminate pyruvate lyase 
LOC647166             0.009   PREDICTED: similar to hCG28707 
SYNE1                 0.008   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.008   spectrin repeat containing, nuclear envelope 1 isof...
OBSCN                 0.008   obscurin, cytoskeletal calmodulin and titin-interac...
LOC646603             0.008   hypothetical LOC646603 
HUWE1                 0.005   HECT, UBA and WWE domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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