Guide to the Human Genome
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Name: WDR74 Sequence: fasta or formatted (385aa) NCBI GI: 221219004
Description:

WD repeat domain 74

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         27           5
 C cysteine            2.6         10           1
 D aspartate           5.5         21           1
 E glutamate           6.0         23           2
 F phenylalanine       1.6          6           1
 G glycine            10.4         40           2
 H histidine           2.9         11           1
 I isoleucine          2.9         11           1
 K lysine              4.9         19           3
 L leucine            10.9         42           3
 M methionine          1.3          5           1
 N asparagine          3.1         12           1
 P proline             6.2         24           1
 Q glutamine           6.2         24           1
 R arginine            7.8         30           3
 S serine              4.7         18           2
 T threonine           6.0         23           2
 V valine              6.5         25           2
 W tryptophan          2.3          9           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 74 
WDR61                 0.034   WD repeat domain 61 
TAF5                  0.022   TBP-associated factor 5 
TRAF7                 0.021   TNF receptor-associated factor 7 
KATNB1                0.019   katanin p80 subunit B 1 
SNRNP40               0.019   WD repeat domain 57 (U5 snRNP specific) 
EML6                  0.018   echinoderm microtubule associated protein like 6 [H...
RPTOR                 0.018   raptor isoform 1 
RPTOR                 0.018   raptor isoform 2 
TLE3                  0.018   transducin-like enhancer protein 3 isoform b 
TAF5L                 0.018   PCAF associated factor 65 beta isoform a 
TLE3                  0.018   transducin-like enhancer protein 3 isoform c 
TLE3                  0.018   transducin-like enhancer protein 3 isoform a 
NUP43                 0.017   nucleoporin 43kDa 
PRPF4                 0.017   PRP4 pre-mRNA processing factor 4 homolog 
WDR51A                0.015   WD repeat domain 51A isoform 2 
WDR51A                0.015   WD repeat domain 51A isoform 1 
TLE4                  0.015   transducin-like enhancer protein 4 
WDR12                 0.015   WD repeat domain 12 protein 
NEDD1                 0.015   neural precursor cell expressed, developmentally do...
NEDD1                 0.015   neural precursor cell expressed, developmentally do...
NEDD1                 0.015   neural precursor cell expressed, developmentally dow...
NEDD1                 0.015   neural precursor cell expressed, developmentally do...
EML5                  0.015   echinoderm microtubule associated protein like 5 [Ho...
WDR36                 0.014   WD repeat domain 36 
WDR51A                0.014   WD repeat domain 51A isoform 3 
TLE2                  0.014   transducin-like enhancer protein 2 isoform 3 
TLE2                  0.014   transducin-like enhancer protein 2 isoform 2 
TLE2                  0.014   transducin-like enhancer protein 2 isoform 1 
WDR85                 0.014   WD repeat domain 85 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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