Guide to the Human Genome
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Name: CAD Sequence: fasta or formatted (2225aa) NCBI GI: 18105007
Description:

carbamoylphosphate synthetase 2/aspartate transcarbamylase/dihydroorotase

Referenced in:

Pyrimidine Biosynthesis and Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7        194           3
 C cysteine            1.8         41           2
 D aspartate           4.1         91           2
 E glutamate           6.8        152           2
 F phenylalanine       3.5         78           2
 G glycine             7.9        176           2
 H histidine           2.8         63           2
 I isoleucine          4.3         96           2
 K lysine              3.8         85           3
 L leucine            10.5        233           3
 M methionine          2.3         52           2
 N asparagine          2.6         57           2
 P proline             6.6        147           4
 Q glutamine           4.3         95           2
 R arginine            5.5        123           2
 S serine              6.5        144           3
 T threonine           5.8        130           3
 V valine              8.6        192           3
 W tryptophan          0.9         20           1
 Y tyrosine            2.5         56           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbamoylphosphate synthetase 2/aspartate transcarba... 
CPS1                  0.319   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  0.319   carbamoyl-phosphate synthetase 1 isoform b precursor...
CPS1                  0.230   carbamoyl-phosphate synthetase 1 isoform c 
OTC                   0.016   ornithine carbamoyltransferase precursor 
PC                    0.012   pyruvate carboxylase precursor 
PC                    0.012   pyruvate carboxylase precursor 
PC                    0.012   pyruvate carboxylase precursor 
ACACA                 0.010   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.010   acetyl-Coenzyme A carboxylase alpha isoform 4 
ACACA                 0.010   acetyl-Coenzyme A carboxylase alpha isoform 3 
ACACA                 0.010   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.010   acetyl-Coenzyme A carboxylase alpha isoform 1 
ACACB                 0.009   acetyl-Coenzyme A carboxylase beta 
PCCA                  0.009   propionyl-Coenzyme A carboxylase, alpha polypeptide ...
PCCA                  0.009   propionyl-Coenzyme A carboxylase, alpha polypeptide...
DPYSL4                0.007   dihydropyrimidinase-like 4 
MCCC1                 0.007   methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) pr...
DPYSL5                0.006   dihydropyrimidinase-like 5 
DPYSL3                0.005   dihydropyrimidinase-like 3 
DPYSL2                0.005   dihydropyrimidinase-like 2 
WASL                  0.005   Wiskott-Aldrich syndrome gene-like protein 
DPYS                  0.004   dihydropyrimidinase 
CRMP1                 0.004   collapsin response mediator protein 1 isoform 1 [Hom...
CRMP1                 0.004   collapsin response mediator protein 1 isoform 2 [Homo...
LOC100132247          0.004   hypothetical protein LOC100132247 
LOC653548             0.004   PREDICTED: double homeobox, 4-like 
LOC441056             0.004   PREDICTED: double homeobox, 4-like 
DUX4                  0.004   double homeobox, 4 
LOC728410             0.004   double homeobox, 4-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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