NTN1 4597

Name: NTN1	Sequence: fasta or formatted (604aa)		NCBI GI: 148613884
Description: netrin 1		Referenced in: Netrins and Laminins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 53 2 C cysteine 6.8 41 1 D aspartate 6.5 39 2 E glutamate 3.8 23 2 F phenylalanine 3.0 18 1 G glycine 6.3 38 2 H histidine 3.1 19 1 I isoleucine 3.5 21 2 K lysine 7.3 44 2 L leucine 5.8 35 3 M methionine 1.7 10 2 N asparagine 4.1 25 2 P proline 5.8 35 2 Q glutamine 3.8 23 2 R arginine 8.1 49 2 S serine 6.6 40 2 T threonine 4.8 29 2 V valine 5.3 32 2 W tryptophan 1.7 10 2 Y tyrosine 3.3 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 netrin 1 NTN3 0.511 netrin 3 LAMC1 0.329 laminin, gamma 1 precursor NTN5 0.285 netrin 5 LAMC3 0.283 laminin, gamma 3 precursor NTN4 0.214 netrin 4 LAMA3 0.182 laminin alpha 3 subunit isoform 1 LAMA3 0.182 laminin alpha 3 subunit isoform 3 LAMB1 0.180 laminin, beta 1 precursor LAMA5 0.180 laminin alpha 5 LAMA1 0.176 laminin, alpha 1 precursor LAMB2 0.175 laminin, beta 2 precursor LAMB4 0.174 laminin, beta 4 LAMA2 0.174 laminin alpha 2 subunit isoform b precursor LAMA2 0.174 laminin alpha 2 subunit isoform a precursor NTNG1 0.170 netrin G1 isoform 1 LAMB3 0.156 laminin, beta 3 precursor LAMB3 0.156 laminin, beta 3 precursor LAMB3 0.156 laminin, beta 3 precursor NTNG2 0.141 netrin G2 USH2A 0.135 usherin isoform B USH2A 0.135 usherin isoform A NTNG1 0.118 netrin G1 isoform 3 NTNG1 0.117 netrin G1 isoform 2 LAMC2 0.054 laminin, gamma 2 isoform b precursor LAMC2 0.054 laminin, gamma 2 isoform a precursor LAMA3 0.054 laminin alpha 3 subunit isoform 4 LAMA3 0.054 laminin alpha 3 subunit isoform 2 MEGF9 0.049 multiple EGF-like-domains 9 HSPG2 0.046 heparan sulfate proteoglycan 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.