Guide to the Human Genome
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Name: SPP2 Sequence: fasta or formatted (211aa) NCBI GI: 5902118
Description:

secreted phosphoprotein 2, 24kDa precursor

Referenced in:

Bone and Related Tissues
Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         10           1
 C cysteine            2.4          5           1
 D aspartate           5.2         11           1
 E glutamate           5.7         12           2
 F phenylalanine       4.7         10           1
 G glycine             4.3          9           1
 H histidine           1.9          4           1
 I isoleucine          4.3          9           1
 K lysine              3.3          7           1
 L leucine             7.1         15           1
 M methionine          5.7         12           3
 N asparagine          4.7         10           2
 P proline             3.3          7           2
 Q glutamine           2.8          6           2
 R arginine            9.0         19           2
 S serine             14.2         30           3
 T threonine           3.8          8           2
 V valine              6.6         14           2
 W tryptophan          1.4          3           1
 Y tyrosine            4.7         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   secreted phosphoprotein 2, 24kDa precursor 
KNG1                  0.022   kininogen 1 isoform 2 
KNG1                  0.022   kininogen 1 isoform 1 
CST7                  0.020   cystatin F 
CAMP                  0.012   cathelicidin antimicrobial peptide 
CEP110                0.012   centrosomal protein 110kDa 
FAM190A               0.012   KIAA1680 protein isoform 2 
FAM190A               0.012   KIAA1680 protein isoform 1 
TTC14                 0.010   tetratricopeptide repeat domain 14 isoform a 
SMCR8                 0.007   Smith-Magenis syndrome chromosome region, candidate...
FRMD4B                0.007   FERM domain containing 4B 
LOC729815             0.005   PREDICTED: hypothetical protein 
LOC729815             0.005   PREDICTED: hypothetical protein 
SIPA1L1               0.005   signal-induced proliferation-associated 1 like 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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