Guide to the Human Genome
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Name: CST9L Sequence: fasta or formatted (147aa) NCBI GI: 18104940
Description:

cystatin 9-like precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1          6           1
 C cysteine            3.4          5           1
 D aspartate           4.1          6           2
 E glutamate           6.8         10           1
 F phenylalanine       7.5         11           2
 G glycine             5.4          8           2
 H histidine           4.8          7           1
 I isoleucine          3.4          5           1
 K lysine              4.1          6           1
 L leucine            14.3         21           6
 M methionine          2.7          4           1
 N asparagine          4.8          7           2
 P proline             2.0          3           1
 Q glutamine           4.8          7           2
 R arginine            4.1          6           1
 S serine              6.1          9           1
 T threonine           7.5         11           1
 V valine              3.4          5           1
 W tryptophan          3.4          5           1
 Y tyrosine            3.4          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cystatin 9-like precursor 
CST9                  0.293   cystatin 9 precursor 
CST2                  0.138   cystatin SA precursor 
CSTL1                 0.134   cystatin-like 1 precursor 
CST11                 0.117   cystatin 11 isoform 1 precursor 
CST3                  0.114   cystatin C precursor 
CST4                  0.110   cystatin S precursor 
CST1                  0.103   cystatin SN precursor 
CST5                  0.093   cystatin D precursor 
CST8                  0.083   cystatin 8 precursor 
LOC100291521          0.066   PREDICTED: hypothetical protein XP_002348052 
LOC100289308          0.066   PREDICTED: hypothetical protein XP_002344215 
LOC100131368          0.066   PREDICTED: similar to hCG1783157 
CST7                  0.066   cystatin F 
CST11                 0.055   cystatin 11 isoform 2 precursor 
CST6                  0.028   cystatin M precursor 
CYP4F12               0.014   cytochrome P450, family 4, subfamily F, polypeptide...
TBC1D22A              0.010   TBC1 domain family, member 22A 
FUT8                  0.007   fucosyltransferase 8 isoform a 
FUT8                  0.007   fucosyltransferase 8 isoform a 
FUT8                  0.007   fucosyltransferase 8 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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