Guide to the Human Genome
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Name: FBXL6 Sequence: fasta or formatted (539aa) NCBI GI: 16306576
Description:

F-box and leucine-rich repeat protein 6 isoform 1

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [533aa] F-box and leucine-rich repeat protein 6 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         52           4
 C cysteine            3.5         19           2
 D aspartate           2.4         13           1
 E glutamate           5.2         28           2
 F phenylalanine       1.9         10           1
 G glycine             7.6         41           2
 H histidine           2.0         11           1
 I isoleucine          1.7          9           1
 K lysine              3.2         17           2
 L leucine            16.1         87           2
 M methionine          1.5          8           1
 N asparagine          1.7          9           1
 P proline             9.1         49           2
 Q glutamine           4.8         26           1
 R arginine            8.3         45           3
 S serine              8.7         47           2
 T threonine           4.5         24           2
 V valine              5.0         27           2
 W tryptophan          2.2         12           3
 Y tyrosine            0.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and leucine-rich repeat protein 6 isoform 1 [H... 
FBXL6                 0.982   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL7                 0.052   F-box and leucine-rich repeat protein 7 
FBXL4                 0.041   F-box and leucine-rich repeat protein 4 
FBXL20                0.037   F-box and leucine-rich repeat protein 20 
FBXL14                0.035   F-box and leucine-rich repeat protein 14 
FBXL2                 0.035   F-box and leucine-rich repeat protein 2 
FBXL13                0.025   F-box and leucine-rich repeat protein 13 isoform 2 ...
FBXL13                0.025   F-box and leucine-rich repeat protein 13 isoform 1 ...
SKP2                  0.024   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.024   S-phase kinase-associated protein 2 isoform 2 
FBXL8                 0.021   F-box and leucine-rich repeat protein 8 
FBXL16                0.020   F-box and leucine-rich repeat protein 16 
GNAS                  0.019   GNAS complex locus XLas 
FBXL15                0.019   F-box and leucine-rich repeat protein 15 
NLRC5                 0.016   nucleotide-binding oligomerization domains 27 [Homo...
NFATC4                0.015   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.015   nuclear factor of activated T-cells, cytoplasmic, ca...
LRRC47                0.015   leucine rich repeat containing 47 
FBXL19                0.015   F-box and leucine-rich repeat protein 19 
LOC100128074          0.014   PREDICTED: hypothetical protein 
SLC16A10              0.014   solute carrier family 16, member 10 
FBXO27                0.014   F-box protein 27 
LOC729370             0.014   PREDICTED: hypothetical protein 
MAP7                  0.014   microtubule-associated protein 7 
TAF4                  0.014   TBP-associated factor 4 
BAT2                  0.014   HLA-B associated transcript-2 
PTPN23                0.014   protein tyrosine phosphatase, non-receptor type 23 [...
FBXO11                0.014   F-box only protein 11 isoform 1 
FBXO11                0.014   F-box only protein 11 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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