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Search of human proteins with 20162564
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20162564 tripartite motif-containing 40 [Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20162564 tripartite motif-containing 40 [Homo sapiens] 466 e-132
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi... 100 1e-21
gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapi... 100 1e-21
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 94 7e-20
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 94 7e-20
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 94 7e-20
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 94 7e-20
gi|149193331 tripartite motif protein 15 [Homo sapiens] 90 1e-18
gi|5454014 tripartite motif-containing 38 [Homo sapiens] 90 1e-18
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 89 3e-18
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi... 87 1e-17
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 87 1e-17
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 87 1e-17
gi|112421127 tripartite motif-containing 58 [Homo sapiens] 87 1e-17
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 86 2e-17
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 86 2e-17
gi|62865604 tripartite motif protein 31 [Homo sapiens] 85 4e-17
gi|37622899 ring finger protein 137 [Homo sapiens] 84 1e-16
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 83 2e-16
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 83 2e-16
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 83 2e-16
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s... 82 4e-16
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 75 4e-14
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 75 4e-14
gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 75 4e-14
gi|117938316 tripartite motif-containing 22 [Homo sapiens] 74 1e-13
gi|20270353 tripartite motif-containing 43 [Homo sapiens] 73 2e-13
gi|5730009 ret finger protein [Homo sapiens] 73 2e-13
gi|56605981 tripartite motif-containing 72 [Homo sapiens] 73 2e-13
gi|88953346 PREDICTED: Tripartite motif-containing protein 43-li... 72 4e-13
>gi|20162564 tripartite motif-containing 40 [Homo sapiens]
Length = 229
Score = 466 bits (1200), Expect = e-132
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC 60
MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
Sbjct: 1 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC 60
Query: 61 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR 120
SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
Sbjct: 61 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR 120
Query: 121 RSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEHMPAEAARILDISRAVTQLRSLVIDL 180
RSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEHMPAEAARILDISRAVTQLRSLVIDL
Sbjct: 121 RSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEHMPAEAARILDISRAVTQLRSLVIDL 180
Query: 181 ERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVSELLLQPPQKL 229
ERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVSELLLQPPQKL
Sbjct: 181 ERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVSELLLQPPQKL 229
>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
sapiens]
Length = 481
Score = 100 bits (248), Expect = 1e-21
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 45/249 (18%)
Query: 10 EEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVE--KASASGVFCCPLCRKP-------- 59
+E CPICQ +L+E V+ +CGH FCR CLT++ E CPLC++P
Sbjct: 12 DEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSFRP 71
Query: 60 ----------------CSEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHH 103
S LG +C H +++ FCE+ + LCV C + EH +H
Sbjct: 72 NWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVVCREAGEHATHT 131
Query: 104 ELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQAL--------QQWLGQLEH 155
+E+A + Y+E++++ + LRK+ E+Q +++++ K++Q L QQ + + H
Sbjct: 132 MRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTKRQQVISEFAH 191
Query: 156 MPAEAARILDISRAV--TQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQ 213
+ + L+ +++ QL S D+ R E D L AG++ SA +E + +
Sbjct: 192 L----RKFLEEQQSILLAQLESQDGDILRQRDEFD---LLVAGEICRFSA--LIEELEEK 242
Query: 214 LEKGVSELL 222
E+ ELL
Sbjct: 243 NERPARELL 251
>gi|157426896 tripartite motif-containing 10 isoform 2 [Homo
sapiens]
Length = 395
Score = 100 bits (248), Expect = 1e-21
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 45/249 (18%)
Query: 10 EEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVE--KASASGVFCCPLCRKP-------- 59
+E CPICQ +L+E V+ +CGH FCR CLT++ E CPLC++P
Sbjct: 12 DEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSFRP 71
Query: 60 ----------------CSEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHH 103
S LG +C H +++ FCE+ + LCV C + EH +H
Sbjct: 72 NWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVVCREAGEHATHT 131
Query: 104 ELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQAL--------QQWLGQLEH 155
+E+A + Y+E++++ + LRK+ E+Q +++++ K++Q L QQ + + H
Sbjct: 132 MRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTKRQQVISEFAH 191
Query: 156 MPAEAARILDISRAV--TQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQ 213
+ + L+ +++ QL S D+ R E D L AG++ SA +E + +
Sbjct: 192 L----RKFLEEQQSILLAQLESQDGDILRQRDEFD---LLVAGEICRFSA--LIEELEEK 242
Query: 214 LEKGVSELL 222
E+ ELL
Sbjct: 243 NERPARELL 251
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 94.4 bits (233), Expect = 7e-20
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 56/256 (21%)
Query: 3 PLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKA--SASGVFCCPLCR--- 57
P+ D +EE CPIC E L E +S +CGH FC+ C+T + ++ G CP+C+
Sbjct: 4 PVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSY 63
Query: 58 ---------------KPCSEEVLGTG-----YICPNHQKRVCRFCEESRLLLCVECLVSP 97
+ E VLG G +C +H +++ FC+E ++C C S
Sbjct: 64 QPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQ 123
Query: 98 EHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKA-QQEKKL------------- 143
EH HH +E Y+E+ +KL+ + E ++L A +EKK
Sbjct: 124 EHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 183
Query: 144 ------------QALQQWLGQLEHMPAEAARIL-----DISRAVTQLRSLVIDLERTAKE 186
+ Q+ L +LE + RI+ D+ LR L+ DLER +
Sbjct: 184 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 243
Query: 187 LDTNTLKNAGDLLNRS 202
L++ D+ RS
Sbjct: 244 STMELLQDVSDVTERS 259
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 94.4 bits (233), Expect = 7e-20
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 56/256 (21%)
Query: 3 PLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKA--SASGVFCCPLCR--- 57
P+ D +EE CPIC E L E +S +CGH FC+ C+T + ++ G CP+C+
Sbjct: 32 PVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSY 91
Query: 58 ---------------KPCSEEVLGTG-----YICPNHQKRVCRFCEESRLLLCVECLVSP 97
+ E VLG G +C +H +++ FC+E ++C C S
Sbjct: 92 QPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQ 151
Query: 98 EHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKA-QQEKKL------------- 143
EH HH +E Y+E+ +KL+ + E ++L A +EKK
Sbjct: 152 EHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 211
Query: 144 ------------QALQQWLGQLEHMPAEAARIL-----DISRAVTQLRSLVIDLERTAKE 186
+ Q+ L +LE + RI+ D+ LR L+ DLER +
Sbjct: 212 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 271
Query: 187 LDTNTLKNAGDLLNRS 202
L++ D+ RS
Sbjct: 272 STMELLQDVSDVTERS 287
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 94.4 bits (233), Expect = 7e-20
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 39/253 (15%)
Query: 6 KDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVL 65
+D QEE CPIC + ++ VS CGH FCR CL H A G F CP CR P + L
Sbjct: 4 EDIQEELTCPICLDYFQDPVSIECGHNFCRGCL--HRNWAPGGGPFPCPECRHPSAPAAL 61
Query: 66 GTGY--------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
+ +C H + + FCE+ + +C+ C S EH +H
Sbjct: 62 RPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAMA 121
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLE----HMPAEAA 161
I+ A Y+E+L + R L +A+++++ Q+ +++ QW +++ + E +
Sbjct: 122 PIDEAFESYREKLLKSQRNL---VAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFS 178
Query: 162 RILD--ISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVS 219
++ + + L+ L + E T K+L+ NTLK LN++ ++I EK +
Sbjct: 179 KLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLK-----LNQTIASLKKLILEVGEKSQA 233
Query: 220 ---ELLLQPPQKL 229
ELL P + L
Sbjct: 234 PTLELLQNPKEVL 246
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 94.4 bits (233), Expect = 7e-20
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 56/256 (21%)
Query: 3 PLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKA--SASGVFCCPLCR--- 57
P+ D +EE CPIC E L E +S +CGH FC+ C+T + ++ G CP+C+
Sbjct: 32 PVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSY 91
Query: 58 ---------------KPCSEEVLGTG-----YICPNHQKRVCRFCEESRLLLCVECLVSP 97
+ E VLG G +C +H +++ FC+E ++C C S
Sbjct: 92 QPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQ 151
Query: 98 EHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKA-QQEKKL------------- 143
EH HH +E Y+E+ +KL+ + E ++L A +EKK
Sbjct: 152 EHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 211
Query: 144 ------------QALQQWLGQLEHMPAEAARIL-----DISRAVTQLRSLVIDLERTAKE 186
+ Q+ L +LE + RI+ D+ LR L+ DLER +
Sbjct: 212 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 271
Query: 187 LDTNTLKNAGDLLNRS 202
L++ D+ RS
Sbjct: 272 STMELLQDVSDVTERS 287
Score = 82.8 bits (203), Expect = 2e-16
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 25/154 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKA--SASGVFCCPLCRKPCSEEVLG 66
QEE CPIC E L E +S +CGH CR C+T ++A S G CP+C S E L
Sbjct: 364 QEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQ 423
Query: 67 TGY-----------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHH 103
+C +H +++ FC+E R ++C C S EH HH
Sbjct: 424 ANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGHH 483
Query: 104 ELTIENALSHYKERLNRRSRKLRKDIAELQRLKA 137
+ E +E+L ++L+K+ E ++L+A
Sbjct: 484 TVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEA 517
>gi|149193331 tripartite motif protein 15 [Homo sapiens]
Length = 465
Score = 90.1 bits (222), Expect = 1e-18
Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 21/236 (8%)
Query: 3 PLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLT--QHVEKASASGVFCCPLCRKPC 60
P K E C +C L++AV+ CGH FCR+CL + S+ + CPLC++
Sbjct: 5 PSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEE 64
Query: 61 SEEV---------LGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENAL 111
E LG Y C H +++ FCE LCV C P H +H ++ A+
Sbjct: 65 QAETPMAPVPLGPLGETY-CEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLDEAI 123
Query: 112 SHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEHMPAEAARILDISRAVT 171
Y++RL R L + E++ +K Q+++KLQ L + +H A L + +
Sbjct: 124 QPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERL--QQELE 181
Query: 172 QLRSLVI----DLERTA-KELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVSELL 222
Q R L++ +LE+ KE D K + ++ A +++ + + ++ SELL
Sbjct: 182 QQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGA--QVKELEEKCQQPASELL 235
>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
Length = 465
Score = 90.1 bits (222), Expect = 1e-18
Identities = 67/254 (26%), Positives = 105/254 (41%), Gaps = 51/254 (20%)
Query: 6 KDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGV----FCCPLCRKPCS 61
K EE C IC + VS NCGH +C +C+T + S + FCCP CR P
Sbjct: 8 KKMMEEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFH 67
Query: 62 EEVLGTG----------------YICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
+ L C H ++ FCE+ L+C C +P+H H
Sbjct: 68 MDSLRPNKQLGSLIEALKETDQEMSCEEHGEQFHLFCEDEGQLICWRCERAPQHKGHTTA 127
Query: 106 TIENALSHYKERLNRRSRKLR--------------------KDIAELQRLKAQQE-KKLQ 144
+E+ YKE+L + KL+ K+ ++QR K + + K LQ
Sbjct: 128 LVEDVCQGYKEKLQKAVTKLKQLEDRCTEQKLSTAMRITKWKEKVQIQRQKIRSDFKNLQ 187
Query: 145 AL-----QQWLGQLEHMPAEA-ARILDISRAV----TQLRSLVIDLERTAKELDTNTLKN 194
+ +L +LE + +R+ D + +L+S +++LE + L+N
Sbjct: 188 CFLHEEEKSYLWRLEKEEQQTLSRLRDYEAGLGLKSNELKSHILELEEKCQGSAQKLLQN 247
Query: 195 AGDLLNRSAPQKLE 208
D L+RS KLE
Sbjct: 248 VNDTLSRSWAVKLE 261
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 89.0 bits (219), Expect = 3e-18
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 28/166 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTG 68
Q E C IC + L + V+ CGH FCR C+ Q +F CP+CR C E +
Sbjct: 11 QAEAKCSICLDYLSDPVTIECGHNFCRSCIQQ--SWLDLQELFPCPVCRHQCQEGHFRSN 68
Query: 69 Y--------------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSH 102
+C H + + FC+E ++LC C P+H H
Sbjct: 69 TQLGRMIEIAKLLQSTKSNKRKQEETTLCEKHNQPLSVFCKEDLMVLCPLCTQPPDHQGH 128
Query: 103 HELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQ 148
H IE A HY++R + L+K +A+LQ+L + Q KK L++
Sbjct: 129 HVRPIEKAAIHYRKRFCSYIQPLKKQLADLQKLISTQSKKPLELRE 174
>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
sapiens]
Length = 343
Score = 87.0 bits (214), Expect = 1e-17
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 41/260 (15%)
Query: 2 IPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASAS-------GVFCCP 54
+ L + QEE C IC + + V T CGH FCR C+ EKA G F CP
Sbjct: 4 VELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCP 63
Query: 55 LCRKPCSEEVLGTGYI-------------------CPNHQKRVCRFCEESRLLLCVECLV 95
CR+ + L + C H + + FC++ + +CV C
Sbjct: 64 ECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRE 123
Query: 96 SPEHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEH 155
S EH H L E A+ YK +L LR+ I L+A++E Q+L +W G+++
Sbjct: 124 SREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREE---QSLAEWQGKVKE 180
Query: 156 ------MPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEV 209
+ E + + L++L + E TA + L+ + L+R LE+
Sbjct: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETA-----SRLRESVACLDRQG-HSLEL 234
Query: 210 IYPQLEKGVSELLLQPPQKL 229
+ QLE+ ++ LQ Q +
Sbjct: 235 LLLQLEERSTQGPLQMLQDM 254
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 87.0 bits (214), Expect = 1e-17
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 41/260 (15%)
Query: 2 IPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASAS-------GVFCCP 54
+ L + QEE C IC + + V T CGH FCR C+ EKA G F CP
Sbjct: 4 VELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCP 63
Query: 55 LCRKPCSEEVLGTGYI-------------------CPNHQKRVCRFCEESRLLLCVECLV 95
CR+ + L + C H + + FC++ + +CV C
Sbjct: 64 ECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRE 123
Query: 96 SPEHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEH 155
S EH H L E A+ YK +L LR+ I L+A++E Q+L +W G+++
Sbjct: 124 SREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREE---QSLAEWQGKVKE 180
Query: 156 ------MPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEV 209
+ E + + L++L + E TA + L+ + L+R LE+
Sbjct: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETA-----SRLRESVACLDRQG-HSLEL 234
Query: 210 IYPQLEKGVSELLLQPPQKL 229
+ QLE+ ++ LQ Q +
Sbjct: 235 LLLQLEERSTQGPLQMLQDM 254
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 87.0 bits (214), Expect = 1e-17
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 41/260 (15%)
Query: 2 IPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASAS-------GVFCCP 54
+ L + QEE C IC + + V T CGH FCR C+ EKA G F CP
Sbjct: 4 VELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCP 63
Query: 55 LCRKPCSEEVLGTGYI-------------------CPNHQKRVCRFCEESRLLLCVECLV 95
CR+ + L + C H + + FC++ + +CV C
Sbjct: 64 ECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRE 123
Query: 96 SPEHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEH 155
S EH H L E A+ YK +L LR+ I L+A++E Q+L +W G+++
Sbjct: 124 SREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREE---QSLAEWQGKVKE 180
Query: 156 ------MPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEV 209
+ E + + L++L + E TA + L+ + L+R LE+
Sbjct: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETA-----SRLRESVACLDRQG-HSLEL 234
Query: 210 IYPQLEKGVSELLLQPPQKL 229
+ QLE+ ++ LQ Q +
Sbjct: 235 LLLQLEERSTQGPLQMLQDM 254
>gi|112421127 tripartite motif-containing 58 [Homo sapiens]
Length = 486
Score = 87.0 bits (214), Expect = 1e-17
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASAS--GVFCCPLCRKPC------ 60
+E+ CP+C + L+E VS +CGH FC C+++ EK+ + GV+ CP CR P
Sbjct: 11 REDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQGGVYACPQCRGPFRPSGFR 70
Query: 61 ----------SEEVLGTGY-----ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
S LG G C H + + RFCEE LC C PEH +H
Sbjct: 71 PNRQLAGLVESVRRLGLGAGPGARRCARHGEDLSRFCEEDEAALCWVCDAGPEHRTHRTA 130
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKK 142
++ A Y+ +L +RK++ + +A KK
Sbjct: 131 PLQEAAGSYQVKLQMALELMRKELEDALTQEANVGKK 167
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 86.3 bits (212), Expect = 2e-17
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 25/157 (15%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTG 68
Q E C +C E LKE V CGH FC+ C+T+ E F CP+CRK L
Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERD--FPCPVCRKTSRYRSLRPN 81
Query: 69 -----------------------YICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
+CP H + + FC E + +C+ C +S H +H +
Sbjct: 82 RQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVV 141
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKK 142
+++A YKE+L + L + + E+ R K+ +EKK
Sbjct: 142 PLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKK 178
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 86.3 bits (212), Expect = 2e-17
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 25/157 (15%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTG 68
Q E C +C E LKE V CGH FC+ C+T+ E F CP+CRK L
Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERD--FPCPVCRKTSRYRSLRPN 81
Query: 69 -----------------------YICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
+CP H + + FC E + +C+ C +S H +H +
Sbjct: 82 RQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVV 141
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKK 142
+++A YKE+L + L + + E+ R K+ +EKK
Sbjct: 142 PLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKK 178
>gi|62865604 tripartite motif protein 31 [Homo sapiens]
Length = 425
Score = 85.1 bits (209), Expect = 4e-17
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTG 68
QEE +CPIC + L++ V+ +CGH FC C+TQ E ++ G F CPLC+ + +
Sbjct: 11 QEEVICPICLDILQKPVTIDCGHNFCLKCITQIGE--TSCGFFKCPLCKTSVRKNAIRFN 68
Query: 69 YI------------------------CPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHE 104
+ CP HQ+ FCE+ LC C S +H SH+
Sbjct: 69 SLLRNLVEKIQALQASEVQSKRKEATCPRHQEMFHYFCEDDGKFLCFVCRESKDHKSHNV 128
Query: 105 LTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEHMPAEAARIL 164
IE A +Y+ ++ + + L++ E ++KAQ ++ + Q+EH E RIL
Sbjct: 129 SLIEEAAQNYQGQIQEQIQVLQQKEKETVQVKAQGVHRVDV---FTDQVEH---EKQRIL 182
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 83.6 bits (205), Expect = 1e-16
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 10 EEGVCPICQESLKEAVSTNCGHLFCRVCLTQ--HVEKASASGVFCCPLCRKPCSEEVLGT 67
EE CPIC L+E +S +CGH FC CL+ + S + + CPLCR P L
Sbjct: 12 EEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRNLRP 71
Query: 68 -----------------------GYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHE 104
G +C H +++ FC+E L++C C SPEH +H
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEHEAHSV 131
Query: 105 LTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKK 142
+ +E+ YK L+ L+K+ E +L+ + K+
Sbjct: 132 VPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKR 169
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 82.8 bits (203), Expect = 2e-16
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 25/154 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKA--SASGVFCCPLCRKPCSEEVLG 66
QEE CPIC E L E +S +CGH CR C+T ++A S G CP+C S E L
Sbjct: 10 QEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQ 69
Query: 67 TGY-----------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHH 103
+C +H +++ FC+E R ++C C S EH HH
Sbjct: 70 ANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGHH 129
Query: 104 ELTIENALSHYKERLNRRSRKLRKDIAELQRLKA 137
+ E +E+L ++L+K+ E ++L+A
Sbjct: 130 TVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEA 163
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 82.8 bits (203), Expect = 2e-16
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 25/154 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKA--SASGVFCCPLCRKPCSEEVLG 66
QEE CPIC E L E +S +CGH CR C+T ++A S G CP+C S E L
Sbjct: 10 QEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQ 69
Query: 67 TGY-----------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHH 103
+C +H +++ FC+E R ++C C S EH HH
Sbjct: 70 ANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGHH 129
Query: 104 ELTIENALSHYKERLNRRSRKLRKDIAELQRLKA 137
+ E +E+L ++L+K+ E ++L+A
Sbjct: 130 TVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEA 163
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 82.8 bits (203), Expect = 2e-16
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 25/154 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKA--SASGVFCCPLCRKPCSEEVLG 66
QEE CPIC E L E +S +CGH CR C+T ++A S G CP+C S E L
Sbjct: 10 QEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQ 69
Query: 67 TGY-----------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHH 103
+C +H +++ FC+E R ++C C S EH HH
Sbjct: 70 ANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGHH 129
Query: 104 ELTIENALSHYKERLNRRSRKLRKDIAELQRLKA 137
+ E +E+L ++L+K+ E ++L+A
Sbjct: 130 TVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEA 163
>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
sapiens]
Length = 500
Score = 82.0 bits (201), Expect = 4e-16
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 59/276 (21%)
Query: 6 KDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVL 65
+D QEE CPIC + ++ VS CGH FCR CL H A G F CP CR P + L
Sbjct: 4 EDIQEELTCPICLDYFQDPVSIECGHNFCRGCL--HRNWAPGGGPFPCPECRHPSAPAAL 61
Query: 66 GTGY--------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
+ +C H + + FCE+ + +C+ C S EH +H
Sbjct: 62 RPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAMA 121
Query: 106 TIENALSHY------------KERL-------NRRSRKLRKD----IAELQRLKAQQEKK 142
I+ A Y K RL +++ KL K +A+++++ Q+ +
Sbjct: 122 PIDEAFESYRTGNFDIHVDEWKRRLIRLLLYHSKQEEKLLKSQRNLVAKMKKVMHLQDVE 181
Query: 143 LQALQQWLGQLE----HMPAEAARILD--ISRAVTQLRSLVIDLERTAKELDTNTLKNAG 196
++ QW +++ + E +++ + + L+ L + E T K+L+ NTLK
Sbjct: 182 VKNATQWKDKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLK--- 238
Query: 197 DLLNRSAPQKLEVIYPQLEKGVS---ELLLQPPQKL 229
LN++ ++I EK + ELL P + L
Sbjct: 239 --LNQTIASLKKLILEVGEKSQAPTLELLQNPKEVL 272
>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
sapiens]
Length = 493
Score = 75.5 bits (184), Expect = 4e-14
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLT-QHVEKASASGVFCCPLCRKPCS-EEVLG 66
+EE CPIC E L + +S +CGH FC+ CLT H + G CP+CR E +
Sbjct: 10 KEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRP 69
Query: 67 TGYI---------------------CPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
++ C H +++ FC+E ++C C S EH HH
Sbjct: 70 NRHVANLVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTF 129
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQRLKAQ-QEKKLQALQQWLGQLEH 155
E Y+ +L LR+ E + L+A +E+K W Q+++
Sbjct: 130 PTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEK----ASWKTQIQY 176
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 75.5 bits (184), Expect = 4e-14
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLT-QHVEKASASGVFCCPLCRKPCS-EEVLG 66
+EE CPIC E L + +S +CGH FC+ CLT H + G CP+CR E +
Sbjct: 10 KEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRP 69
Query: 67 TGYI---------------------CPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
++ C H +++ FC+E ++C C S EH HH
Sbjct: 70 NRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTF 129
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQRLKAQ-QEKKLQALQQWLGQLEH 155
E Y+ +L LR+ E + L+A +E+K W Q+++
Sbjct: 130 LTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEK----ASWKTQIQY 176
>gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo
sapiens]
Length = 347
Score = 75.5 bits (184), Expect = 4e-14
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLT-QHVEKASASGVFCCPLCRKPCS-EEVLG 66
+EE CPIC E L + +S +CGH FC+ CLT H + G CP+CR E +
Sbjct: 10 KEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRP 69
Query: 67 TGYI---------------------CPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
++ C H +++ FC+E ++C C S EH HH
Sbjct: 70 NRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTF 129
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQRLKAQ-QEKKLQALQQWLGQLEH 155
E Y+ +L LR+ E + L+A +E+K W Q+++
Sbjct: 130 LTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEK----ASWKTQIQY 176
>gi|117938316 tripartite motif-containing 22 [Homo sapiens]
Length = 498
Score = 73.6 bits (179), Expect = 1e-13
Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 56/252 (22%)
Query: 7 DNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKA--SASGVFCCPLCRK------ 58
D ++E CPIC E L E +S +CGH FC+ C+T ++++ + G CP+C+
Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
Query: 59 -----------------PCSEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMS 101
S + +C +H K++ FC+E ++C C +S EH
Sbjct: 68 LRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWVCELSQEHQG 127
Query: 102 HHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWL----------- 150
H I + +E+L ++L K+ E ++L+ ++ A + ++
Sbjct: 128 HQTFRINEVVKECQEKLQVALQRLIKEDQEAEKLEDDIRQERTAWKNYIQIERQKILKGF 187
Query: 151 ------------GQLEHMPAEAARILD-ISRAVTQL-------RSLVIDLERTAKELDTN 190
+L+ + +LD ++ A QL +L+ DL+R +
Sbjct: 188 NEMRVILDNEEQRELQKLEEGEVNVLDNLAAATDQLVQQRQDASTLISDLQRRLRGSSVE 247
Query: 191 TLKNAGDLLNRS 202
L++ D++ RS
Sbjct: 248 MLQDVIDVMKRS 259
>gi|20270353 tripartite motif-containing 43 [Homo sapiens]
Length = 446
Score = 73.2 bits (178), Expect = 2e-13
Identities = 48/149 (32%), Positives = 66/149 (44%), Gaps = 25/149 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTG 68
Q+E C IC L + V+ CGH FCR CL E+A + CP CR+P + T
Sbjct: 10 QKELTCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPAN--CPACREPSPKMDFKTN 67
Query: 69 Y-----------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
IC H++ FC+ + LLC+ C S EH +H
Sbjct: 68 ILLKNLVTIARKASLWQFLSSEKQICGTHRQTKKMFCDMDKSLLCLLCSNSQEHGAHKHH 127
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQR 134
IE A ++E+L ++ R L K I E QR
Sbjct: 128 PIEEAAEEHREKLLKQMRILWKKIQENQR 156
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 72.8 bits (177), Expect = 2e-13
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 58/250 (23%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVL--- 65
Q+E CP+C + E + +CGH C CL + A + CP CR+ + +
Sbjct: 11 QQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETN--VSCPQCRETFPQRHMRPN 68
Query: 66 ----------------------GTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHH 103
G +C H++ + +CEE ++ +CV C S EH H
Sbjct: 69 RHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDRSREHRGHS 128
Query: 104 ELTIENALSHYKERLNRRSRKLR--KDIAELQRLKAQQ-------------EKKLQALQQ 148
L +E A+ +KE++ + L+ KD+ + +R + +Q EK + +Q
Sbjct: 129 VLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMEREKIVWEFEQ 188
Query: 149 WLGQL-EHMPAEAARILD--------ISRAVTQ-------LRSLVIDLERTAKELDTNTL 192
L EH AR+ + I+ A+TQ L SL+ LE ++ L
Sbjct: 189 LYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQQQPTRELL 248
Query: 193 KNAGDLLNRS 202
++ GD L+R+
Sbjct: 249 QDIGDTLSRA 258
>gi|56605981 tripartite motif-containing 72 [Homo sapiens]
Length = 477
Score = 72.8 bits (177), Expect = 2e-13
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 10 EEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTGY 69
+E CP+C + V+ CGH FCR CL + + +A G CP C+ P + L T
Sbjct: 10 QELSCPLCLQLFDAPVTAECGHSFCRACLGRVAGEPAADGTVLCPCCQAPTRPQALSTNL 69
Query: 70 ---------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHY 114
C H + +CE+ R L+C C H H L A +
Sbjct: 70 QLARLVEGLAQVPQGHCEEHLDPLSIYCEQDRALVCGVCASLGSHRGHRLLPAAEAHARL 129
Query: 115 KERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEHMPAEAARILDISRAVTQLR 174
K +L ++ +L++ ++ A E +L +++ + Q E + + A +
Sbjct: 130 KTQLPQQKLQLQEACMRKEKSVAVLEHQLVEVEETVRQFRGAVGEQLGKMRVFLAALE-G 188
Query: 175 SLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVSELLLQP 225
SL + ER E + G L S ++L Q+EK + E+ +P
Sbjct: 189 SLDCEAERVRGEAGVALRRELGSL--NSYLEQLR----QMEKVLEEVADKP 233
>gi|88953346 PREDICTED: Tripartite motif-containing protein 43-like
protein 1 [Homo sapiens]
Length = 446
Score = 72.0 bits (175), Expect = 4e-13
Identities = 48/149 (32%), Positives = 65/149 (43%), Gaps = 25/149 (16%)
Query: 9 QEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTG 68
Q+E C IC L + V+ CGH FCR CL E+A + CP CR+P + T
Sbjct: 10 QKELTCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPAN--CPACREPSPKMDFKTN 67
Query: 69 Y-----------------------ICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHEL 105
IC H++ FC+ + LLC+ C S EH +H
Sbjct: 68 ILLKNLVTIARKASLWQFLSSEKQICGTHRQTKKMFCDMDKSLLCLLCSNSQEHGAHKHY 127
Query: 106 TIENALSHYKERLNRRSRKLRKDIAELQR 134
IE A +E+L ++ R L K I E QR
Sbjct: 128 PIEEAAEEDREKLLKQMRILWKKIQENQR 156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,032,138
Number of Sequences: 37866
Number of extensions: 402198
Number of successful extensions: 3387
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 333
Number of HSP's that attempted gapping in prelim test: 2603
Number of HSP's gapped (non-prelim): 1005
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.