TRIM43 11955

Name: TRIM43	Sequence: fasta or formatted (446aa)		NCBI GI: 20270353
Description: tripartite motif-containing 43		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 18 2 C cysteine 3.8 17 2 D aspartate 4.3 19 1 E glutamate 7.4 33 2 F phenylalanine 5.6 25 2 G glycine 3.8 17 1 H histidine 4.5 20 2 I isoleucine 4.0 18 1 K lysine 6.3 28 2 L leucine 11.2 50 3 M methionine 2.9 13 1 N asparagine 5.2 23 2 P proline 4.5 20 1 Q glutamine 4.3 19 2 R arginine 6.3 28 2 S serine 7.4 33 2 T threonine 3.6 16 2 V valine 6.1 27 2 W tryptophan 2.5 11 1 Y tyrosine 2.5 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 43 LOC653192 0.980 PREDICTED: Tripartite motif-containing protein 43-li... LOC283116 0.667 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.479 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.479 PREDICTED: similar to ring finger protein 18 LOC283116 0.479 PREDICTED: similar to ring finger protein 18 LOC653111 0.475 PREDICTED: similar to ring finger protein 18 TRIM49 0.473 ring finger protein 18 SPRYD5 0.470 SPRY domain containing 5 LOC729384 0.457 hypothetical protein LOC729384 LOC100134006 0.457 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.457 PREDICTED: similar to ring finger protein 18 LOC100131392 0.457 PREDICTED: similar to ring finger protein 18 LOC399939 0.457 PREDICTED: similar to ring finger protein 18 LOC120824 0.456 PREDICTED: similar to hCG1802386 LOC120824 0.456 PREDICTED: similar to hCG1802386 LOC120824 0.455 PREDICTED: similar to hCG1802386 TRIM64 0.440 tripartite motif-containing 64 LOC100289112 0.439 PREDICTED: hypothetical protein XP_002343148 TRIM77 0.439 tripartite motif-containing 77 LOC642446 0.437 PREDICTED: tripartite motif-containing protein 64B-... LOC646754 0.426 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.426 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.426 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.417 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.417 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.417 PREDICTED: tripartite motif-containing protein 64C-... TRIM77 0.402 PREDICTED: tripartite motif-containing 77 TRIM77 0.402 PREDICTED: tripartite motif-containing 77 TRIM53 0.343 tripartite motif-containing 53 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.