LOC653192 36725

Name: LOC653192	Sequence: fasta or formatted (446aa)		NCBI GI: 88953346
Description: PREDICTED: Tripartite motif-containing protein 43-like protein 1		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 18 2 C cysteine 3.8 17 2 D aspartate 4.5 20 1 E glutamate 7.6 34 2 F phenylalanine 5.6 25 2 G glycine 3.6 16 1 H histidine 4.0 18 1 I isoleucine 4.0 18 1 K lysine 6.3 28 2 L leucine 11.4 51 3 M methionine 2.9 13 1 N asparagine 4.9 22 2 P proline 4.5 20 1 Q glutamine 4.3 19 2 R arginine 6.5 29 2 S serine 7.4 33 2 T threonine 3.6 16 2 V valine 6.1 27 2 W tryptophan 2.2 10 1 Y tyrosine 2.7 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: Tripartite motif-containing protein 43-li... TRIM43 0.986 tripartite motif-containing 43 LOC283116 0.661 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.471 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.471 PREDICTED: similar to ring finger protein 18 LOC283116 0.471 PREDICTED: similar to ring finger protein 18 LOC653111 0.467 PREDICTED: similar to ring finger protein 18 SPRYD5 0.465 SPRY domain containing 5 TRIM49 0.465 ring finger protein 18 LOC120824 0.453 PREDICTED: similar to hCG1802386 LOC120824 0.453 PREDICTED: similar to hCG1802386 LOC120824 0.452 PREDICTED: similar to hCG1802386 LOC729384 0.449 hypothetical protein LOC729384 LOC100134006 0.449 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.449 PREDICTED: similar to ring finger protein 18 LOC100131392 0.449 PREDICTED: similar to ring finger protein 18 LOC399939 0.449 PREDICTED: similar to ring finger protein 18 TRIM64 0.443 tripartite motif-containing 64 LOC642446 0.439 PREDICTED: tripartite motif-containing protein 64B-... LOC100289112 0.435 PREDICTED: hypothetical protein XP_002343148 TRIM77 0.435 tripartite motif-containing 77 LOC646754 0.428 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.428 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.428 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.421 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.421 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.421 PREDICTED: tripartite motif-containing protein 64C-... TRIM77 0.404 PREDICTED: tripartite motif-containing 77 TRIM77 0.404 PREDICTED: tripartite motif-containing 77 LOC642612 0.344 PREDICTED: similar to tripartite motif protein 39 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.