| Name: C1orf56 | Sequence: fasta or formatted (341aa) | NCBI GI: 20149646 | |
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Description: hypothetical protein LOC54964
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.2 28 3 C cysteine 2.6 9 1 D aspartate 3.5 12 1 E glutamate 5.3 18 2 F phenylalanine 1.8 6 1 G glycine 6.7 23 2 H histidine 1.5 5 1 I isoleucine 2.9 10 2 K lysine 1.8 6 1 L leucine 10.0 34 3 M methionine 2.3 8 1 N asparagine 2.9 10 1 P proline 9.4 32 2 Q glutamine 3.5 12 2 R arginine 8.8 30 1 S serine 13.2 45 3 T threonine 10.0 34 4 V valine 2.9 10 2 W tryptophan 2.1 7 1 Y tyrosine 0.6 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC54964 LOC100134147 0.030 PREDICTED: hypothetical protein RSPH3 0.024 radial spoke 3 homolog SETD1A 0.022 SET domain containing 1A LOC100128719 0.022 PREDICTED: hypothetical protein, partial LOC100128719 0.022 PREDICTED: hypothetical protein, partial PER1 0.022 period 1 MUC12 0.022 PREDICTED: mucin 12 CXorf67 0.022 hypothetical protein LOC340602 LOC342346 0.021 hypothetical protein LOC342346 MUC16 0.019 mucin 16 LOC100130716 0.019 PREDICTED: similar to mucin 11 LOC100130716 0.019 PREDICTED: similar to Mucin-12 MUC12 0.019 PREDICTED: mucin 12, cell surface associated PTPRZ1 0.018 protein tyrosine phosphatase, receptor-type, zeta1 p... BAI2 0.018 brain-specific angiogenesis inhibitor 2 MUC5AC 0.016 mucin 5AC LDB3 0.016 LIM domain binding 3 isoform 1 MUC6 0.016 mucin 6, gastric OTX1 0.015 orthodenticle homeobox 1 BAIAP2L2 0.015 BAI1-associated protein 2-like 2 MUC7 0.015 mucin 7, secreted precursor LOC100133756 0.015 PREDICTED: hypothetical protein, partial MUC7 0.015 mucin 7, secreted precursor MUC7 0.015 mucin 7, secreted precursor BAT2 0.015 HLA-B associated transcript-2 MUC2 0.013 mucin 2 precursor FGD1 0.013 faciogenital dysplasia protein CCDC52 0.013 coiled-coil domain containing 52 C1orf113 0.013 SH3 domain-containing protein C1orf113 isoform 1 [H...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
