PER1 10866

Name: PER1	Sequence: fasta or formatted (1290aa)		NCBI GI: 194097341
Description: period 1		Referenced in: Circadian Rhythms
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 114 2 C cysteine 2.1 27 2 D aspartate 4.6 59 3 E glutamate 6.2 80 5 F phenylalanine 2.4 31 1 G glycine 8.8 113 3 H histidine 2.4 31 2 I isoleucine 2.0 26 2 K lysine 2.9 37 2 L leucine 8.8 114 3 M methionine 1.3 17 2 N asparagine 1.7 22 1 P proline 11.6 150 4 Q glutamine 4.9 63 2 R arginine 6.0 77 2 S serine 13.0 168 4 T threonine 5.3 68 2 V valine 4.7 61 2 W tryptophan 0.5 7 1 Y tyrosine 1.9 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 period 1 PER2 0.341 period 2 PER3 0.231 period 3 FLJ22184 0.021 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.021 PREDICTED: hypothetical protein FLJ22184 ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.019 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.019 aryl hydrocarbon receptor nuclear translocator isofor... FLJ22184 0.019 PREDICTED: hypothetical protein LOC80164 ARNTL2 0.018 aryl hydrocarbon receptor nuclear translocator-like ... SHANK1 0.018 SH3 and multiple ankyrin repeat domains 1 ARNT2 0.017 aryl hydrocarbon receptor nuclear translocator 2 [Ho... MAMSTR 0.017 MEF2 activating motif and SAP domain containing tra... MAMSTR 0.017 MEF2 activating motif and SAP domain containing tran... RERE 0.017 atrophin-1 like protein isoform b RERE 0.017 atrophin-1 like protein isoform a RERE 0.017 atrophin-1 like protein isoform a WIPF3 0.016 WAS/WASL interacting protein family, member 3 [Homo... PTPN23 0.016 protein tyrosine phosphatase, non-receptor type 23 [... MNT 0.016 MAX binding protein NACA 0.016 nascent polypeptide-associated complex alpha subuni... SCAF1 0.016 SR-related CTD-associated factor 1 RAPH1 0.015 Ras association and pleckstrin homology domains 1 is... MLL2 0.015 myeloid/lymphoid or mixed-lineage leukemia 2 WNK2 0.015 WNK lysine deficient protein kinase 2 SRCAP 0.015 Snf2-related CBP activator protein PRR12 0.015 proline rich 12 BRD4 0.015 bromodomain-containing protein 4 isoform long Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.