CCDC52 13127

Name: CCDC52	Sequence: fasta or formatted (855aa)		NCBI GI: 21389501
Description: coiled-coil domain containing 52		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 46 3 C cysteine 0.7 6 1 D aspartate 3.6 31 1 E glutamate 9.4 80 3 F phenylalanine 2.1 18 1 G glycine 4.1 35 1 H histidine 2.0 17 1 I isoleucine 4.4 38 2 K lysine 5.8 50 4 L leucine 9.9 85 2 M methionine 1.9 16 1 N asparagine 6.3 54 2 P proline 6.2 53 2 Q glutamine 7.0 60 2 R arginine 7.0 60 3 S serine 9.2 79 2 T threonine 6.9 59 2 V valine 6.3 54 2 W tryptophan 1.1 9 1 Y tyrosine 0.6 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 52 MYH13 0.012 myosin, heavy polypeptide 13, skeletal muscle [Homo... CCDC88A 0.010 coiled-coil domain containing 88A isoform 2 CCDC88A 0.010 coiled-coil domain containing 88A isoform 1 PDE4DIP 0.010 phosphodiesterase 4D interacting protein isoform 2 [... PDE4DIP 0.010 phosphodiesterase 4D interacting protein isoform 5 [... PDE4DIP 0.010 phosphodiesterase 4D interacting protein isoform 1 ... MYH7 0.010 myosin, heavy chain 7, cardiac muscle, beta CCDC158 0.010 coiled-coil domain containing 158 CENPF 0.009 centromere protein F AKAP9 0.009 A-kinase anchor protein 9 isoform 2 AKAP9 0.009 A-kinase anchor protein 9 isoform 3 MYH11 0.009 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.009 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.009 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.009 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... ANKFN1 0.008 ankyrin-repeat and fibronectin type III domain cont... AKAP12 0.008 A kinase (PRKA) anchor protein 12 isoform 1 CDK5RAP2 0.008 CDK5 regulatory subunit associated protein 2 isoform... CDK5RAP2 0.008 CDK5 regulatory subunit associated protein 2 isoform... CENPJ 0.008 centromere protein J CGN 0.008 cingulin KIF7 0.008 kinesin family member 7 TMF1 0.007 TATA element modulatory factor 1 NPAT 0.007 nuclear protein, ataxia-telangiectasia locus [Homo... GOLGA4 0.007 golgi autoantigen, golgin subfamily a, 4 CCDC46 0.007 coiled-coil domain containing 46 isoform a FGFR1OP2 0.007 FGFR1 oncogene partner 2 HMMR 0.007 hyaluronan-mediated motility receptor isoform d [Ho... HMMR 0.007 hyaluronan-mediated motility receptor isoform a [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.