Guide to the Human Genome
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Name: PTPRZ1 Sequence: fasta or formatted (2315aa) NCBI GI: 91208428
Description:

protein tyrosine phosphatase, receptor-type, zeta1 precursor

Referenced in:

Carbonic Anhydrases
Protein Glycosylation
Protein Tyrosine Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5        128           2
 C cysteine            1.0         22           1
 D aspartate           5.8        135           6
 E glutamate           7.4        171           4
 F phenylalanine       3.8         87           1
 G glycine             5.4        126           3
 H histidine           2.8         64           1
 I isoleucine          5.3        122           2
 K lysine              4.7        109           2
 L leucine             8.3        192           3
 M methionine          1.8         42           2
 N asparagine          4.8        110           2
 P proline             5.6        129           2
 Q glutamine           4.3         99           2
 R arginine            2.5         58           2
 S serine             12.5        289           3
 T threonine           7.4        172           3
 V valine              7.0        163           3
 W tryptophan          0.8         19           1
 Y tyrosine            3.4         78           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, receptor-type, zeta1 p... 
PTPRG                 0.210   protein tyrosine phosphatase, receptor type, G prec...
PTPRD                 0.087   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.087   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.087   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.087   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.087   protein tyrosine phosphatase, receptor type, D isofo...
PTPRF                 0.087   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.087   protein tyrosine phosphatase, receptor type, F isof...
PTPRS                 0.084   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.084   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.084   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.084   protein tyrosine phosphatase, receptor type, sigma ...
PTPRA                 0.084   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.084   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.083   protein tyrosine phosphatase, receptor type, A isofor...
PTPRT                 0.081   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.081   protein tyrosine phosphatase, receptor type, T isof...
PTPRE                 0.077   protein tyrosine phosphatase, receptor type, E isofor...
PTPRE                 0.077   protein tyrosine phosphatase, receptor type, E isofo...
PTPRM                 0.077   protein tyrosine phosphatase, receptor type, M isof...
PTPRM                 0.077   protein tyrosine phosphatase, receptor type, M isof...
PTPRK                 0.076   protein tyrosine phosphatase, receptor type, K isofo...
PTPRK                 0.075   protein tyrosine phosphatase, receptor type, K isof...
PTPRU                 0.070   protein tyrosine phosphatase, receptor type, U isof...
PTPRU                 0.070   protein tyrosine phosphatase, receptor type, U isof...
PTPRU                 0.069   protein tyrosine phosphatase, receptor type, U isof...
PTPRC                 0.065   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.065   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.065   protein tyrosine phosphatase, receptor type, C isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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