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Search of human proteins with 198442878
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
sapiens]
(343 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi... 702 0.0
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 601 e-172
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 601 e-172
gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens] 547 e-156
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 264 1e-70
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 219 2e-57
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s... 206 2e-53
gi|5730009 ret finger protein [Homo sapiens] 196 3e-50
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 196 3e-50
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 195 4e-50
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 187 9e-48
gi|112421127 tripartite motif-containing 58 [Homo sapiens] 183 2e-46
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 171 7e-43
gi|15208660 tripartite motif protein 21 [Homo sapiens] 171 1e-42
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 168 6e-42
gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 168 6e-42
gi|37622899 ring finger protein 137 [Homo sapiens] 168 6e-42
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 160 2e-39
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 160 2e-39
gi|22749269 ring finger protein 129 [Homo sapiens] 160 2e-39
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 160 2e-39
gi|5454014 tripartite motif-containing 38 [Homo sapiens] 158 8e-39
gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens] 156 2e-38
gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens] 156 2e-38
gi|20270353 tripartite motif-containing 43 [Homo sapiens] 154 8e-38
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 151 9e-37
gi|88953346 PREDICTED: Tripartite motif-containing protein 43-li... 149 5e-36
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 148 8e-36
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 148 8e-36
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 148 8e-36
>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
sapiens]
Length = 343
Score = 702 bits (1811), Expect = 0.0
Identities = 343/343 (100%), Positives = 343/343 (100%)
Query: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF
Sbjct: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
Query: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV
Sbjct: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
Query: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE
Sbjct: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
Query: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE
Sbjct: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
Query: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKWAPR 300
ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKWAPR
Sbjct: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKWAPR 300
Query: 301 ARTSDPGSLGDAPLYPLASEATNGGGSTSALPGDGHWLFTVPS 343
ARTSDPGSLGDAPLYPLASEATNGGGSTSALPGDGHWLFTVPS
Sbjct: 301 ARTSDPGSLGDAPLYPLASEATNGGGSTSALPGDGHWLFTVPS 343
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 601 bits (1550), Expect = e-172
Identities = 297/306 (97%), Positives = 299/306 (97%)
Query: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF
Sbjct: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
Query: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV
Sbjct: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
Query: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE
Sbjct: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
Query: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE
Sbjct: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
Query: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKWAPR 300
ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFL P
Sbjct: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLEDVVPD 300
Query: 301 ARTSDP 306
A ++ P
Sbjct: 301 ATSAYP 306
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 601 bits (1550), Expect = e-172
Identities = 297/306 (97%), Positives = 299/306 (97%)
Query: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF
Sbjct: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
Query: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV
Sbjct: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
Query: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE
Sbjct: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
Query: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE
Sbjct: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
Query: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKWAPR 300
ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFL P
Sbjct: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLEDVVPD 300
Query: 301 ARTSDP 306
A ++ P
Sbjct: 301 ATSAYP 306
>gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens]
Length = 450
Score = 547 bits (1410), Expect = e-156
Identities = 270/279 (96%), Positives = 272/279 (97%)
Query: 28 MTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQRNLLPNRLLTKVAEMA 87
MTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQRNLLPNRLLTKVAEMA
Sbjct: 1 MTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQRNLLPNRLLTKVAEMA 60
Query: 88 QQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLE 147
QQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLE
Sbjct: 61 QQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLE 120
Query: 148 EDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQAL 207
EDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQAL
Sbjct: 121 EDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQAL 180
Query: 208 ETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQ 267
ETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQ
Sbjct: 181 ETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQ 240
Query: 268 CPEVAPPTRPRTVCRVPGQIEVLRGFLGKWAPRARTSDP 306
CPEVAPPTRPRTVCRVPGQIEVLRGFL P A ++ P
Sbjct: 241 CPEVAPPTRPRTVCRVPGQIEVLRGFLEDVVPDATSAYP 279
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 264 bits (674), Expect = 1e-70
Identities = 143/308 (46%), Positives = 188/308 (61%), Gaps = 12/308 (3%)
Query: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
M A +L+ LQEEATC+ICLDYFTDPVMT CGHNFCR CI+ W + +G +
Sbjct: 1 MAAPDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQP---------EGPY 51
Query: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQ--HPGLQKQDLCQEHHEPLKLFCQKDQSPIC 118
CPECRE+SPQRNL PNR L K+AEMA++ P Q +C H EPL FC + +C
Sbjct: 52 ACPECRELSPQRNLRPNRPLAKMAEMARRLHPPSPVPQGVCPAHREPLAAFCGDELRLLC 111
Query: 119 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV 178
C S EH HRV P ++A + K KLE+ +E+LR+Q+ QA+ +++ WQ V
Sbjct: 112 AACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMV 171
Query: 179 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ 238
+ +R+ ++ EFE++ L EEEQ+LLQ LE EE E RLRE A L +Q L L+ +
Sbjct: 172 ESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHLAELIAE 231
Query: 239 LEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKWA 298
LE R L +LQD+K+ L R +V +Q PEV P RTVCRVPG +E LR F G
Sbjct: 232 LEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVV-PMELRTVCRVPGLVETLRRFRGDVT 290
Query: 299 PRARTSDP 306
T++P
Sbjct: 291 LDPDTANP 298
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 219 bits (559), Expect = 2e-57
Identities = 119/292 (40%), Positives = 170/292 (58%), Gaps = 20/292 (6%)
Query: 7 ARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECR 66
A +QEE TC ICLDYF DPV CGHNFCR C+ +W G FPCPECR
Sbjct: 3 AEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGP---------FPCPECR 53
Query: 67 EMSPQRNLLPNRLLTKVAEMAQQHP-GLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESR 125
S L PN L ++ E Q+ G LC H EPL+LFC+ DQ P+C+VCRES+
Sbjct: 54 HPSAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQ 113
Query: 126 EHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERI 185
EH+ H + P +EA + Y+ KL + L ++ + +LQ E ++ +W+ K+K +R RI
Sbjct: 114 EHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRI 173
Query: 186 VLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQ 245
EF K++ +LVEEE LQ L EEEET +L E+ L++ SL+ L+L++ E+S
Sbjct: 174 STEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQA 233
Query: 246 GPLQMLQDMKEPLSRKN----NVSVQCPEVAPPTRPRTVCRVPGQIEVLRGF 293
L++LQ+ KE L+R N S++ +V +TVC++P E+L+ F
Sbjct: 234 PTLELLQNPKEVLTRSEIQDVNYSLEAVKV------KTVCQIPLMKEMLKRF 279
>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
sapiens]
Length = 500
Score = 206 bits (524), Expect = 2e-53
Identities = 119/318 (37%), Positives = 170/318 (53%), Gaps = 46/318 (14%)
Query: 7 ARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECR 66
A +QEE TC ICLDYF DPV CGHNFCR C+ +W G FPCPECR
Sbjct: 3 AEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGP---------FPCPECR 53
Query: 67 EMSPQRNLLPNRLLTKVAEMAQQHP-GLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESR 125
S L PN L ++ E Q+ G LC H EPL+LFC+ DQ P+C+VCRES+
Sbjct: 54 HPSAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQ 113
Query: 126 EHRLHRVLPAEEAVQGYKL--------------------------KLEEDMEYLREQITR 159
EH+ H + P +EA + Y+ KL + L ++ +
Sbjct: 114 EHQTHAMAPIDEAFESYRTGNFDIHVDEWKRRLIRLLLYHSKQEEKLLKSQRNLVAKMKK 173
Query: 160 TGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLR 219
+LQ E ++ +W+ K+K +R RI EF K++ +LVEEE LQ L EEEET +L
Sbjct: 174 VMHLQDVEVKNATQWKDKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLN 233
Query: 220 ESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKN----NVSVQCPEVAPPT 275
E+ L++ SL+ L+L++ E+S L++LQ+ KE L+R N S++ +V
Sbjct: 234 ENTLKLNQTIASLKKLILEVGEKSQAPTLELLQNPKEVLTRSEIQDVNYSLEAVKV---- 289
Query: 276 RPRTVCRVPGQIEVLRGF 293
+TVC++P E+L+ F
Sbjct: 290 --KTVCQIPLMKEMLKRF 305
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 196 bits (498), Expect = 3e-50
Identities = 106/281 (37%), Positives = 158/281 (56%), Gaps = 17/281 (6%)
Query: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
M + +A LQ+E TC +CL YF +P+M CGHN C AC+ W A + +
Sbjct: 1 MASGSVAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTA---------ETNV 51
Query: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQ-------HPGLQKQDLCQEHHEPLKLFCQKD 113
CP+CRE PQR++ PNR L V ++ +Q PG + +C++H EPLKL+C++D
Sbjct: 52 SCPQCRETFPQRHMRPNRHLANVTQLVKQLRTERPSGPG-GEMGVCEKHREPLKLYCEED 110
Query: 114 QSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAE 173
Q PICVVC SREHR H VLP EEAV+G+K +++ +++L+ +A+ EQ+ AE
Sbjct: 111 QMPICVVCDRSREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAE 170
Query: 174 WQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLE 233
+ RE+IV EFE++ L E E RLL LE + + + ++ L
Sbjct: 171 LLSLTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLS 230
Query: 234 LLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPP 274
L+ QLEE+ Q ++LQD+ + LSR + + P + PP
Sbjct: 231 SLIAQLEEKQQQPTRELLQDIGDTLSRAERIRIPEPWITPP 271
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 196 bits (497), Expect = 3e-50
Identities = 103/270 (38%), Positives = 158/270 (58%), Gaps = 19/270 (7%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMS 69
LQ EA+CS+CL+Y +PV+ CGHNFC+ACI WE + FPCP CR+ S
Sbjct: 23 LQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL---------ERDFPCPVCRKTS 73
Query: 70 PQRNLLPNRLLTKVAEMAQQHPGLQK----QDLCQEHHEPLKLFCQKDQSPICVVCRESR 125
R+L PNR L + E+A+Q +++ + LC +HHE L LFC +DQ +C++C S
Sbjct: 74 RYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISH 133
Query: 126 EHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERI 185
HR H V+P ++A Q YK KL++ +E L +++ ++ EE+ E + V+ RR++I
Sbjct: 134 THRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQI 193
Query: 186 VLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQ 245
+ EFE+++ L EE+Q LL LE EE++ RLRE+ A L + L L ++E + Q
Sbjct: 194 LREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQ 253
Query: 246 GPLQMLQDMKEPLSRK------NNVSVQCP 269
+ML+D+K L + ++S CP
Sbjct: 254 SGFEMLKDVKSTLEKNIPRKFGGSLSTICP 283
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 195 bits (496), Expect = 4e-50
Identities = 101/259 (38%), Positives = 154/259 (59%), Gaps = 13/259 (5%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMS 69
LQ EA+CS+CL+Y +PV+ CGHNFC+ACI WE + FPCP CR+ S
Sbjct: 23 LQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL---------ERDFPCPVCRKTS 73
Query: 70 PQRNLLPNRLLTKVAEMAQQHPGLQK----QDLCQEHHEPLKLFCQKDQSPICVVCRESR 125
R+L PNR L + E+A+Q +++ + LC +HHE L LFC +DQ +C++C S
Sbjct: 74 RYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISH 133
Query: 126 EHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERI 185
HR H V+P ++A Q YK KL++ +E L +++ ++ EE+ E + V+ RR++I
Sbjct: 134 THRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQI 193
Query: 186 VLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQ 245
+ EFE+++ L EE+Q LL LE EE++ RLRE+ A L + L L ++E + Q
Sbjct: 194 LREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQ 253
Query: 246 GPLQMLQDMKEPLSRKNNV 264
+ML+D+K L + V
Sbjct: 254 SGFEMLKDVKSTLEKCEKV 272
>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
Length = 511
Score = 187 bits (476), Expect = 9e-48
Identities = 117/314 (37%), Positives = 163/314 (51%), Gaps = 18/314 (5%)
Query: 2 EAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEK-ARGKKGRRKRKGSF 60
EA+ LA +LQ EATCSICL+ F +PV CGH+FCRACI WE+ G G R F
Sbjct: 15 EALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPF 74
Query: 61 P--CPECREMSPQRNLLPNRLLTKVAEMAQQH------PGLQKQDL---------CQEHH 103
P CP+CRE + L PNR L VA + ++ PG C +H
Sbjct: 75 PLPCPQCREPARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHG 134
Query: 104 EPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNL 163
EP KL+CQ D ICVVC +REHR H VLP +EAVQ K LE + L++++
Sbjct: 135 EPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVF 194
Query: 164 QAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVA 223
++ E++ E ++ +E++ EF+ + +LVE+E RLL LE E A + E++A
Sbjct: 195 RSTEKKESKELLKQMAAEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLA 254
Query: 224 CLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRV 283
L + L L Q++E + + L LQ+ K LSR +NV P V V
Sbjct: 255 QLGVEITQLSKLSSQIQETAQKPDLDFLQEFKSTLSRCSNVPGPKPTTVSSEMKNKVWNV 314
Query: 284 PGQIEVLRGFLGKW 297
+ VL+G L K+
Sbjct: 315 SLKTFVLKGMLKKF 328
>gi|112421127 tripartite motif-containing 58 [Homo sapiens]
Length = 486
Score = 183 bits (465), Expect = 2e-46
Identities = 104/291 (35%), Positives = 162/291 (55%), Gaps = 16/291 (5%)
Query: 9 KLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREM 68
+L+E+A C +CLD+ +PV CGH+FC CI EK+ G +G G + CP+CR
Sbjct: 9 RLREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQG-----GVYACPQCRGP 63
Query: 69 SPQRNLLPNRLLTKVAEMAQQ-----HPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRE 123
PNR L + E ++ PG ++ C H E L FC++D++ +C VC
Sbjct: 64 FRPSGFRPNRQLAGLVESVRRLGLGAGPGARR---CARHGEDLSRFCEEDEAALCWVCDA 120
Query: 124 SREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRE 183
EHR HR P +EA Y++KL+ +E +R+++ +A + W+ KV+ +R+
Sbjct: 121 GPEHRTHRTAPLQEAAGSYQVKLQMALELMRKELEDALTQEANVGKKTVIWKEKVEMQRQ 180
Query: 184 RIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERS 243
R LEFEK +L +EEQR L+ LE EE T RLRES + L +Q +L+ L +L+ER
Sbjct: 181 RFRLEFEKHRGFLAQEEQRQLRRLEAEERATLQRLRESKSRLVQQSKALKELADELQERC 240
Query: 244 TQGPLQMLQDMKEPLSRKNNVS-VQCPEVAPPTRPRTVCRVPGQIEVLRGF 293
+ L +L+ ++ LSR V+ ++ + P +T C +PG+ E+LR F
Sbjct: 241 QRPALGLLEGVRGVLSRSKAVTRLEAENI--PMELKTACCIPGRRELLRKF 289
>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
sapiens]
Length = 493
Score = 171 bits (434), Expect = 7e-43
Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 13/288 (4%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMS 69
++EE TC ICL+ T P+ CGH+FC+AC+ + +K+ KG CP CR
Sbjct: 9 VKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESS------CPVCRISY 62
Query: 70 PQRNLLPNRLLTKVAEMAQQ---HPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESRE 126
N+ PNR + + E ++ P QK D C H E L LFCQ+D IC +C S+E
Sbjct: 63 QPENIRPNRHVANLVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 127 HRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIV 186
HR H P EE Q Y++KL+ +E LR++ L+A + A W+ +++ + ++
Sbjct: 123 HRGHHTFPTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNVL 182
Query: 187 LEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQG 246
+FE++ L EE LQ LE EEE+ L S + +Q SL L+ LE R
Sbjct: 183 ADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQGS 242
Query: 247 PLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVP---GQIEVLR 291
+++LQ + + R NV+++ PE P + R V R P G +EV R
Sbjct: 243 VMELLQGVDGVIKRTENVTLKKPETFPKNQ-RRVFRAPDLKGMLEVFR 289
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 171 bits (432), Expect = 1e-42
Identities = 103/284 (36%), Positives = 154/284 (54%), Gaps = 16/284 (5%)
Query: 12 EEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQ 71
EE TC ICLD F +PV CGH+FC+ CI + +G G CP CR+
Sbjct: 12 EEVTCPICLDPFVEPVSIECGHSFCQECIS---QVGKG--------GGSVCPVCRQRFLL 60
Query: 72 RNLLPNRLLTKVA----EMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREH 127
+NL PNR L + E++Q+ + + C H E L LFC+KD +C VC +SR+H
Sbjct: 61 KNLRPNRQLANMVNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVCAQSRKH 120
Query: 128 RLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVL 187
R H ++P EEA Q Y+ KL+ + LR + L+ A+W+ V+ ++ RI
Sbjct: 121 RDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADWKKTVETQKSRIHA 180
Query: 188 EFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQGP 247
EF + +LVEEEQR LQ LE +E E L E A L +Q +L+ L+ +L+ R
Sbjct: 181 EFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQELISELDRRCHSSA 240
Query: 248 LQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLR 291
L++LQ++ L R + +++ ++ P R+VC VPG ++LR
Sbjct: 241 LELLQEVIIVLERSESWNLKDLDITSP-ELRSVCHVPGLKKMLR 283
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 168 bits (426), Expect = 6e-42
Identities = 99/288 (34%), Positives = 149/288 (51%), Gaps = 13/288 (4%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMS 69
++EE TC ICL+ T P+ CGH+FC+AC+ + +K+ KG CP CR
Sbjct: 9 VKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESS------CPVCRISY 62
Query: 70 PQRNLLPNRLLTKVAEMAQQ---HPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESRE 126
N+ PNR + + E ++ P QK D C H E L LFCQ+D IC +C S+E
Sbjct: 63 QPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 127 HRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIV 186
HR H EE Q Y++KL+ +E LR++ L+A + A W+ +++ + ++
Sbjct: 123 HRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNVL 182
Query: 187 LEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQG 246
+FE++ L EE LQ LE EEE+ L S + +Q SL L+ LE R
Sbjct: 183 ADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQGS 242
Query: 247 PLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVP---GQIEVLR 291
+++LQ + + R NV+++ PE P + R V R P G +EV R
Sbjct: 243 VMELLQGVDGVIKRTENVTLKKPETFPKNQ-RRVFRAPDLKGMLEVFR 289
>gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo
sapiens]
Length = 347
Score = 168 bits (426), Expect = 6e-42
Identities = 99/288 (34%), Positives = 149/288 (51%), Gaps = 13/288 (4%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMS 69
++EE TC ICL+ T P+ CGH+FC+AC+ + +K+ KG CP CR
Sbjct: 9 VKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESS------CPVCRISY 62
Query: 70 PQRNLLPNRLLTKVAEMAQQ---HPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESRE 126
N+ PNR + + E ++ P QK D C H E L LFCQ+D IC +C S+E
Sbjct: 63 QPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 127 HRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIV 186
HR H EE Q Y++KL+ +E LR++ L+A + A W+ +++ + ++
Sbjct: 123 HRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNVL 182
Query: 187 LEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQG 246
+FE++ L EE LQ LE EEE+ L S + +Q SL L+ LE R
Sbjct: 183 ADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQGS 242
Query: 247 PLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVP---GQIEVLR 291
+++LQ + + R NV+++ PE P + R V R P G +EV R
Sbjct: 243 VMELLQGVDGVIKRTENVTLKKPETFPKNQ-RRVFRAPDLKGMLEVFR 289
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 168 bits (426), Expect = 6e-42
Identities = 104/307 (33%), Positives = 160/307 (52%), Gaps = 20/307 (6%)
Query: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
M+ L + EE C IC+ + +P+ CGH+FC +C+ WE G + G +
Sbjct: 1 MDPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIP----GESQNWG-Y 55
Query: 61 PCPECREMSPQRNLLPNRLLTKVAE---MAQQHPGLQ-KQDLCQEHHEPLKLFCQKDQSP 116
CP CR RNL PN L V E + + HPG+ K DLC+ H E LK+FC++D
Sbjct: 56 TCPLCRAPVQPRNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLI 115
Query: 117 ICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQG 176
+C C +S EH H V+P E+ YK +L E +E+L+++ L+ E + A W+
Sbjct: 116 MCEACSQSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKI 175
Query: 177 KVKERRERIVLEFEKMNLYLVE----------EEQRLLQALETEEEETASRLRESVACLD 226
+V+ R++ IV EFEK L + E L +L+ E ET +L + + L
Sbjct: 176 QVETRKQSIVWEFEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNHSELI 235
Query: 227 RQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQ 286
+Q L ++ +L+ERS + MLQD++E L+R + S+Q PE +T CRV G
Sbjct: 236 QQSQVLWRMIAELKERSQRPVRWMLQDIQEVLNRSKSWSLQQPEPI-SLELKTDCRVLGL 294
Query: 287 IEVLRGF 293
E+L+ +
Sbjct: 295 REILKTY 301
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 160 bits (405), Expect = 2e-39
Identities = 99/287 (34%), Positives = 149/287 (51%), Gaps = 12/287 (4%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSW-EKARGKKGRRKRKGSFPCPECREM 68
++EE TC ICL+ T+P+ CGH+FC+ACI + E G++G R CP C+
Sbjct: 9 IREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERS------CPVCQTS 62
Query: 69 SPQRNLLPNRLLTKVAEMAQQ---HPGLQ-KQDLCQEHHEPLKLFCQKDQSPICVVCRES 124
NL PNR L + ++ PG Q K LC +H E L+LFCQ+D IC +C S
Sbjct: 63 YQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERS 122
Query: 125 REHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRER 184
+EHR H EE Q Y+ K +E ++ L+ + L A + W+ +++ R R
Sbjct: 123 QEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCR 182
Query: 185 IVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERST 244
I EF ++ L EQR L+ LE EE++ + E+ L Q SL L+ LE R
Sbjct: 183 IQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQ 242
Query: 245 QGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLR 291
+++LQD+ + R +++ PE A PT+ R++ R P +LR
Sbjct: 243 GSTMELLQDVSDVTERSEFWTLRKPE-ALPTKLRSMFRAPDLKRMLR 288
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 160 bits (405), Expect = 2e-39
Identities = 99/287 (34%), Positives = 149/287 (51%), Gaps = 12/287 (4%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSW-EKARGKKGRRKRKGSFPCPECREM 68
++EE TC ICL+ T+P+ CGH+FC+ACI + E G++G R CP C+
Sbjct: 37 IREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERS------CPVCQTS 90
Query: 69 SPQRNLLPNRLLTKVAEMAQQ---HPGLQ-KQDLCQEHHEPLKLFCQKDQSPICVVCRES 124
NL PNR L + ++ PG Q K LC +H E L+LFCQ+D IC +C S
Sbjct: 91 YQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERS 150
Query: 125 REHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRER 184
+EHR H EE Q Y+ K +E ++ L+ + L A + W+ +++ R R
Sbjct: 151 QEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCR 210
Query: 185 IVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERST 244
I EF ++ L EQR L+ LE EE++ + E+ L Q SL L+ LE R
Sbjct: 211 IQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQ 270
Query: 245 QGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLR 291
+++LQD+ + R +++ PE A PT+ R++ R P +LR
Sbjct: 271 GSTMELLQDVSDVTERSEFWTLRKPE-ALPTKLRSMFRAPDLKRMLR 316
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 160 bits (405), Expect = 2e-39
Identities = 92/278 (33%), Positives = 150/278 (53%), Gaps = 18/278 (6%)
Query: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
ME V LQEE++C ICL+Y DPV CGHNFCR+C+ +SW+ +F
Sbjct: 1 MEFVTALVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDL---------DDTF 51
Query: 61 PCPECREMSPQRNLLPN---RLLTKVAEMAQQHPGLQKQD----LCQEHHEPLKLFCQKD 113
PCP CR P ++ N R LT++A+ Q +K+ +C++H++ L LFC KD
Sbjct: 52 PCPVCRFCFPYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKD 111
Query: 114 QSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAE 173
+C C S +H+ H + P ++A ++ LE +E LR I R + + E
Sbjct: 112 LEILCTQCSFSTKHQKHYICPIKKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSVE 171
Query: 174 WQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLE 233
+ KV+ +RE I EFE++ L+L E++ +L+ ++ EE ++L E++ L +L+
Sbjct: 172 LKKKVEYKREEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLK 231
Query: 234 LLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEV 271
LL ++E +S Q L++L K + N ++CPE+
Sbjct: 232 HLLREVEGKSVQSNLELLTQAKSMHHKYQN--LKCPEL 267
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 160 bits (405), Expect = 2e-39
Identities = 99/287 (34%), Positives = 149/287 (51%), Gaps = 12/287 (4%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSW-EKARGKKGRRKRKGSFPCPECREM 68
++EE TC ICL+ T+P+ CGH+FC+ACI + E G++G R CP C+
Sbjct: 37 IREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERS------CPVCQTS 90
Query: 69 SPQRNLLPNRLLTKVAEMAQQ---HPGLQ-KQDLCQEHHEPLKLFCQKDQSPICVVCRES 124
NL PNR L + ++ PG Q K LC +H E L+LFCQ+D IC +C S
Sbjct: 91 YQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERS 150
Query: 125 REHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRER 184
+EHR H EE Q Y+ K +E ++ L+ + L A + W+ +++ R R
Sbjct: 151 QEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCR 210
Query: 185 IVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERST 244
I EF ++ L EQR L+ LE EE++ + E+ L Q SL L+ LE R
Sbjct: 211 IQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQ 270
Query: 245 QGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLR 291
+++LQD+ + R +++ PE A PT+ R++ R P +LR
Sbjct: 271 GSTMELLQDVSDVTERSEFWTLRKPE-ALPTKLRSMFRAPDLKRMLR 316
Score = 148 bits (373), Expect = 8e-36
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 3 AVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPC 62
A ++ +QEE TC ICL+ T+P+ CGH+ CRACI +S ++A G G C
Sbjct: 356 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMG-----GKSSC 410
Query: 63 PECREMSPQRNLLPNRLLTKVAEMAQQ----HPGLQKQDLCQEHHEPLKLFCQKDQSPIC 118
P C +L N+ L + E ++ +K+DLC H E L LFC++D+ IC
Sbjct: 411 PVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVIC 470
Query: 119 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV 178
+C S+EHR H + EE + + KL+ ++ L+++ L+A + W+ +V
Sbjct: 471 WLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQV 530
Query: 179 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ 238
+ R+RI EF+++ L EEQR LQ LE EE++T + E+ L +Q + L+
Sbjct: 531 QTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISD 590
Query: 239 LEERSTQGPLQMLQDM 254
+E RS +++LQDM
Sbjct: 591 VECRSQWSTMELLQDM 606
>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
Length = 465
Score = 158 bits (399), Expect = 8e-39
Identities = 91/283 (32%), Positives = 153/283 (54%), Gaps = 7/283 (2%)
Query: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
M + +K+ EEATCSICL T+PV CGH++C CI ++ K+ R++ +F
Sbjct: 1 MASTTSTKKMMEEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQE---TF 57
Query: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
CP+CR +L PN+ L + E ++ ++ C+EH E LFC+ + IC
Sbjct: 58 CCPQCRAPFHMDSLRPNKQLGSLIEALKE---TDQEMSCEEHGEQFHLFCEDEGQLICWR 114
Query: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
C + +H+ H E+ QGYK KL++ + L++ R + + +W+ KV+
Sbjct: 115 CERAPQHKGHTTALVEDVCQGYKEKLQKAVTKLKQLEDRCTEQKLSTAMRITKWKEKVQI 174
Query: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
+R++I +F+ + +L EEE+ L LE EE++T SRLR+ A L + + L+ +L+LE
Sbjct: 175 QRQKIRSDFKNLQCFLHEEEKSYLWRLEKEEQQTLSRLRDYEAGLGLKSNELKSHILELE 234
Query: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRV 283
E+ ++LQ++ + LSR V ++ E A T+C V
Sbjct: 235 EKCQGSAQKLLQNVNDTLSRSWAVKLETSE-AVSLELHTMCNV 276
>gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens]
Length = 518
Score = 156 bits (395), Expect = 2e-38
Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 60 FPCPECREMSPQRNLLPNRLLTKVAEMAQQ-HPG------LQKQDLCQEHHEPLKLFCQK 112
F CP+CR+ P+R+ PN L + ++ +Q HP + Q +C +H E LKLFC+
Sbjct: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
Query: 113 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLA 172
D+ ICVVCRESR H+ H V+P EE VQ YK KL+ +E LR+ + ++A+EE+ +
Sbjct: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
Query: 173 EWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSL 232
E + ++K + EF ++ +L EE+ L + L E R + + L Q L
Sbjct: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
Query: 233 ELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPP 274
LL + +ERS QG L++LQD+KE +R V +Q PEV P
Sbjct: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSP 402
Score = 63.9 bits (154), Expect = 2e-10
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSW 44
LQEEA C+ICLDYFTDPV CGHNFCR C+ W
Sbjct: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
>gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens]
Length = 630
Score = 156 bits (395), Expect = 2e-38
Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 60 FPCPECREMSPQRNLLPNRLLTKVAEMAQQ-HPG------LQKQDLCQEHHEPLKLFCQK 112
F CP+CR+ P+R+ PN L + ++ +Q HP + Q +C +H E LKLFC+
Sbjct: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
Query: 113 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLA 172
D+ ICVVCRESR H+ H V+P EE VQ YK KL+ +E LR+ + ++A+EE+ +
Sbjct: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
Query: 173 EWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSL 232
E + ++K + EF ++ +L EE+ L + L E R + + L Q L
Sbjct: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
Query: 233 ELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPP 274
LL + +ERS QG L++LQD+KE +R V +Q PEV P
Sbjct: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSP 402
Score = 63.9 bits (154), Expect = 2e-10
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSW 44
LQEEA C+ICLDYFTDPV CGHNFCR C+ W
Sbjct: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
>gi|20270353 tripartite motif-containing 43 [Homo sapiens]
Length = 446
Score = 154 bits (390), Expect = 8e-38
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 13/274 (4%)
Query: 5 ELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPE 64
+ + Q+E TC ICL+Y DPV CGH+FCR C+ LSWE+A+ CP
Sbjct: 4 DFSHAFQKELTCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPAN---------CPA 54
Query: 65 CREMSPQRNLLPNRLLTKVAEMAQQHPGLQ----KQDLCQEHHEPLKLFCQKDQSPICVV 120
CRE SP+ + N LL + +A++ Q ++ +C H + K+FC D+S +C++
Sbjct: 55 CREPSPKMDFKTNILLKNLVTIARKASLWQFLSSEKQICGTHRQTKKMFCDMDKSLLCLL 114
Query: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
C S+EH H+ P EEA + ++ KL + M L ++I E ++ W+G V
Sbjct: 115 CSNSQEHGAHKHHPIEEAAEEHREKLLKQMRILWKKIQENQRNLYEEGRTAFLWRGNVVL 174
Query: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
R + I E+ K++ L +EE++ L+ L E +E +L+ S +D++ L+ + +L
Sbjct: 175 RAQMIRNEYRKLHPVLHKEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQELM 234
Query: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPP 274
E + +++LQD+ + ++R +V + P+ P
Sbjct: 235 EMCHKPDVELLQDLGDIVARSESVLLHMPQPVNP 268
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 151 bits (381), Expect = 9e-37
Identities = 89/295 (30%), Positives = 149/295 (50%), Gaps = 19/295 (6%)
Query: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMS 69
LQ EA CSICLDY +DPV CGHNFCR+CIQ SW + FPCP CR
Sbjct: 10 LQAEAKCSICLDYLSDPVTIECGHNFCRSCIQQSWLDLQEL---------FPCPVCRHQC 60
Query: 70 PQRNLLPNRLLTKVAEMAQ----QHPGLQKQD---LCQEHHEPLKLFCQKDQSPICVVCR 122
+ + N L ++ E+A+ +KQ+ LC++H++PL +FC++D +C +C
Sbjct: 61 QEGHFRSNTQLGRMIEIAKLLQSTKSNKRKQEETTLCEKHNQPLSVFCKEDLMVLCPLCT 120
Query: 123 ESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERR 182
+ +H+ H V P E+A Y+ + ++ L++Q+ L + + + E + V+ +R
Sbjct: 121 QPPDHQGHHVRPIEKAAIHYRKRFCSYIQPLKKQLADLQKLISTQSKKPLELREMVENQR 180
Query: 183 ERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEER 242
+ + EFE +N +L E+Q +L L EE++ +L ++ +L+ L ++ E
Sbjct: 181 QELSSEFEHLNQFLDREQQAVLSRLAEEEKDNQQKLSANITAFSNYSATLKSQLSKVVEL 240
Query: 243 STQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKW 297
S L++L +K +N S P + R C P Q L+ + K+
Sbjct: 241 SELSELELLSQIKIFYESENESS---PSIFSIHLKRDGCSFPPQYSALQRIIKKF 292
>gi|88953346 PREDICTED: Tripartite motif-containing protein 43-like
protein 1 [Homo sapiens]
Length = 446
Score = 149 bits (375), Expect = 5e-36
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 13/274 (4%)
Query: 5 ELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPE 64
+ + Q+E TC ICL+Y DPV CGH+FCR C+ LSWE+A+ CP
Sbjct: 4 DFSHAFQKELTCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPAN---------CPA 54
Query: 65 CREMSPQRNLLPNRLLTKVAEMAQQHPGLQ----KQDLCQEHHEPLKLFCQKDQSPICVV 120
CRE SP+ + N LL + +A++ Q ++ +C H + K+FC D+S +C++
Sbjct: 55 CREPSPKMDFKTNILLKNLVTIARKASLWQFLSSEKQICGTHRQTKKMFCDMDKSLLCLL 114
Query: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
C S+EH H+ P EEA + + KL + M L ++I E ++ +G V
Sbjct: 115 CSNSQEHGAHKHYPIEEAAEEDREKLLKQMRILWKKIQENQRNLYEERRTAFLLRGDVVL 174
Query: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
R + I E+ K++ L +EE++ L+ L E +E +L+ S +D++ L+ + +L
Sbjct: 175 RAQMIRNEYRKLHPVLHKEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQELM 234
Query: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPP 274
E + +++LQD+ + ++R +V + P+ P
Sbjct: 235 EMCHKPEVELLQDLGDIVARSESVLLHMPQPVNP 268
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 148 bits (373), Expect = 8e-36
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 3 AVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPC 62
A ++ +QEE TC ICL+ T+P+ CGH+ CRACI +S ++A G G C
Sbjct: 2 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMG-----GKSSC 56
Query: 63 PECREMSPQRNLLPNRLLTKVAEMAQQ----HPGLQKQDLCQEHHEPLKLFCQKDQSPIC 118
P C +L N+ L + E ++ +K+DLC H E L LFC++D+ IC
Sbjct: 57 PVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVIC 116
Query: 119 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV 178
+C S+EHR H + EE + + KL+ ++ L+++ L+A + W+ +V
Sbjct: 117 WLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQV 176
Query: 179 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ 238
+ R+RI EF+++ L EEQR LQ LE EE++T + E+ L +Q + L+
Sbjct: 177 QTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISD 236
Query: 239 LEERSTQGPLQMLQDM 254
+E RS +++LQDM
Sbjct: 237 VECRSQWSTMELLQDM 252
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 148 bits (373), Expect = 8e-36
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 3 AVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPC 62
A ++ +QEE TC ICL+ T+P+ CGH+ CRACI +S ++A G G C
Sbjct: 2 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMG-----GKSSC 56
Query: 63 PECREMSPQRNLLPNRLLTKVAEMAQQ----HPGLQKQDLCQEHHEPLKLFCQKDQSPIC 118
P C +L N+ L + E ++ +K+DLC H E L LFC++D+ IC
Sbjct: 57 PVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVIC 116
Query: 119 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV 178
+C S+EHR H + EE + + KL+ ++ L+++ L+A + W+ +V
Sbjct: 117 WLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQV 176
Query: 179 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ 238
+ R+RI EF+++ L EEQR LQ LE EE++T + E+ L +Q + L+
Sbjct: 177 QTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISD 236
Query: 239 LEERSTQGPLQMLQDM 254
+E RS +++LQDM
Sbjct: 237 VECRSQWSTMELLQDM 252
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 148 bits (373), Expect = 8e-36
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 3 AVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPC 62
A ++ +QEE TC ICL+ T+P+ CGH+ CRACI +S ++A G G C
Sbjct: 2 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMG-----GKSSC 56
Query: 63 PECREMSPQRNLLPNRLLTKVAEMAQQ----HPGLQKQDLCQEHHEPLKLFCQKDQSPIC 118
P C +L N+ L + E ++ +K+DLC H E L LFC++D+ IC
Sbjct: 57 PVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVIC 116
Query: 119 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV 178
+C S+EHR H + EE + + KL+ ++ L+++ L+A + W+ +V
Sbjct: 117 WLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQV 176
Query: 179 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ 238
+ R+RI EF+++ L EEQR LQ LE EE++T + E+ L +Q + L+
Sbjct: 177 QTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISD 236
Query: 239 LEERSTQGPLQMLQDM 254
+E RS +++LQDM
Sbjct: 237 VECRSQWSTMELLQDM 252
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,895,501
Number of Sequences: 37866
Number of extensions: 741099
Number of successful extensions: 5187
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 479
Number of HSP's that attempted gapping in prelim test: 3803
Number of HSP's gapped (non-prelim): 1429
length of query: 343
length of database: 18,247,518
effective HSP length: 103
effective length of query: 240
effective length of database: 14,347,320
effective search space: 3443356800
effective search space used: 3443356800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.