Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DCN Sequence: fasta or formatted (172aa) NCBI GI: 19743852
Description:

decorin isoform d precursor

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt prot [359aa] decorin isoform a preproprotein
alt prot [250aa] decorin isoform b precursor
alt prot [212aa] decorin isoform c precursor
alt prot [75aa] decorin isoform e precursor
alt prot [359aa] decorin isoform a preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          6           1
 C cysteine            3.5          6           1
 D aspartate           7.6         13           2
 E glutamate           3.5          6           1
 F phenylalanine       5.2          9           1
 G glycine             6.4         11           1
 H histidine           2.3          4           1
 I isoleucine          4.7          8           2
 K lysine              5.8         10           2
 L leucine            11.0         19           4
 M methionine          1.2          2           1
 N asparagine          5.8         10           3
 P proline             7.6         13           2
 Q glutamine           5.2          9           2
 R arginine            3.5          6           1
 S serine              7.6         13           2
 T threonine           3.5          6           2
 V valine              8.1         14           2
 W tryptophan          1.2          2           1
 Y tyrosine            2.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   decorin isoform d precursor 
DCN                   0.759   decorin isoform c precursor 
DCN                   0.738   decorin isoform b precursor 
DCN                   0.640   decorin isoform a preproprotein 
DCN                   0.640   decorin isoform a preproprotein 
DCN                   0.378   decorin isoform e precursor 
BGN                   0.286   biglycan preproprotein 
ASPN                  0.220   asporin 
SLIT3                 0.119   slit homolog 3 
PXDNL                 0.119   peroxidasin homolog-like 
PXDN                  0.113   peroxidasin 
LRRC3                 0.110   leucine-rich repeat-containing 3 precursor 
SLIT1                 0.107   slit homolog 1 
AMIGO3                0.104   adhesion molecule with Ig-like domain 3 
SLIT2                 0.104   slit homolog 2 
LRRC55                0.098   leucine rich repeat containing 55 
LRRC24                0.095   leucine rich repeat containing 24 
LRTM2                 0.095   leucine-rich repeats and transmembrane domains 2 [Ho...
LGR6                  0.095   leucine-rich repeat-containing G protein-coupled rec...
LRRC3B                0.092   leucine rich repeat containing 3B 
FLRT1                 0.092   fibronectin leucine rich transmembrane protein 1 [Ho...
LRIG1                 0.089   leucine-rich repeats and immunoglobulin-like domains...
TLR10                 0.080   toll-like receptor 10 precursor 
TLR10                 0.080   toll-like receptor 10 precursor 
IGSF10                0.080   immunoglobulin superfamily, member 10 
LGI3                  0.077   leucine-rich repeat LGI family, member 3 
FLRT3                 0.077   fibronectin leucine rich transmembrane protein 3 pre...
FLRT3                 0.077   fibronectin leucine rich transmembrane protein 3 prec...
RTN4RL2               0.077   reticulon 4 receptor-like 2 
LRRC70                0.074   synleurin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press