Guide to the Human Genome
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Name: FLRT3 Sequence: fasta or formatted (649aa) NCBI GI: 7019383
Description:

fibronectin leucine rich transmembrane protein 3 precursor

Referenced in:

Fibronectin Family
Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [649aa] fibronectin leucine rich transmembrane protein 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         32           2
 C cysteine            1.8         12           1
 D aspartate           5.1         33           2
 E glutamate           4.9         32           2
 F phenylalanine       2.8         18           2
 G glycine             4.5         29           2
 H histidine           2.2         14           1
 I isoleucine          6.9         45           2
 K lysine              5.1         33           2
 L leucine            12.3         80           2
 M methionine          1.8         12           1
 N asparagine          7.7         50           3
 P proline             6.5         42           2
 Q glutamine           2.8         18           1
 R arginine            5.1         33           3
 S serine              8.6         56           3
 T threonine           6.9         45           3
 V valine              5.1         33           1
 W tryptophan          1.4          9           1
 Y tyrosine            3.5         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibronectin leucine rich transmembrane protein 3 prec... 
FLRT3                 1.000   fibronectin leucine rich transmembrane protein 3 pre...
FLRT1                 0.554   fibronectin leucine rich transmembrane protein 1 [Ho...
FLRT2                 0.432   fibronectin leucine rich transmembrane protein 2 [Hom...
PODN                  0.082   podocan 
LRRC4C                0.080   netrin-G1 ligand 
LRRC4B                0.078   leucine rich repeat containing 4B 
DCN                   0.078   decorin isoform a preproprotein 
DCN                   0.078   decorin isoform a preproprotein 
ASPN                  0.078   asporin 
LRRC4                 0.077   leucine rich repeat containing 4 
PODNL1                0.075   podocan-like 1 isoform 2 
PODNL1                0.075   podocan-like 1 isoform 1 
FMOD                  0.075   fibromodulin precursor 
OMD                   0.075   osteomodulin 
LRRTM4                0.073   leucine rich repeat transmembrane neuronal 4 isofor...
LRRTM4                0.073   leucine rich repeat transmembrane neuronal 4 isofor...
LRRTM3                0.071   leucine rich repeat transmembrane neuronal 3 
CPN2                  0.070   carboxypeptidase N, polypeptide 2, 83kD 
LRRC15                0.067   leucine rich repeat containing 15 isoform a 
LRRC15                0.067   leucine rich repeat containing 15 isoform b 
ECM2                  0.065   extracellular matrix protein 2 precursor 
VASN                  0.064   slit-like 2 
LRRC70                0.064   synleurin 
BGN                   0.063   biglycan preproprotein 
CHADL                 0.063   chondroadherin-like 
LRIG3                 0.062   leucine-rich repeats and immunoglobulin-like domains...
LRRTM2                0.061   leucine rich repeat transmembrane neuronal 2 
KERA                  0.061   keratocan 
PODNL1                0.061   podocan-like 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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