Guide to the Human Genome
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Name: DCN Sequence: fasta or formatted (212aa) NCBI GI: 19743850
Description:

decorin isoform c precursor

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt prot [359aa] decorin isoform a preproprotein
alt prot [250aa] decorin isoform b precursor
alt prot [172aa] decorin isoform d precursor
alt prot [75aa] decorin isoform e precursor
alt prot [359aa] decorin isoform a preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         12           2
 C cysteine            2.8          6           1
 D aspartate           5.2         11           2
 E glutamate           3.8          8           1
 F phenylalanine       4.2          9           1
 G glycine             7.5         16           2
 H histidine           3.3          7           1
 I isoleucine          4.2          9           2
 K lysine              4.2          9           2
 L leucine            12.7         27           4
 M methionine          0.9          2           1
 N asparagine          6.6         14           3
 P proline             6.6         14           2
 Q glutamine           4.2          9           2
 R arginine            4.2          9           1
 S serine              9.4         20           2
 T threonine           2.8          6           1
 V valine              7.5         16           2
 W tryptophan          0.9          2           1
 Y tyrosine            2.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   decorin isoform c precursor 
DCN                   0.954   decorin isoform b precursor 
DCN                   0.646   decorin isoform a preproprotein 
DCN                   0.646   decorin isoform a preproprotein 
DCN                   0.573   decorin isoform d precursor 
ASPN                  0.367   asporin 
BGN                   0.364   biglycan preproprotein 
DCN                   0.316   decorin isoform e precursor 
SLIT1                 0.119   slit homolog 1 
SLIT3                 0.119   slit homolog 3 
SLIT2                 0.104   slit homolog 2 
KIAA0644              0.085   hypothetical protein LOC9865 
LRRC24                0.085   leucine rich repeat containing 24 
FMOD                  0.085   fibromodulin precursor 
AMIGO2                0.083   adhesion molecule with Ig-like domain 2 
AMIGO2                0.083   adhesion molecule with Ig-like domain 2 
LRRN2                 0.078   leucine rich repeat neuronal 2 
LRRN2                 0.078   leucine rich repeat neuronal 2 
ECM2                  0.078   extracellular matrix protein 2 precursor 
LRFN3                 0.078   leucine rich repeat and fibronectin type III domain ...
LINGO3                0.075   leucine rich repeat and Ig domain containing 3 [Hom...
FLRT3                 0.075   fibronectin leucine rich transmembrane protein 3 pre...
FLRT3                 0.075   fibronectin leucine rich transmembrane protein 3 prec...
GP5                   0.073   glycoprotein V (platelet) 
LRRN3                 0.073   leucine rich repeat neuronal 3 
LRRN3                 0.073   leucine rich repeat neuronal 3 
LRRN3                 0.073   leucine rich repeat neuronal 3 
LRFN1                 0.073   leucine rich repeat and fibronectin type III domain...
LRFN5                 0.073   leucine rich repeat and fibronectin type III domain ...
LGR6                  0.073   leucine-rich repeat-containing G protein-coupled rec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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