Guide to the Human Genome
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Name: DCN Sequence: fasta or formatted (75aa) NCBI GI: 19743854
Description:

decorin isoform e precursor

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt prot [359aa] decorin isoform a preproprotein
alt prot [250aa] decorin isoform b precursor
alt prot [212aa] decorin isoform c precursor
alt prot [172aa] decorin isoform d precursor
alt prot [359aa] decorin isoform a preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          4           1
 C cysteine            6.7          5           1
 D aspartate           8.0          6           2
 E glutamate           5.3          4           1
 F phenylalanine       6.7          5           1
 G glycine             8.0          6           1
 H histidine           1.3          1           1
 I isoleucine          4.0          3           2
 K lysine              1.3          1           1
 L leucine            13.3         10           4
 M methionine          2.7          2           1
 N asparagine          0.0          0           0
 P proline             9.3          7           1
 Q glutamine           6.7          5           2
 R arginine            5.3          4           1
 S serine              6.7          5           1
 T threonine           1.3          1           1
 V valine              6.7          5           2
 W tryptophan          1.3          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   decorin isoform e precursor 
DCN                   0.956   decorin isoform c precursor 
DCN                   0.934   decorin isoform a preproprotein 
DCN                   0.934   decorin isoform a preproprotein 
DCN                   0.934   decorin isoform d precursor 
DCN                   0.919   decorin isoform b precursor 
BGN                   0.287   biglycan preproprotein 
ASPN                  0.140   asporin 
AMIGO3                0.044   adhesion molecule with Ig-like domain 3 
SLIT1                 0.037   slit homolog 1 
PEAR1                 0.029   platelet endothelial aggregation receptor 1 
SLIT3                 0.022   slit homolog 3 
LRTM2                 0.022   leucine-rich repeats and transmembrane domains 2 [Ho...
CXXC1                 0.015   CXXC finger 1 (PHD domain) isoform 1 
CXXC1                 0.015   CXXC finger 1 (PHD domain) isoform 2 
LRRTM2                0.015   leucine rich repeat transmembrane neuronal 2 
CHRD                  0.007   chordin 
SLIT2                 0.007   slit homolog 2 
MAP4K1                0.007   mitogen-activated protein kinase kinase kinase kina...
MAP4K1                0.007   mitogen-activated protein kinase kinase kinase kinase...
CD3EAP                0.007   CD3E antigen, epsilon polypeptide associated protein ...
HNRNPUL1              0.007   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.007   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
LSR                   0.007   LISCH protein isoform 2 
LSR                   0.007   LISCH protein isoform 1 
ILDR2                 0.007   immunoglobulin-like domain containing receptor 2 [Ho...
LRRC55                0.007   leucine rich repeat containing 55 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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