Search of human proteins with 195222740

Search of human proteins with 195222740

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|195222740 placenta-specific 8 [Homo sapiens]
         (115 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|195222740 placenta-specific 8 [Homo sapiens]                       260   2e-70
gi|195222737 placenta-specific 8 [Homo sapiens]                       260   2e-70
gi|7706158 placenta-specific 8 [Homo sapiens]                         260   2e-70
gi|26024195 cornifelin [Homo sapiens]                                  83   4e-17
gi|71274180 PLAC8-like 1 [Homo sapiens]                                71   2e-13
gi|122891874 keratin associated protein 5-5 [Homo sapiens]             35   0.010
gi|123173777 keratin associated protein 5-8 [Homo sapiens]             31   0.18 
gi|60593038 keratin associated protein 5-4 [Homo sapiens]              31   0.18 
gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]            30   0.31 
gi|60593040 keratin associated protein 5-10 [Homo sapiens]             30   0.31 
gi|14269578 metallothionein 4 [Homo sapiens]                           30   0.41 
gi|60593036 keratin associated protein 5-3 [Homo sapiens]              30   0.41 
gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]            30   0.54 
gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]            30   0.54 
gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens]          30   0.54 
gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens]          30   0.54 
gi|60279697 keratin associated protein 5-7 [Homo sapiens]              30   0.54 
gi|239745981 PREDICTED: hypothetical protein XP_002343632 [Homo ...    29   0.92 
gi|10190664 twisted gastrulation [Homo sapiens]                        28   1.6  
gi|5174762 metallothionein 3 [Homo sapiens]                            28   1.6  
gi|63053517 keratin associated protein 10-5 [Homo sapiens]             28   1.6  
gi|183396797 keratin associated protein KRTAP2.1A [Homo sapiens]       28   2.0  
gi|15082232 keratin associated protein 2-4 [Homo sapiens]              28   2.0  
gi|22212927 nuclear transcription factor, X-box binding 1 isofor...    28   2.0  
gi|22212925 nuclear transcription factor, X-box binding 1 isofor...    28   2.0  
gi|21361137 nuclear transcription factor, X-box binding 1 isofor...    28   2.0  
gi|113427417 PREDICTED: similar to keratin associated protein 2-...    28   2.0  
gi|18105007 carbamoylphosphate synthetase 2/aspartate transcarba...    28   2.0  
gi|13569942 keratin associated protein 1-1 [Homo sapiens]              28   2.0  
gi|238859649 keratin associated protein 10-8 [Homo sapiens]            27   2.7  

>gi|195222740 placenta-specific 8 [Homo sapiens]
          Length = 115

 Score =  260 bits (664), Expect = 2e-70
 Identities = 115/115 (100%), Positives = 115/115 (100%)

Query: 1   MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE 60
           MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE
Sbjct: 1   MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE 60

Query: 61  CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF 115
           CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF
Sbjct: 61  CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF 115


>gi|195222737 placenta-specific 8 [Homo sapiens]
          Length = 115

 Score =  260 bits (664), Expect = 2e-70
 Identities = 115/115 (100%), Positives = 115/115 (100%)

Query: 1   MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE 60
           MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE
Sbjct: 1   MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE 60

Query: 61  CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF 115
           CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF
Sbjct: 61  CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF 115


>gi|7706158 placenta-specific 8 [Homo sapiens]
          Length = 115

 Score =  260 bits (664), Expect = 2e-70
 Identities = 115/115 (100%), Positives = 115/115 (100%)

Query: 1   MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE 60
           MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE
Sbjct: 1   MQAQAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE 60

Query: 61  CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF 115
           CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF
Sbjct: 61  CCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAMRTF 115


>gi|26024195 cornifelin [Homo sapiens]
          Length = 112

 Score = 83.2 bits (204), Expect = 4e-17
 Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 4/92 (4%)

Query: 22  QNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNECC----LCGTSVAMRTLYRTR 77
           Q S+W TG+ DC +D  VCLCGTF   CL C+++ D  ECC    L G   ++RT  R R
Sbjct: 20  QLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAPYLPGGLHSIRTGMRER 79

Query: 78  YGIPGSICDDYMATLCCPHCTLCQIKRDINRR 109
           Y I GS+  D+ A   C  C LCQ+ R++  R
Sbjct: 80  YHIQGSVGHDWAALTFCLPCALCQMARELKIR 111


>gi|71274180 PLAC8-like 1 [Homo sapiens]
          Length = 177

 Score = 71.2 bits (173), Expect = 2e-13
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 26  WQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNECC----LCGTSVAMRTLYRTRYGIP 81
           W TG+     D  +C CG FC  CL C +A    EC     L G++ A+R   R R+ I 
Sbjct: 72  WSTGLFSVCRDRRICFCGLFCPMCLECDIARHYGECLCWPLLPGSTFALRIGTRERHKIQ 131

Query: 82  GSICDDYMATLCCPHCTLCQIKRDINRR 109
           G++C+D++A  CC   ++CQ+ R++  R
Sbjct: 132 GTLCEDWLAVHCCWAFSICQVARELKMR 159


>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
          Length = 237

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 31  CDCFSDCGVCLCGTFCFPCLGCQVAADMNECCLC 64
           C CFS CG   C + C+    CQ +  +  CC C
Sbjct: 202 CSCFSGCGSSCCQSSCYKPCCCQSSCCVPVCCQC 235



 Score = 29.6 bits (65), Expect = 0.54
 Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 21/84 (25%)

Query: 31  CDCFSDCGVCLCGTFCFPCLGCQVAADMNECCL------------CGTSVAMRTLYRTRY 78
           C C S CG   C + C     CQ +     CC             CG+S    + Y+   
Sbjct: 163 CCCSSGCGSSCCQSSCCKPYCCQSSCCKPYCCQSSCCKPCSCFSGCGSSCCQSSCYKP-- 220

Query: 79  GIPGSICDDYMATLCCPHCTLCQI 102
                 C    ++ C P C  C+I
Sbjct: 221 ----CCC---QSSCCVPVCCQCKI 237



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 28 TGMCDCFSDCGVCL-CGTFCFPCLGCQVAADMNECC 62
          +G   C S CG C  CG+ C  C GC     +  CC
Sbjct: 33 SGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCC 68


>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
          Length = 187

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 15/76 (19%)

Query: 31  CDCFSDCGVCLC-GTFCFPCLGCQVAADMNECCL---CGTSVAMRTLYRTRYGIPGSICD 86
           C C S CG   C  + C PC  C  ++    CC    CG+S    +  +         C 
Sbjct: 123 CSCSSGCGSSCCQSSCCKPC--CSQSSCCKPCCCSSGCGSSCCQSSCCK-------PCCS 173

Query: 87  DYMATLCCPHCTLCQI 102
              ++ C P C  C+I
Sbjct: 174 --QSSCCVPICCQCKI 187



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/72 (25%), Positives = 23/72 (31%), Gaps = 16/72 (22%)

Query: 31  CDCFSDCGVCLCGTFCFPCLGCQVAADMNECCL-CGTSVAMRTLYRTRYGIPGSICDDYM 89
           C C S CG   C + C     C+     + CC  C  S           G   S C    
Sbjct: 94  CCCSSGCGSSCCQSSC-----CKPCCSQSSCCKPCSCS----------SGCGSSCCQSSC 138

Query: 90  ATLCCPHCTLCQ 101
              CC   + C+
Sbjct: 139 CKPCCSQSSCCK 150


>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
          Length = 288

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 21/76 (27%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 31  CDCFSDCGVCLC-GTFCFPCL---GCQVAADMNECC--LCGTSVAMRTLYRTRYGIPGSI 84
           C C S CG   C  + C PC    GC  +   + CC   C  S   +    +  G   S 
Sbjct: 205 CCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSS-GCGSSC 263

Query: 85  CDDYMATLCCPHCTLC 100
           C       CC   + C
Sbjct: 264 CQSSCCNPCCSQSSCC 279


>gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 188

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 22/91 (24%)

Query: 29  GMCDCFSDCGVCLCG--------------TFCFPCLGCQVAADMNEC-----CL--CGTS 67
           G   C S C   +CG              T CF    CQ       C     CL  C  +
Sbjct: 97  GQTSCGSSCCQPICGSSCCQPCCHPTCYQTICFRTTCCQPTCCHQTCNESSYCLPCCRPT 156

Query: 68  VAMRTLYRTRYGIPGSICDDYMATLCC-PHC 97
               T YRT    P   C     + CC P C
Sbjct: 157 CCQTTCYRTTCCRPSCCCSPCCVSSCCQPSC 187


>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
          Length = 202

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 31  CDCFSDCGVCLCGTFCFPCLGCQVAADMNECC 62
           C C S CG C   + C PC  CQ +  +  CC
Sbjct: 148 CCCSSGCGSCCQSSCCNPCC-CQSSCCVPVCC 178



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)

Query: 31  CDCFSDCGVCLC--GTFCFPCLGCQVAADMNECCLC 64
           C C S C V +C   + C PC  CQ +  +  CC C
Sbjct: 166 CCCQSSCCVPVCCQSSCCKPCC-CQSSCCVPVCCQC 200


>gi|14269578 metallothionein 4 [Homo sapiens]
          Length = 62

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 31 CDCFSDCGVCLCGTFCFPCLGCQVAADMNECCLC 64
          C C S  G+C+CG  C  C  C        CC C
Sbjct: 6  CVCMSG-GICMCGDNC-KCTTCNCKTCRKSCCPC 37


>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
          Length = 238

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 8/73 (10%)

Query: 31  CDCFSDCGVCLCGTFCFPCLGCQVAADMNECC--LCGTSVAMRTLYRTRYGIPGSICDDY 88
           C C S CG   C + C     C+ +   + CC   C  S   +    +  G   S C   
Sbjct: 135 CCCSSGCGSSCCQSSC-----CKPSCSQSSCCKPCCSQSSCCKPCCCSS-GCGSSCCQSS 188

Query: 89  MATLCCPHCTLCQ 101
               CC   + C+
Sbjct: 189 CCKPCCSQSSCCK 201



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 31  CDCFSDCGVCLCGTFCFPCLGCQVAADMNECCLC 64
           C C S CG   C + C      Q +  +  CC C
Sbjct: 203 CCCSSGCGSSCCQSSCCKPCSSQSSCCVPICCQC 236


>gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 188

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 22/91 (24%)

Query: 29  GMCDCFSDCGVCLCG--------------TFCFPCLGCQVAADMNEC-----CL--CGTS 67
           G   C S C   +CG              T CF    CQ       C     CL  C  +
Sbjct: 97  GQTSCGSSCCQPICGSSCCQPCCHPTCYQTTCFRTTCCQPTCCHQTCNESSYCLPCCRPT 156

Query: 68  VAMRTLYRTRYGIPGSICDDYMATLCC-PHC 97
               T YRT    P   C     + CC P C
Sbjct: 157 CCQTTCYRTTCCRPSCCCSPCCVSSCCQPSC 187


>gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 188

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 22/91 (24%)

Query: 29  GMCDCFSDCGVCLCG--------------TFCFPCLGCQVAADMNEC-----CL--CGTS 67
           G   C S C   +CG              T CF    CQ       C     CL  C  +
Sbjct: 97  GQTSCGSSCCQPICGSSCCQPCCHPTCYQTTCFRTTCCQPTCCHQTCNESSYCLPCCRPT 156

Query: 68  VAMRTLYRTRYGIPGSICDDYMATLCC-PHC 97
               T YRT    P   C     + CC P C
Sbjct: 157 CCQTTCYRTTCCRPSCCCSPCCVSSCCQPSC 187


>gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens]
          Length = 531

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 8/71 (11%)

Query: 11  TQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPC--------LGCQVAADMNECC 62
           T P   P P    ++ +T +C+  +DC  C  GT    C         G     +    C
Sbjct: 141 TPPVCDPCPERIQNHPRTQLCEVHTDCWPCQPGTGAPTCPRTPKPTSRGRNPLVEQPRAC 200

Query: 63  LCGTSVAMRTL 73
            CG + A R L
Sbjct: 201 ACGEAFAWRAL 211


>gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens]
          Length = 531

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 8/71 (11%)

Query: 11  TQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPC--------LGCQVAADMNECC 62
           T P   P P    ++ +T +C+  +DC  C  GT    C         G     +    C
Sbjct: 141 TPPVCDPCPERIQNHPRTQLCEVHTDCWPCQPGTGAPTCPRTPKPTSRGRNPLVEQPRAC 200

Query: 63  LCGTSVAMRTL 73
            CG + A R L
Sbjct: 201 ACGEAFAWRAL 211


>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
          Length = 165

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 15/76 (19%)

Query: 31  CDCFSDCGVCLCGTFCFPCLGCQVAADMNECCL--CGTSVAMRTLYRTRYGIPGSICDD- 87
           C C S CG   C + C     CQ +     CC   CG+S               S C+  
Sbjct: 101 CCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQ-----------SSCCNPC 149

Query: 88  -YMATLCCPHCTLCQI 102
              ++ C P C  C+I
Sbjct: 150 CSQSSCCVPVCCQCKI 165


>gi|239745981 PREDICTED: hypothetical protein XP_002343632 [Homo
           sapiens]
          Length = 474

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 7/65 (10%)

Query: 37  CGVCLCGTFCFPCLGCQVAADMNECCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPH 96
           CG       C   L   V A M+ECC+ G S   R   R R      +C    +   C H
Sbjct: 301 CGHPCQSAVCRATLRAAVQASMSECCVPGDSQGSRAGIRVRV-----LCAGRCSGRLCGH 355

Query: 97  CTLCQ 101
             LCQ
Sbjct: 356 --LCQ 358


>gi|10190664 twisted gastrulation [Homo sapiens]
          Length = 223

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 4/35 (11%)

Query: 30 MCDCFSDCGVCLCGTFCFPCLGCQVAADMNECCLC 64
          +C C    G C C   C  CLG    A  +ECC C
Sbjct: 43 LCQCRPGEGNCSCCKECMLCLG----ALWDECCDC 73


>gi|5174762 metallothionein 3 [Homo sapiens]
          Length = 68

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 31 CDCFSDCGVCLCGTFCFPCLGCQVAADMNECCLC 64
          C C S  G C C   C  C GC+  +    CC C
Sbjct: 6  CPCPSG-GSCTCADSC-KCEGCKCTSCKKSCCSC 37


>gi|63053517 keratin associated protein 10-5 [Homo sapiens]
          Length = 271

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 33  CFSD-CGVCLCG---TFCFPCLGCQVAADMNECCLCGTSVAM--RTLYRTRYGIPGSIC- 85
           CF   C V +C    T C     CQ A     CC   +SV++  R + R    +P S C 
Sbjct: 182 CFKPICCVPVCSGASTSCCQQSSCQPACCTTSCCRPSSSVSLLCRPICRPACCVPISSCC 241

Query: 86  ---DDYMATLCCP 95
                Y A+ C P
Sbjct: 242 APASSYQASCCRP 254


>gi|183396797 keratin associated protein KRTAP2.1A [Homo sapiens]
          Length = 128

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 6/56 (10%)

Query: 27  QTGMCD----CFSDCGVCLCGTFCFPCLGCQVAADMNECCL--CGTSVAMRTLYRT 76
           Q G C     C S C   +C   C+    CQ  +  + CC   CG      T  RT
Sbjct: 70  QEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVSVQSPCCRPPCGQPTPCSTTCRT 125


>gi|15082232 keratin associated protein 2-4 [Homo sapiens]
          Length = 128

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 6/56 (10%)

Query: 27  QTGMCD----CFSDCGVCLCGTFCFPCLGCQVAADMNECCL--CGTSVAMRTLYRT 76
           Q G C     C S C   +C   C+    CQ  +  + CC   CG      T  RT
Sbjct: 70  QEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVSVQSPCCRPPCGQPTPCSTTCRT 125


>gi|22212927 nuclear transcription factor, X-box binding 1 isoform 3
           [Homo sapiens]
          Length = 833

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 27/76 (35%)

Query: 17  PGPAPQNSNWQTGMCDC-----------------------FSDCGVCLCGTFCF--PCLG 51
           PGP P    + T  C+C                         +CG   C   C    C  
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQP 522

Query: 52  CQVAADMNECCLCGTS 67
           CQ+   +N+ C CG++
Sbjct: 523 CQII--LNQVCYCGST 536


>gi|22212925 nuclear transcription factor, X-box binding 1 isoform 2
           [Homo sapiens]
          Length = 1024

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 27/76 (35%)

Query: 17  PGPAPQNSNWQTGMCDC-----------------------FSDCGVCLCGTFCF--PCLG 51
           PGP P    + T  C+C                         +CG   C   C    C  
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQP 522

Query: 52  CQVAADMNECCLCGTS 67
           CQ+   +N+ C CG++
Sbjct: 523 CQII--LNQVCYCGST 536


>gi|21361137 nuclear transcription factor, X-box binding 1 isoform 1
           [Homo sapiens]
          Length = 1120

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 27/76 (35%)

Query: 17  PGPAPQNSNWQTGMCDC-----------------------FSDCGVCLCGTFCF--PCLG 51
           PGP P    + T  C+C                         +CG   C   C    C  
Sbjct: 463 PGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQP 522

Query: 52  CQVAADMNECCLCGTS 67
           CQ+   +N+ C CG++
Sbjct: 523 CQII--LNQVCYCGST 536


>gi|113427417 PREDICTED: similar to keratin associated protein 2-4
           [Homo sapiens]
          Length = 128

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 6/56 (10%)

Query: 27  QTGMCD----CFSDCGVCLCGTFCFPCLGCQVAADMNECCL--CGTSVAMRTLYRT 76
           Q G C     C S C   +C   C+    CQ  +  + CC   CG      T  RT
Sbjct: 70  QEGCCRPITCCPSSCTAVVCRPCCWATTCCQPVSVQSPCCRPPCGQPTPCSTTCRT 125


>gi|18105007 carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase [Homo sapiens]
          Length = 2225

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 15/82 (18%)

Query: 4   QAPVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNECCL 63
           +A ++V+T P +G    P +   + G+C  F   G+ +             A  + ECC 
Sbjct: 46  KAQILVLTYPLIGNYGIPPDEMDEFGLCKWFESSGIHV------------AALVVGECCP 93

Query: 64  CGTS-VAMRTLYR--TRYGIPG 82
             +   A RTL+    ++GIPG
Sbjct: 94  TPSHWSATRTLHEWLQQHGIPG 115


>gi|13569942 keratin associated protein 1-1 [Homo sapiens]
          Length = 177

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 19/74 (25%), Positives = 21/74 (28%), Gaps = 8/74 (10%)

Query: 31  CDCFSDCGVCLCGTFCFPCLGCQVAADMNECC---LCGTSVAMRTLYRTRYGIPGSICDD 87
           C     CG   C   C     CQ       CC    C TS      + T     G  CD 
Sbjct: 14  CSTSGTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFPSFST-----GGTCDS 68

Query: 88  YMATLCCPHCTLCQ 101
                 C   + CQ
Sbjct: 69  SCCQPSCCETSCCQ 82


>gi|238859649 keratin associated protein 10-8 [Homo sapiens]
          Length = 259

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 30/111 (27%), Positives = 39/111 (35%), Gaps = 21/111 (18%)

Query: 6   PVVVVTQPGVGPGPAPQNSNWQTGMCDCFSDCGVCLCGTFCFP-------CLG------- 51
           PV  V+       P  Q S+ Q+  C  FS C    C   C         C G       
Sbjct: 131 PVCCVSICSGASSPCCQQSSCQSACCT-FSPCQQACCVPICCKPICCVPVCSGASSLCCQ 189

Query: 52  ---CQVAADMNECCLCGTSVAM--RTLYRTRYGIPGSICDDYMATLCCPHC 97
              CQ A     CC   +SV++  R + R    +P   C    A+ C P C
Sbjct: 190 KSSCQPACCTTSCCRPSSSVSLLCRPVCRPACCVPVPSC-CVPASSCQPSC 239


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.141    0.516 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,556,594
Number of Sequences: 37866
Number of extensions: 252110
Number of successful extensions: 1199
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1065
Number of HSP's gapped (non-prelim): 164
length of query: 115
length of database: 18,247,518
effective HSP length: 85
effective length of query: 30
effective length of database: 15,028,908
effective search space: 450867240
effective search space used: 450867240
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.