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Search of human proteins with 193082993
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|193082993 GTP binding protein 3 (mitochondrial) isoform III
[Homo sapiens]
(471 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|193082993 GTP binding protein 3 (mitochondrial) isoform III [... 939 0.0
gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Ho... 926 0.0
gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [H... 910 0.0
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)... 39 0.013
gi|24308117 GTP binding protein 5 [Homo sapiens] 37 0.030
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi... 37 0.051
gi|93277113 GTP_binding protein [Homo sapiens] 36 0.066
gi|193794819 sialic acid binding Ig-like lectin 6 isoform 2 prec... 35 0.11
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 35 0.19
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 35 0.19
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 35 0.19
gi|24307899 Era-like 1 [Homo sapiens] 35 0.19
gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens] 33 0.56
gi|14150078 hypothetical protein LOC84273 [Homo sapiens] 33 0.73
gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo sa... 32 0.95
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens] 32 1.2
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 32 1.2
gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo... 32 1.2
gi|52630419 sterol regulatory element binding transcription fact... 32 1.6
gi|22547195 sterol regulatory element binding transcription fact... 32 1.6
gi|7262393 ATP-binding cassette, sub-family D (ALD), member 1 [H... 32 1.6
gi|193794821 sialic acid binding Ig-like lectin 6 isoform 1 prec... 32 1.6
gi|193794817 sialic acid binding Ig-like lectin 6 isoform 3 prec... 32 1.6
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 32 1.6
gi|45504357 surfactant associated protein G precursor [Homo sapi... 32 1.6
gi|150378552 sushi domain containing 5 [Homo sapiens] 32 1.6
gi|157042792 coiled-coil domain containing 64B [Homo sapiens] 32 1.6
gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens] 31 2.1
gi|90991702 leucine-rich repeat kinase 1 [Homo sapiens] 31 2.1
gi|223029424 large subunit GTPase 1 [Homo sapiens] 31 2.8
>gi|193082993 GTP binding protein 3 (mitochondrial) isoform III
[Homo sapiens]
Length = 471
Score = 939 bits (2426), Expect = 0.0
Identities = 471/471 (100%), Positives = 471/471 (100%)
Query: 1 MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH
Sbjct: 1 MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
Query: 61 ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA
Sbjct: 61 ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
Query: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL
Sbjct: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
Query: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDA 240
DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDA
Sbjct: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDA 240
Query: 241 RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL 300
RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL
Sbjct: 241 RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL 300
Query: 301 LSDTAGLREGVGPVEQEGVRRARESCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSP 360
LSDTAGLREGVGPVEQEGVRRARESCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSP
Sbjct: 301 LSDTAGLREGVGPVEQEGVRRARESCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSP 360
Query: 361 EGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGC 420
EGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGC
Sbjct: 361 EGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGC 420
Query: 421 LDALGHYKQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 471
LDALGHYKQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK
Sbjct: 421 LDALGHYKQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 471
>gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Homo
sapiens]
Length = 492
Score = 926 bits (2394), Expect = 0.0
Identities = 471/492 (95%), Positives = 471/492 (95%), Gaps = 21/492 (4%)
Query: 1 MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH
Sbjct: 1 MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
Query: 61 ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA
Sbjct: 61 ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
Query: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL
Sbjct: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
Query: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDA 240
DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDA
Sbjct: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDA 240
Query: 241 RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL 300
RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL
Sbjct: 241 RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL 300
Query: 301 LSDTAGLREGVGPVEQEGVRRARE---------------------SCNFLATVVASVGAQ 339
LSDTAGLREGVGPVEQEGVRRARE SCNFLATVVASVGAQ
Sbjct: 301 LSDTAGLREGVGPVEQEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQ 360
Query: 340 SPSDSSQRLLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCG 399
SPSDSSQRLLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCG
Sbjct: 361 SPSDSSQRLLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCG 420
Query: 400 DPSTDPPLLTRARHQHHLQGCLDALGHYKQSKDLALAAEALRVARGHLTRLTGGGGTEEI 459
DPSTDPPLLTRARHQHHLQGCLDALGHYKQSKDLALAAEALRVARGHLTRLTGGGGTEEI
Sbjct: 421 DPSTDPPLLTRARHQHHLQGCLDALGHYKQSKDLALAAEALRVARGHLTRLTGGGGTEEI 480
Query: 460 LDIIFQDFCVGK 471
LDIIFQDFCVGK
Sbjct: 481 LDIIFQDFCVGK 492
>gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [Homo
sapiens]
Length = 524
Score = 910 bits (2351), Expect = 0.0
Identities = 471/524 (89%), Positives = 471/524 (89%), Gaps = 53/524 (10%)
Query: 1 MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH
Sbjct: 1 MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
Query: 61 ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA
Sbjct: 61 ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
Query: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL
Sbjct: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
Query: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQ------------------- 221
DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQ
Sbjct: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQGGSTWWWGRKTPHISPQRL 240
Query: 222 -------------ADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 268
ADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL
Sbjct: 241 PSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 300
Query: 269 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARE---- 324
LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARE
Sbjct: 301 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQ 360
Query: 325 -----------------SCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 367
SCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP
Sbjct: 361 ADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 420
Query: 368 DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY 427
DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY
Sbjct: 421 DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY 480
Query: 428 KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 471
KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK
Sbjct: 481 KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 524
>gi|9506611 guanine nucleotide binding protein-like 3
(nucleolar)-like [Homo sapiens]
Length = 582
Score = 38.5 bits (88), Expect = 0.013
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 246 LRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVD 293
+R+ + V V G PN GKSSL+N L R V PG T+ + E +D
Sbjct: 249 VRTHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLD 296
>gi|24308117 GTP binding protein 5 [Homo sapiens]
Length = 406
Score = 37.4 bits (85), Expect = 0.030
Identities = 48/173 (27%), Positives = 67/173 (38%), Gaps = 34/173 (19%)
Query: 246 LRSGVHVVVTGPPNAGKSSLVNLLSRK-------PVSIVSPEPGTTRDVLETPVDLAGFP 298
L++ H + G PNAGKSSL+ +S P + + P G + +A P
Sbjct: 221 LKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIP 280
Query: 299 VLLSDTAGLREGVGPVEQEGVRRARESCNFLATVV---------------ASVGAQSPSD 343
++ A G+G R E C FL VV +
Sbjct: 281 GIIRG-AHQNRGLG----SAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGL 335
Query: 344 SSQRLLLVLNKSDLLSPEGPGPGPDLPPHL-----LLSCLTGEGLDGLLEALR 391
S++ +V NK DL PE L HL +LS LTGE L+ LL L+
Sbjct: 336 SARPHAIVANKIDL--PEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLK 386
>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
Length = 607
Score = 36.6 bits (83), Expect = 0.051
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 16/136 (11%)
Query: 191 WAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDARRGQRLRSGV 250
W E + + +A GE++ E+G + + + G +R + GV
Sbjct: 307 WREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGP------TQERYKDGV 360
Query: 251 HVV-VTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTR---DVLETP----VDLAG--FPVL 300
+ G PN GKSSL+N L + V VS PG TR TP D G FP L
Sbjct: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
Query: 301 LSDTAGLREGVGPVEQ 316
L + G+ P+ Q
Sbjct: 421 LPRQLQVLAGIYPIAQ 436
>gi|93277113 GTP_binding protein [Homo sapiens]
Length = 334
Score = 36.2 bits (82), Expect = 0.066
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 252 VVVTGPPNAGKSSLVNLLSRK-----PVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTA 305
++V G PN GKSSL+N L R+ + V EPG TR V+ + + ++ P++ L DT
Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM-SKIQVSERPLMFLLDTP 204
Query: 306 GL 307
G+
Sbjct: 205 GV 206
>gi|193794819 sialic acid binding Ig-like lectin 6 isoform 2
precursor [Homo sapiens]
Length = 437
Score = 35.4 bits (80), Expect = 0.11
Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 6 WTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGHALRIL 65
W AA + GPR + + P P +T G+ + RT + + +IL
Sbjct: 182 WMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTI-QLNVSSFKIL 240
Query: 66 TAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPAVVSGV 125
LP+ +LRLL D P A + WF G + ++ P +GV
Sbjct: 241 QNTSSLPVLEGQALRLLCDADGNPP---AHLSWFQGFPA----------LNATPISNTGV 287
Query: 126 LQALGSVPGLRPAEAGEFTRRA 147
L+ +P + AE G+FT RA
Sbjct: 288 LE----LPQVGSAEEGDFTCRA 305
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 34.7 bits (78), Expect = 0.19
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 250 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVD 293
+ V V G PN GKSS++N L ++ + V G TR + P+D
Sbjct: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLD 286
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 34.7 bits (78), Expect = 0.19
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 250 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVD 293
+ V V G PN GKSS++N L ++ + V G TR + P+D
Sbjct: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLD 286
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 34.7 bits (78), Expect = 0.19
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 250 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVD 293
+ V V G PN GKSS++N L ++ + V G TR + P+D
Sbjct: 255 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLD 298
>gi|24307899 Era-like 1 [Homo sapiens]
Length = 437
Score = 34.7 bits (78), Expect = 0.19
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 250 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLRE 309
+ VV+ G PNAGKS+L N L + V VS + TTR + V+L DT G+
Sbjct: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGI-- 171
Query: 310 GVGPVEQ----------EGVRRARESCNFLATVVASVGAQSPSDSSQRLLLVLNK 354
+ P +Q E ++ ES + + +V + + S +LL L K
Sbjct: 172 -ISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSPQLLRCLTK 225
>gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens]
Length = 190
Score = 33.1 bits (74), Expect = 0.56
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 251 HVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTAGLRE 309
HV +TGPP GK++L++ S S P G + + GF V+ LS T G
Sbjct: 4 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 63
Query: 310 GVGPVEQEGVRRAR 323
VG G R R
Sbjct: 64 RVGLEPPPGKRECR 77
>gi|14150078 hypothetical protein LOC84273 [Homo sapiens]
Length = 698
Score = 32.7 bits (73), Expect = 0.73
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 13/63 (20%)
Query: 241 RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPV-----------SIVSPEPGTTRDVLE 289
+R R R V++V G NAGKS+L N L + +SP PGTT ++L+
Sbjct: 332 QRSWRYRGDVYLV--GATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389
Query: 290 TPV 292
P+
Sbjct: 390 FPI 392
>gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo
sapiens]
Length = 740
Score = 32.3 bits (72), Expect = 0.95
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 240 ARRGQRLRSGVHVVVTGPPNAGKSSLVNLLS 270
+R ++ G+H+++TGP GKSSL +LS
Sbjct: 495 SRLNFKVEEGMHLLITGPNGCGKSSLFRILS 525
>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
Length = 832
Score = 32.0 bits (71), Expect = 1.2
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 10 AQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVI-----RTSGPASGHALRI 64
A A GP L + ++ PAP G+ A + G G CG A GP G + RI
Sbjct: 16 AGAGAGPGALPPQPAALPPAPPQGSPCAAAAGGSGACGPATAVAAAGTAEGPGGGGSARI 75
Query: 65 LTAPRDLPLARHA 77
L A A
Sbjct: 76 AVKKAQLRSAPRA 88
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 32.0 bits (71), Expect = 1.2
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 250 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTR 285
+ V G PN GKSS++N L K V V+P G T+
Sbjct: 311 ISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETK 346
>gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo
sapiens]
Length = 738
Score = 32.0 bits (71), Expect = 1.2
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 248 SGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGL 307
SG + GP +GKS++++LL R + P GT + L G + + L
Sbjct: 519 SGSVTALVGPSGSGKSTVLSLLLR----LYDPASGT--------ISLDGHDIRQLNPVWL 566
Query: 308 REGVGPVEQEGVRRARESCNFLATVVASVGAQSPS----DSSQRLLLVLN 353
R +G V QE + SC+ + + GA PS + QR+ V N
Sbjct: 567 RSKIGTVSQEPI---LFSCSIAENI--AYGADDPSSVTAEEIQRVAEVAN 611
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 31.6 bits (70), Expect = 1.6
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 325 SCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGPD---LPPHLLLSCLTGE 381
SCN LA+++ + G SPSD++ + ++ L + GPG LPP + L
Sbjct: 529 SCNPLASLLGARGLPSPSDTTS-VYHSPGRNVLGTESRDGPGWAQWLLPPVVWL------ 581
Query: 382 GLDGLLEALRKELAAVCGDPSTDP---PLLTRARHQHHLQGCLD-ALGHYKQ-SKDLALA 436
L+GLL + L V G+P T P P + RH+ Q LD A G + Q ++ L LA
Sbjct: 582 -LNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRK--QADLDLARGDFAQAAQQLWLA 638
Query: 437 AEAL 440
AL
Sbjct: 639 LRAL 642
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 31.6 bits (70), Expect = 1.6
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 325 SCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGPD---LPPHLLLSCLTGE 381
SCN LA+++ + G SPSD++ + ++ L + GPG LPP + L
Sbjct: 499 SCNPLASLLGARGLPSPSDTTS-VYHSPGRNVLGTESRDGPGWAQWLLPPVVWL------ 551
Query: 382 GLDGLLEALRKELAAVCGDPSTDP---PLLTRARHQHHLQGCLD-ALGHYKQ-SKDLALA 436
L+GLL + L V G+P T P P + RH+ Q LD A G + Q ++ L LA
Sbjct: 552 -LNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRK--QADLDLARGDFAQAAQQLWLA 608
Query: 437 AEAL 440
AL
Sbjct: 609 LRAL 612
>gi|7262393 ATP-binding cassette, sub-family D (ALD), member 1 [Homo
sapiens]
Length = 745
Score = 31.6 bits (70), Expect = 1.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 245 RLRSGVHVVVTGPPNAGKSSLVNLL 269
R+ G+H+++TGP GKSSL +L
Sbjct: 496 RVEEGMHLLITGPNGCGKSSLFRIL 520
>gi|193794821 sialic acid binding Ig-like lectin 6 isoform 1
precursor [Homo sapiens]
Length = 453
Score = 31.6 bits (70), Expect = 1.6
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 32/157 (20%)
Query: 6 WTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSG---------- 55
W AA + GPR + + P P +T G+ + RT
Sbjct: 182 WMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQLNVSYAPQKV 241
Query: 56 -----PASGHALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDC 110
+ A +IL LP+ +LRLL D P A + WF G +
Sbjct: 242 AISIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNPP---AHLSWFQGFPA------ 292
Query: 111 VEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTRRA 147
++ P +GVL+ +P + AE G+FT RA
Sbjct: 293 ----LNATPISNTGVLE----LPQVGSAEEGDFTCRA 321
>gi|193794817 sialic acid binding Ig-like lectin 6 isoform 3
precursor [Homo sapiens]
Length = 353
Score = 31.6 bits (70), Expect = 1.6
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 32/157 (20%)
Query: 6 WTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSG---------- 55
W AA + GPR + + P P +T G+ + RT
Sbjct: 182 WMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQLNVSYAPQKV 241
Query: 56 -----PASGHALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDC 110
+ A +IL LP+ +LRLL D P A + WF G +
Sbjct: 242 AISIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNPP---AHLSWFQGFPA------ 292
Query: 111 VEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTRRA 147
++ P +GVL+ +P + AE G+FT RA
Sbjct: 293 ----LNATPISNTGVLE----LPQVGSAEEGDFTCRA 321
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 17/143 (11%)
Query: 273 PVSIVSPEPGTTRDVLETPVDLAGF-PVLLSDTAGLREGVGPVEQEGVRRARESCNFLAT 331
PV + S E TT + TP D+ VLLS +E G +E+ +
Sbjct: 1186 PVILPSAEQ-TTLEASSTPADMQNILAVLLSQLMKTQEPAGSLEENNSDK---------- 1234
Query: 332 VVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALR 391
+ G Q P + + ++ PE PGP P PP L+ L A+
Sbjct: 1235 ---NSGPQGPRRTPT--MPQEEAAEKRPPEPPGPPPPPPPPPLVEGDLSSAPQELNPAVT 1289
Query: 392 KELAAVCGDPSTDPPLLTRARHQ 414
L + P +PP HQ
Sbjct: 1290 AALLQLLSQPEAEPPGHLPHEHQ 1312
>gi|45504357 surfactant associated protein G precursor [Homo
sapiens]
Length = 78
Score = 31.6 bits (70), Expect = 1.6
Identities = 25/70 (35%), Positives = 31/70 (44%)
Query: 348 LLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPL 407
L LVL + L S G GPG L L S LT + L ++L + PS
Sbjct: 5 LPLVLLLTLLGSSHGTGPGMTLQLKLKESFLTNSSYESSFLELLEKLCLLLHLPSGTSVT 64
Query: 408 LTRARHQHHL 417
L AR QHH+
Sbjct: 65 LHHARSQHHV 74
>gi|150378552 sushi domain containing 5 [Homo sapiens]
Length = 629
Score = 31.6 bits (70), Expect = 1.6
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 266 VNLLSRKPVSIVSPEPGTTRDVLETPVDLA--GFPVLLSDTAGLREGVGPVEQEGVRRAR 323
VN + + P I S TT+ +ET V FP LLS+ +EG GP E +
Sbjct: 500 VNTVKQTPNHIPSTIMATTQPPVETTVPEIQDSFPYLLSEDFFGQEGPGPGASEELHPTL 559
Query: 324 ESC 326
ESC
Sbjct: 560 ESC 562
>gi|157042792 coiled-coil domain containing 64B [Homo sapiens]
Length = 508
Score = 31.6 bits (70), Expect = 1.6
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 13/77 (16%)
Query: 215 EEGVLEQADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPV 274
EE L+ AD+ +LQ L L D +GQ + T P K+S
Sbjct: 281 EESRLQDADVSAASLQSELAHSLDDGDQGQGADAPGDTPTTRSPKTRKAS---------- 330
Query: 275 SIVSPEPGTTRDVLETP 291
SP+P ++LE P
Sbjct: 331 ---SPQPSPPEEILEPP 344
>gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens]
Length = 551
Score = 31.2 bits (69), Expect = 2.1
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 17/90 (18%)
Query: 58 SGHALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHG 117
+G AL IL LP+ +LRLL D S P A + WF G + ++
Sbjct: 244 NGIALEILQNTSYLPVLEGQALRLLCDAPSNPP---AHLSWFQGSPA----------LNA 290
Query: 118 GPAVVSGVLQALGSVPGLRPAEAGEFTRRA 147
P +G+L+ + +R AE G FT RA
Sbjct: 291 TPISNTGILE----LRRVRSAEEGGFTCRA 316
>gi|90991702 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 2015
Score = 31.2 bits (69), Expect = 2.1
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 177 LRQLDGELGHLCRGWA-ETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGA 235
LR+L ELG L W +T +++V A I +EG +A+ L A
Sbjct: 584 LRELPPELGQLGNLWQLDTEDLTISNVPAEIQ-------KEGP--------KAMLSYLRA 628
Query: 236 HLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNLL 269
LR A + + ++ +++ GPP GKS+L+ +L
Sbjct: 629 QLRKAEKCKLMK----MIIVGPPRQGKSTLLEIL 658
>gi|223029424 large subunit GTPase 1 [Homo sapiens]
Length = 658
Score = 30.8 bits (68), Expect = 2.8
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 238 RDARRGQRLRSG-VHVVVTGPPNAGKSSLVN-LLSRKPVSIVSPEPGTTR 285
++ G++++ G + V + G PN GKSS +N ++ K VS VS PG T+
Sbjct: 374 KELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTK 422
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,956,671
Number of Sequences: 37866
Number of extensions: 1100194
Number of successful extensions: 3673
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 3624
Number of HSP's gapped (non-prelim): 98
length of query: 471
length of database: 18,247,518
effective HSP length: 106
effective length of query: 365
effective length of database: 14,233,722
effective search space: 5195308530
effective search space used: 5195308530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.