Guide to the Human Genome
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Name: GNL2 Sequence: fasta or formatted (731aa) NCBI GI: 7019419
Description:

guanine nucleotide binding protein-like 2 (nucleolar)

Referenced in:

Nucleus and Nucleolus
Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         39           2
 C cysteine            0.5          4           1
 D aspartate           5.5         40           2
 E glutamate           9.6         70           5
 F phenylalanine       3.1         23           2
 G glycine             5.2         38           2
 H histidine           1.6         12           1
 I isoleucine          4.9         36           2
 K lysine             10.9         80           3
 L leucine             6.4         47           2
 M methionine          1.8         13           1
 N asparagine          4.5         33           2
 P proline             5.2         38           2
 Q glutamine           5.6         41           2
 R arginine            6.7         49           3
 S serine              7.0         51           3
 T threonine           5.1         37           2
 V valine              7.5         55           3
 W tryptophan          1.1          8           1
 Y tyrosine            2.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein-like 2 (nucleolar)... 
GNL3L                 0.108   guanine nucleotide binding protein-like 3 (nucleolar)...
GNL3                  0.102   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.102   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.102   guanine nucleotide binding protein-like 3 isoform 1 ...
LSG1                  0.047   large subunit GTPase 1 
GNL1                  0.038   guanine nucleotide binding protein-like 1 
LOC100133599          0.022   PREDICTED: hypothetical protein 
LOC100133599          0.020   PREDICTED: hypothetical protein 
TNNT2                 0.020   troponin T type 2, cardiac isoform 4 
CALD1                 0.020   caldesmon 1 isoform 1 
MTG1                  0.020   GTP_binding protein 
LOC283685             0.019   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYST4                 0.019   MYST histone acetyltransferase (monocytic leukemia)...
ATRX                  0.018   transcriptional regulator ATRX isoform 2 
ATRX                  0.018   transcriptional regulator ATRX isoform 1 
IWS1                  0.017   IWS1 homolog 
SR140                 0.017   U2-associated SR140 protein 
PPIG                  0.017   peptidylprolyl isomerase G 
MFAP1                 0.017   microfibrillar-associated protein 1 
EIF5B                 0.017   eukaryotic translation initiation factor 5B 
INCENP                0.017   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.017   inner centromere protein antigens 135/155kDa isofor...
LOC100294088          0.016   PREDICTED: hypothetical protein, partial 
SETD1B                0.016   SET domain containing 1B 
EPS15L1               0.016   epidermal growth factor receptor pathway substrate 1...
KIF21A                0.015   kinesin family member 21A 
TCHH                  0.015   trichohyalin 
TNNT3                 0.015   troponin T3, skeletal, fast isoform 3 
TNNT3                 0.015   troponin T3, skeletal, fast isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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