Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GNL3 Sequence: fasta or formatted (549aa) NCBI GI: 45593130
Description:

guanine nucleotide binding protein-like 3 isoform 1

Referenced in:

Additional Guanine Nucleotide-binding Proteins
Small RNAs in RNA Processing

Other entries for this name:
alt prot [537aa] guanine nucleotide binding protein-like 3 isoform 2
alt prot [537aa] guanine nucleotide binding protein-like 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         35           2
 C cysteine            1.6          9           1
 D aspartate           4.4         24           2
 E glutamate          10.0         55           2
 F phenylalanine       2.9         16           2
 G glycine             5.3         29           2
 H histidine           1.5          8           2
 I isoleucine          4.9         27           2
 K lysine             12.2         67           2
 L leucine             8.7         48           2
 M methionine          1.8         10           1
 N asparagine          4.0         22           2
 P proline             5.3         29           3
 Q glutamine           4.6         25           3
 R arginine            5.5         30           2
 S serine              8.0         44           3
 T threonine           3.8         21           2
 V valine              6.4         35           2
 W tryptophan          0.9          5           1
 Y tyrosine            1.8         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein-like 3 isoform 1 ... 
GNL3                  0.979   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.979   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3L                 0.242   guanine nucleotide binding protein-like 3 (nucleolar)...
GNL2                  0.137   guanine nucleotide binding protein-like 2 (nucleolar)...
MTG1                  0.034   GTP_binding protein 
LSG1                  0.032   large subunit GTPase 1 
GNL1                  0.024   guanine nucleotide binding protein-like 1 
MYO10                 0.022   myosin X 
MAP9                  0.021   aster-associated protein 
LOC100133599          0.020   PREDICTED: hypothetical protein 
LOC100133599          0.019   PREDICTED: hypothetical protein 
MAP1B                 0.019   microtubule-associated protein 1B 
NEFH                  0.018   neurofilament, heavy polypeptide 200kDa 
CHD6                  0.018   chromodomain helicase DNA binding protein 6 
BAT2D1                0.018   HBxAg transactivated protein 2 
LOC100286959          0.016   PREDICTED: hypothetical protein XP_002343921 
SMC1A                 0.016   structural maintenance of chromosomes 1A 
TCHH                  0.016   trichohyalin 
LOC283767             0.016   golgi autoantigen, golgin subfamily a-like 
OFD1                  0.015   oral-facial-digital syndrome 1 
LOC727832             0.015   golgi autoantigen, golgin subfamily a-like 
CALD1                 0.015   caldesmon 1 isoform 1 
EIF5B                 0.015   eukaryotic translation initiation factor 5B 
SFRS12                0.015   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.015   splicing factor, arginine/serine-rich 12 isoform b [...
KIAA1407              0.015   hypothetical protein LOC57577 
CASZ1                 0.014   castor homolog 1, zinc finger isoform a 
SFRS11                0.014   splicing factor, arginine/serine-rich 11 
KIAA1211              0.014   hypothetical protein LOC57482 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press