Guide to the Human Genome
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Name: SFTA2 Sequence: fasta or formatted (78aa) NCBI GI: 45504357
Description:

surfactant associated protein G precursor

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.3          1           1
 C cysteine            2.6          2           1
 D aspartate           0.0          0           0
 E glutamate           5.1          4           1
 F phenylalanine       2.6          2           1
 G glycine             9.0          7           1
 H histidine           7.7          6           2
 I isoleucine          0.0          0           0
 K lysine              3.8          3           1
 L leucine            25.6         20           3
 M methionine          2.6          2           1
 N asparagine          2.6          2           1
 P proline             3.8          3           1
 Q glutamine           2.6          2           1
 R arginine            1.3          1           1
 S serine             14.1         11           2
 T threonine           9.0          7           1
 V valine              5.1          4           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   surfactant associated protein G precursor 
RHCG                  0.053   Rh family, C glycoprotein 
GTPBP3                0.053   GTP binding protein 3 (mitochondrial) isoform III [...
GTPBP3                0.053   GTP binding protein 3 (mitochondrial) isoform V [Ho...
GTPBP3                0.053   GTP binding protein 3 (mitochondrial) isoform IV [H...
MYCBP2                0.023   MYC binding protein 2 
P2RY11                0.023   purinergic receptor P2Y11 
PPAN-P2RY11           0.023   PPAN-P2RY11 protein 
LOC645277             0.008   PREDICTED: hypothetical protein 
LOC645277             0.008   PREDICTED: hypothetical protein 
LOC645277             0.008   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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