Guide to the Human Genome
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Name: GNL1 Sequence: fasta or formatted (607aa) NCBI GI: 38788319
Description:

guanine nucleotide binding protein-like 1

Referenced in:

Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         38           2
 C cysteine            1.5          9           1
 D aspartate           4.9         30           1
 E glutamate          10.7         65           8
 F phenylalanine       2.3         14           1
 G glycine             7.4         45           1
 H histidine           2.6         16           2
 I isoleucine          2.6         16           1
 K lysine              4.3         26           3
 L leucine             9.7         59           2
 M methionine          0.8          5           1
 N asparagine          2.0         12           1
 P proline             7.1         43           2
 Q glutamine           4.9         30           2
 R arginine            8.6         52           3
 S serine              7.7         47           3
 T threonine           4.3         26           2
 V valine              6.9         42           2
 W tryptophan          1.8         11           1
 Y tyrosine            3.5         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein-like 1 
LSG1                  0.121   large subunit GTPase 1 
GNL2                  0.045   guanine nucleotide binding protein-like 2 (nucleolar)...
GNL3L                 0.033   guanine nucleotide binding protein-like 3 (nucleolar)...
GNL3                  0.021   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.021   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.021   guanine nucleotide binding protein-like 3 isoform 1 ...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
ERAL1                 0.015   Era-like 1 
LOC646817             0.014   PREDICTED: similar to SET translocation 
LOC646817             0.014   PREDICTED: similar to SET translocation 
LOC646817             0.014   PREDICTED: similar to SET translocation 
PES1                  0.014   pescadillo homolog 1, containing BRCT domain 
TRIM44                0.014   DIPB protein 
SLC24A1               0.014   solute carrier family 24 (sodium/potassium/calcium ex...
MYST4                 0.014   MYST histone acetyltransferase (monocytic leukemia)...
PELP1                 0.013   proline, glutamic acid and leucine rich protein 1 [...
RPGR                  0.013   retinitis pigmentosa GTPase regulator isoform C [Hom...
C14orf37              0.013   hypothetical protein LOC145407 
DCAF8L2               0.013   DDB1 and CUL4 associated factor 8-like 2 
MYT1                  0.013   myelin transcription factor 1 
ZFHX3                 0.012   AT-binding transcription factor 1 
EHMT2                 0.012   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.012   euchromatic histone-lysine N-methyltransferase 2 is...
CHD3                  0.012   chromodomain helicase DNA binding protein 3 isoform...
RANGAP1               0.012   Ran GTPase activating protein 1 
SRCAP                 0.012   Snf2-related CBP activator protein 
NES                   0.012   nestin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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