Guide to the Human Genome
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Name: GNL3L Sequence: fasta or formatted (582aa) NCBI GI: 9506611
Description:

guanine nucleotide binding protein-like 3 (nucleolar)-like

Referenced in:

Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         41           2
 C cysteine            2.1         12           1
 D aspartate           5.5         32           2
 E glutamate           8.1         47           2
 F phenylalanine       2.2         13           1
 G glycine             5.5         32           2
 H histidine           2.7         16           1
 I isoleucine          3.8         22           1
 K lysine              9.3         54           4
 L leucine             9.1         53           2
 M methionine          2.9         17           2
 N asparagine          4.5         26           1
 P proline             4.8         28           3
 Q glutamine           4.8         28           2
 R arginine            5.7         33           2
 S serine              6.0         35           2
 T threonine           4.6         27           2
 V valine              8.1         47           2
 W tryptophan          0.9          5           1
 Y tyrosine            2.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein-like 3 (nucleolar)... 
GNL3                  0.225   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.225   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.225   guanine nucleotide binding protein-like 3 isoform 1 ...
GNL2                  0.135   guanine nucleotide binding protein-like 2 (nucleolar)...
LSG1                  0.052   large subunit GTPase 1 
MTG1                  0.046   GTP_binding protein 
GNL1                  0.035   guanine nucleotide binding protein-like 1 
WDR87                 0.013   NYD-SP11 protein 
DDX23                 0.013   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
GTPBP10               0.013   GTP-binding protein 10 isoform 2 
TCHH                  0.012   trichohyalin 
GTPBP3                0.012   GTP binding protein 3 (mitochondrial) isoform IV [H...
DRG1                  0.012   developmentally regulated GTP binding protein 1 [Homo...
DEF6                  0.012   differentially expressed in FDCP 6 homolog 
OLA1                  0.012   Obg-like ATPase 1 isoform 1 
GTPBP3                0.012   GTP binding protein 3 (mitochondrial) isoform III [...
GTPBP3                0.012   GTP binding protein 3 (mitochondrial) isoform V [Ho...
DIAPH3                0.011   diaphanous homolog 3 isoform b 
DIAPH3                0.011   diaphanous homolog 3 isoform a 
VRK2                  0.011   vaccinia related kinase 2 isoform 6 
VRK2                  0.011   vaccinia related kinase 2 isoform 2 
VRK2                  0.011   vaccinia related kinase 2 isoform 1 
VRK2                  0.011   vaccinia related kinase 2 isoform 1 
VRK2                  0.011   vaccinia related kinase 2 isoform 1 
CROCC                 0.010   ciliary rootlet coiled-coil 
INCENP                0.010   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.010   inner centromere protein antigens 135/155kDa isofor...
PDE4DIP               0.010   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.010   phosphodiesterase 4D interacting protein isoform 5 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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