PMS1 10431

Name: PMS1	Sequence: fasta or formatted (770aa)		NCBI GI: 189458898
Description: postmeiotic segregation 1 isoform c		Referenced in: DNases, Recombination, and DNA Repair
Other entries for this name: alt prot [893aa] postmeiotic segregation 1 isoform b alt prot [932aa] postmeiotic segregation 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 36 2 C cysteine 1.8 14 2 D aspartate 5.8 45 2 E glutamate 7.4 57 3 F phenylalanine 3.5 27 2 G glycine 4.5 35 1 H histidine 2.7 21 2 I isoleucine 6.6 51 2 K lysine 7.7 59 2 L leucine 9.4 72 2 M methionine 2.2 17 1 N asparagine 7.3 56 3 P proline 3.8 29 1 Q glutamine 3.4 26 1 R arginine 3.1 24 1 S serine 9.9 76 3 T threonine 5.6 43 2 V valine 6.5 50 2 W tryptophan 0.5 4 1 Y tyrosine 3.6 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 postmeiotic segregation 1 isoform c PMS1 0.796 postmeiotic segregation 1 isoform a PMS1 0.732 postmeiotic segregation 1 isoform b PMS2 0.104 PMS2 postmeiotic segregation increased 2 isoform a [H... MLH1 0.070 MutL protein homolog 1 LOC100288713 0.066 PREDICTED: hypothetical protein XP_002342778 LOC730323 0.066 PREDICTED: similar to Postmeiotic segregation incre... MLH3 0.052 mutL homolog 3 isoform 1 MLH3 0.052 mutL homolog 3 isoform 2 SRY 0.014 sex determining region Y LOC646993 0.009 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.009 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.009 PREDICTED: similar to high mobility group box 3 [Ho... HMGB2 0.009 high-mobility group box 2 HMGB2 0.009 high-mobility group box 2 HMGB2 0.009 high-mobility group box 2 SSRP1 0.009 structure specific recognition protein 1 HMGB3 0.009 high-mobility group box 3 LOC729595 0.009 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.009 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.009 PREDICTED: similar to high mobility group box 3 iso... LOC729595 0.009 PREDICTED: similar to high mobility group box 3 iso... SOX2 0.008 sex-determining region Y-box 2 SOX30 0.008 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.008 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX1 0.008 SRY (sex determining region Y)-box 1 TOX2 0.008 TOX high mobility group box family member 2 isoform... TOX2 0.008 TOX high mobility group box family member 2 isoform... TOX2 0.008 TOX high mobility group box family member 2 isoform... TOX2 0.008 TOX high mobility group box family member 2 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.