Guide to the Human Genome
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Name: MLH3 Sequence: fasta or formatted (1429aa) NCBI GI: 91992160
Description:

mutL homolog 3 isoform 2

Referenced in:

DNases, Recombination, and DNA Repair
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [1453aa] mutL homolog 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         67           2
 C cysteine            3.0         43           2
 D aspartate           4.8         69           2
 E glutamate           8.3        119           2
 F phenylalanine       4.5         65           1
 G glycine             4.6         66           2
 H histidine           1.7         25           1
 I isoleucine          3.8         54           2
 K lysine              7.4        106           3
 L leucine             9.2        132           2
 M methionine          2.5         36           2
 N asparagine          5.4         77           2
 P proline             4.1         58           2
 Q glutamine           5.3         76           2
 R arginine            5.1         73           2
 S serine             10.6        152           2
 T threonine           6.4         92           2
 V valine              5.8         83           2
 W tryptophan          0.6          8           1
 Y tyrosine            2.0         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mutL homolog 3 isoform 2 
MLH3                  0.995   mutL homolog 3 isoform 1 
MLH1                  0.030   MutL protein homolog 1 
PMS1                  0.028   postmeiotic segregation 1 isoform c 
PMS1                  0.028   postmeiotic segregation 1 isoform a 
PMS1                  0.024   postmeiotic segregation 1 isoform b 
PMS2                  0.020   PMS2 postmeiotic segregation increased 2 isoform a [H...
LOC100288713          0.012   PREDICTED: hypothetical protein XP_002342778 
LOC730323             0.012   PREDICTED: similar to Postmeiotic segregation incre...
DMP1                  0.008   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.008   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
SETX                  0.005   senataxin 
CCDC99                0.005   coiled-coil domain containing 99 
CEP164                0.004   centrosomal protein 164kDa 
SYCP1                 0.004   synaptonemal complex protein 1 
FNBP4                 0.004   formin binding protein 4 
DSPP                  0.004   dentin sialophosphoprotein preproprotein 
LUZP1                 0.004   leucine zipper protein 1 
LUZP1                 0.004   leucine zipper protein 1 
EXO1                  0.004   exonuclease 1 isoform b 
EXO1                  0.004   exonuclease 1 isoform a 
EXO1                  0.004   exonuclease 1 isoform b 
ZNF514                0.003   zinc finger protein 514 
CCDC123               0.003   coiled-coil domain containing 123 
CCDC88A               0.003   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.003   coiled-coil domain containing 88A isoform 1 
TPR                   0.003   nuclear pore complex-associated protein TPR 
FHAD1                 0.003   forkhead-associated (FHA) phosphopeptide binding do...
RNF111                0.003   ring finger protein 111 
EPS15                 0.003   epidermal growth factor receptor pathway substrate ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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