TMEM67 10007

Name: TMEM67	Sequence: fasta or formatted (995aa)		NCBI GI: 187281580
Description: meckelin isoform 1		Referenced in: Planar Cell Polarity
Other entries for this name: alt prot [914aa] meckelin isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 68 3 C cysteine 3.1 31 1 D aspartate 4.1 41 1 E glutamate 4.6 46 2 F phenylalanine 6.7 67 2 G glycine 6.1 61 2 H histidine 1.8 18 1 I isoleucine 6.6 66 2 K lysine 3.9 39 2 L leucine 10.4 103 3 M methionine 2.4 24 2 N asparagine 5.7 57 2 P proline 3.5 35 2 Q glutamine 4.7 47 2 R arginine 4.2 42 2 S serine 7.8 78 4 T threonine 5.3 53 2 V valine 6.9 69 2 W tryptophan 1.4 14 1 Y tyrosine 3.6 36 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 meckelin isoform 1 TMEM67 0.857 meckelin isoform 2 LAMC1 0.011 laminin, gamma 1 precursor FBN2 0.009 fibrillin 2 precursor FBN3 0.009 fibrillin 3 precursor MEGF9 0.009 multiple EGF-like-domains 9 LAMC3 0.008 laminin, gamma 3 precursor EPHA1 0.008 ephrin receptor EphA1 FBN1 0.007 fibrillin 1 precursor MUC2 0.006 mucin 2 precursor LOC100294420 0.006 PREDICTED: similar to mucin 2 LAMA4 0.006 laminin, alpha 4 isoform 2 precursor LAMA4 0.006 laminin, alpha 4 isoform 1 precursor LAMA4 0.006 laminin, alpha 4 isoform 2 precursor CRB1 0.006 crumbs homolog 1 precursor CRB2 0.006 crumbs homolog 2 LTBP1 0.006 latent transforming growth factor beta binding prote... LTBP1 0.006 latent transforming growth factor beta binding prote... LAMA2 0.006 laminin alpha 2 subunit isoform b precursor LAMA2 0.006 laminin alpha 2 subunit isoform a precursor DNER 0.006 delta-notch-like EGF repeat-containing transmembran... EPHB6 0.006 ephrin receptor EphB6 precursor USH2A 0.005 usherin isoform B USH2A 0.005 usherin isoform A NOTCH1 0.005 notch1 preproprotein TNC 0.005 tenascin C precursor EPHB2 0.005 ephrin receptor EphB2 isoform 1 precursor EPHB2 0.005 ephrin receptor EphB2 isoform 2 precursor STAB1 0.005 stabilin 1 precursor TNXB 0.005 tenascin XB isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.