MUC1 1045

Name: MUC1	Sequence: fasta or formatted (150aa)		NCBI GI: 113206026
Description: mucin 1 isoform 6 precursor		Referenced in: Mucins
Other entries for this name: alt prot [203aa] mucin 1 isoform 5 precursor alt prot [159aa] mucin 1 isoform 7 precursor alt prot [158aa] mucin 1 isoform 8 precursor alt prot [273aa] mucin 1 isoform 1 precursor alt prot [264aa] mucin 1 isoform 2 precursor alt prot [255aa] mucin 1 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 10 2 C cysteine 1.3 2 1 D aspartate 4.0 6 1 E glutamate 5.3 8 1 F phenylalanine 2.7 4 2 G glycine 6.7 10 2 H histidine 2.7 4 1 I isoleucine 1.3 2 1 K lysine 2.7 4 1 L leucine 7.3 11 5 M methionine 2.0 3 1 N asparagine 4.0 6 1 P proline 8.0 12 2 Q glutamine 4.0 6 1 R arginine 4.7 7 2 S serine 14.7 22 2 T threonine 10.7 16 1 V valine 5.3 8 2 W tryptophan 0.0 0 0 Y tyrosine 6.0 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucin 1 isoform 6 precursor MUC1 0.975 mucin 1 isoform 7 precursor MUC1 0.676 mucin 1 isoform 5 precursor MUC1 0.480 mucin 1 isoform 3 precursor MUC1 0.480 mucin 1 isoform 2 precursor MUC1 0.480 mucin 1 isoform 1 precursor MUC1 0.285 mucin 1 isoform 8 precursor MUC5B 0.036 mucin 5, subtype B, tracheobronchial LOC100130988 0.018 hypothetical protein LOC100130988 MUC16 0.014 mucin 16 ZNF423 0.014 zinc finger protein 423 BPTF 0.014 bromodomain PHD finger transcription factor isoform ... BPTF 0.014 bromodomain PHD finger transcription factor isoform ... ZNF609 0.014 zinc finger protein 609 FLG 0.014 filaggrin PHF2 0.014 PHD finger protein 2 MAST4 0.014 microtubule associated serine/threonine kinase fami... KIRREL 0.011 kin of IRRE like VSTM1 0.011 V-set and transmembrane domain containing 1 precurs... ANKS3 0.011 ankyrin repeat and sterile alpha motif domain contai... CXorf66 0.011 hypothetical protein LOC347487 EWSR1 0.011 Ewing sarcoma breakpoint region 1 isoform 1 PAX2 0.011 paired box protein 2 isoform c TBC1D1 0.011 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member... QSER1 0.011 glutamine and serine rich 1 TNFRSF1B 0.007 tumor necrosis factor receptor 2 precursor MYRIP 0.007 myosin VIIA and Rab interacting protein MED1 0.007 mediator complex subunit 1 AFF1 0.007 myeloid/lymphoid or mixed-lineage leukemia trithorax ... MAFB 0.007 transcription factor MAFB Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.